Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_C12
(445 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_48634| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.57
SB_47011| Best HMM Match : Exo_endo_phos (HMM E-Value=2e-14) 30 0.75
SB_5302| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_59616| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.0
SB_4034| Best HMM Match : Exo_endo_phos (HMM E-Value=9.7e-06) 28 3.0
SB_46798| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.0
SB_28739| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.0
SB_11360| Best HMM Match : PDZ (HMM E-Value=0) 27 7.0
SB_58507| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.0
SB_14325| Best HMM Match : Ank (HMM E-Value=3.9e-08) 27 7.0
SB_52593| Best HMM Match : Baculo_PEP_C (HMM E-Value=6.1) 27 9.2
SB_47806| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
SB_45078| Best HMM Match : ABC_tran (HMM E-Value=2.6e-36) 27 9.2
SB_30415| Best HMM Match : M (HMM E-Value=6.5e-05) 27 9.2
SB_26176| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
SB_7928| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
SB_55110| Best HMM Match : Squash (HMM E-Value=0.21) 27 9.2
SB_21003| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
>SB_48634| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1066
Score = 30.7 bits (66), Expect = 0.57
Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 6/94 (6%)
Frame = -1
Query: 430 NNNADPHPL*AGNPSE--RPFGTINPKKK-HPRILSDECARAS*CNPILNKIPPADPIPI 260
N ++DP P + NPS P + NP + P +S+ S PI N P ++P P
Sbjct: 494 NPSSDPSPNPSSNPSSDPSPNPSSNPSSEPSPNPISNPSISTS---PISNPHPSSNPSPH 550
Query: 259 RSDPNAS*LTPLRPS---KSDPNPQSMEQKKILF 167
S +S +P PS SDP+P + F
Sbjct: 551 PSSNPSSEPSP-NPSSNPSSDPSPNPSSDPSLSF 583
>SB_47011| Best HMM Match : Exo_endo_phos (HMM E-Value=2e-14)
Length = 440
Score = 30.3 bits (65), Expect = 0.75
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +2
Query: 311 GRARALIGKDARMFFFWINRTEGSLGWIPRL*RMWICVIID 433
G AR + GKD++ FFW+ +G+ G L W+ +++
Sbjct: 81 GSARMISGKDSKFKFFWMGNEKGTGGVGFLLAEKWVESVVE 121
>SB_5302| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 949
Score = 28.7 bits (61), Expect = 2.3
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 317 ARALIGKDARMFFFWINRTEGSLGWIPRL*RMWI 418
AR ++GKD R FFW + +G+ G L W+
Sbjct: 84 ARMIMGKDTRYKFFWSSNDKGTGGVGILLAEKWV 117
>SB_59616| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2735
Score = 28.3 bits (60), Expect = 3.0
Identities = 13/44 (29%), Positives = 19/44 (43%)
Frame = -1
Query: 226 LRPSKSDPNPQSMEQKKILFIINHYVLRDYVTEMDASVPTGTKC 95
LR DP P + L I H++L+DY +D + C
Sbjct: 1374 LREYVLDPKPSDLRLDPFLRSITHWILKDYNQALDVLIFKPRSC 1417
>SB_4034| Best HMM Match : Exo_endo_phos (HMM E-Value=9.7e-06)
Length = 609
Score = 28.3 bits (60), Expect = 3.0
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +2
Query: 317 ARALIGKDARMFFFWINRTEGSLGWIPRL*RMWI 418
AR ++GKD R FFW +G+ G L W+
Sbjct: 84 ARMIMGKDTRYKFFWSGNDKGTGGVGILLAEKWV 117
>SB_46798| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 68
Score = 27.9 bits (59), Expect = 4.0
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +1
Query: 256 IGSESDRQEGSCLVSDCIRTR 318
I +E+ ++E C+ DC RTR
Sbjct: 42 INTENSQEEAQCMTGDCARTR 62
>SB_28739| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 270
Score = 27.9 bits (59), Expect = 4.0
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +1
Query: 256 IGSESDRQEGSCLVSDCIRTR 318
I +E+ ++E C+ DC RTR
Sbjct: 244 INTENSQEEAQCMTGDCARTR 264
>SB_11360| Best HMM Match : PDZ (HMM E-Value=0)
Length = 625
Score = 27.1 bits (57), Expect = 7.0
Identities = 15/74 (20%), Positives = 32/74 (43%)
Frame = -1
Query: 391 PSERPFGTINPKKKHPRILSDECARAS*CNPILNKIPPADPIPIRSDPNAS*LTPLRPSK 212
PS P P ++ + + N +N +PP P+P S + + L P+
Sbjct: 114 PSPPTLPKQTPPPPTPEVIETAPSPSPGENGEVNHVPPESPVPPASPQSTNSLPKKTPAV 173
Query: 211 SDPNPQSMEQKKIL 170
+ + + E++K++
Sbjct: 174 PEDDDFTREERKVV 187
>SB_58507| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2353
Score = 27.1 bits (57), Expect = 7.0
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +3
Query: 243 ALGSDRIGIGSAGGILFSIGL-H*DARAHSSERM 341
A G+ R G+G G+LFS + H R H +R+
Sbjct: 528 AAGAARDGVGELDGVLFSDAIQHLPRRGHDEQRV 561
>SB_14325| Best HMM Match : Ank (HMM E-Value=3.9e-08)
Length = 342
Score = 27.1 bits (57), Expect = 7.0
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2
Query: 258 DPILMHPDSHLSGQANPIPIHSR 190
DP++ P S LSG+ +P HSR
Sbjct: 14 DPVVKSPSSALSGRLHPYYSHSR 36
>SB_52593| Best HMM Match : Baculo_PEP_C (HMM E-Value=6.1)
Length = 552
Score = 26.6 bits (56), Expect = 9.2
Identities = 23/117 (19%), Positives = 47/117 (40%), Gaps = 2/117 (1%)
Frame = -1
Query: 394 NPSERPFGTINPKKKHPRILSDECARAS*CNPILNKIPPADPIPIRSDPNAS*LTPLRPS 215
NP +NP + R+L+ + NP+ + + ++P+ L P+ +
Sbjct: 236 NPFTSNIKVLNPVTSNVRVLNPVTSYVKVLNPVTSNVKVSNPV----TSYVKVLNPVTSN 291
Query: 214 KSDPNPQSMEQKKILFIINHY--VLRDYVTEMDASVPTGTKCLASQPLPSHHSTHNP 50
+ NP + +K+L + Y VL + + + P + P+ S+ NP
Sbjct: 292 VTVFNPVT-SNEKVLNPVTSYVKVLNPFTSNIKVLNPVTSNVKVLNPVTSYVKVLNP 347
>SB_47806| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 82
Score = 26.6 bits (56), Expect = 9.2
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
Frame = -2
Query: 282 LLPIRFRSDPIL-MHPDSHLSGQANPIPIHSRWNK---RKYFSL*IIMCYVIML 133
LLP+ S+ IL M+P+S+ N IH WN+ Y SL + M + +
Sbjct: 18 LLPMSILSNEILVMYPNSYYIKWLNGSLIHGMWNQIFLGSYISLFVSMPFAYFI 71
>SB_45078| Best HMM Match : ABC_tran (HMM E-Value=2.6e-36)
Length = 972
Score = 26.6 bits (56), Expect = 9.2
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = -1
Query: 112 PTGTKCLASQPLPSHHSTHNPN*EKERSPL 23
P+G + + PLP TH P +RSP+
Sbjct: 630 PSGPSVVVTLPLPPTDHTHTPPPPTDRSPV 659
>SB_30415| Best HMM Match : M (HMM E-Value=6.5e-05)
Length = 1312
Score = 26.6 bits (56), Expect = 9.2
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +3
Query: 189 IDCGLGSDLLGRRGVSQDALGSDRIGIGSAGGILFSIG 302
I+ G+GS +LG G + +GS G+GS G + IG
Sbjct: 1173 IESGMGS-MLGGMGSATAGIGSAHGGVGSMGVMSGGIG 1209
>SB_26176| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 535
Score = 26.6 bits (56), Expect = 9.2
Identities = 11/36 (30%), Positives = 16/36 (44%)
Frame = -3
Query: 128 NGRVRSNGDKVSGQSATTQSPQYPQPELRERTFTVG 21
NGR + D + PQ P+ R+R T+G
Sbjct: 472 NGRASTTSDPIQPLCGPISPPQATTPQPRQRAHTIG 507
>SB_7928| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 324
Score = 26.6 bits (56), Expect = 9.2
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
Frame = -2
Query: 282 LLPIRFRSDPIL-MHPDSHLSGQANPIPIHSRWNK---RKYFSL*IIMCYVIML 133
LLP+ S+ IL M+P+S+ N IH WN+ Y SL + M + +
Sbjct: 18 LLPMSILSNEILVMYPNSYYIKWLNGSLIHGMWNQIFLGSYISLFVSMPFAYFI 71
>SB_55110| Best HMM Match : Squash (HMM E-Value=0.21)
Length = 573
Score = 26.6 bits (56), Expect = 9.2
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = -1
Query: 367 INPKKKHPRILSDECARAS*CNPILNKIPP--ADPIPIRSDPNAS*LTPLRPSKSD 206
+N P+ + C C+P+LN+ P A P+P ++ AS TP S S+
Sbjct: 254 VNDPAPKPQNTNCVCKSTEYCHPVLNRCLPKQAPPLPPKNTNRAS--TPSCTSSSE 307
>SB_21003| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 43
Score = 26.6 bits (56), Expect = 9.2
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = -1
Query: 289 KIPPADPIPIRSDPNAS*LTPLRPSKSDPNPQSMEQK 179
K PP+ P + + S RP + DP+P M +K
Sbjct: 3 KSPPSRPAAVAAHCTQSTAFDDRPGRRDPSPNGMHRK 39
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,860,959
Number of Sequences: 59808
Number of extensions: 361471
Number of successful extensions: 1070
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 952
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1064
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 871599479
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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