Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_C12
(445 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g62970.1 68414.m07110 DNAJ heat shock N-terminal domain-conta... 30 0.61
At1g67420.1 68414.m07674 24 kDa vacuolar protein, putative simil... 29 1.1
At1g35530.1 68414.m04411 DEAD/DEAH box helicase, putative low si... 29 1.4
At1g02813.1 68414.m00240 expressed protein contains Pfam profile... 29 1.9
At2g30370.1 68415.m03696 allergen-related weak similarity to pol... 28 3.3
At1g09090.2 68414.m01015 respiratory burst oxidase protein B (Rb... 28 3.3
At3g25500.1 68416.m03171 formin homology 2 domain-containing pro... 27 4.3
At5g51060.1 68418.m06329 respiratory burst oxidase protein C (Rb... 27 5.7
At3g10800.1 68416.m01300 bZIP transcription factor family protei... 27 5.7
At2g32870.1 68415.m04030 meprin and TRAF homology domain-contain... 27 5.7
At1g79950.1 68414.m09344 helicase-related similar to BRCA1-bindi... 27 5.7
At1g64060.1 68414.m07256 respiratory burst oxidase protein F (Rb... 27 5.7
At5g11110.1 68418.m01297 sucrose-phosphate synthase, putative si... 27 7.5
At5g07390.1 68418.m00846 respiratory burst oxidase protein A (Rb... 27 7.5
At4g18670.1 68417.m02762 leucine-rich repeat family protein / ex... 27 7.5
At3g28790.1 68416.m03593 expressed protein 27 7.5
At1g49490.1 68414.m05547 leucine-rich repeat family protein / ex... 27 7.5
At5g62610.1 68418.m07857 basic helix-loop-helix (bHLH) family pr... 26 10.0
At5g53870.1 68418.m06701 plastocyanin-like domain-containing pro... 26 10.0
At5g47910.1 68418.m05918 respiratory burst oxidase protein D (Rb... 26 10.0
At4g18820.1 68417.m02778 expressed protein 26 10.0
At4g11230.1 68417.m01819 respiratory burst oxidase, putative / N... 26 10.0
At4g02360.1 68417.m00320 expressed protein contains Pfam profile... 26 10.0
At1g79020.1 68414.m09214 transcription factor-related similar to... 26 10.0
>At1g62970.1 68414.m07110 DNAJ heat shock N-terminal
domain-containing protein low similarity to AHM1
[Triticum aestivum] GI:6691467; contains Pfam profile
PF00226: DnaJ domain
Length = 797
Score = 30.3 bits (65), Expect = 0.61
Identities = 16/84 (19%), Positives = 37/84 (44%)
Frame = -1
Query: 427 NNADPHPL*AGNPSERPFGTINPKKKHPRILSDECARAS*CNPILNKIPPADPIPIRSDP 248
+N+ P P+ + + +PF +K +L + ++ S P+ + ++P P+
Sbjct: 400 SNSKPFPMSQSSQNSKPFPVSQSSQKSKPLLVSQSSQRSKPLPVSQSLQNSNPFPVSQPS 459
Query: 247 NAS*LTPLRPSKSDPNPQSMEQKK 176
+ S P+ + NP + Q +
Sbjct: 460 SNSKPFPVSQPQPASNPFPVSQPR 483
>At1g67420.1 68414.m07674 24 kDa vacuolar protein, putative similar
to 24 kDa vacuolar protein VP24 [Ipomoea batatas]
gi|5821406|dbj|BAA83809
Length = 873
Score = 29.5 bits (63), Expect = 1.1
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +3
Query: 348 CFFFGLIVPKGLSDGFPAYKGCGSALLL 431
C FFGL++P+ +SD ++G S ++
Sbjct: 456 CSFFGLLIPRAISDRVSHFQGVSSKKIM 483
>At1g35530.1 68414.m04411 DEAD/DEAH box helicase, putative low
similarity to RNA helicase/RNAseIII CAF protein
[Arabidopsis thaliana] GI:6102610; contains Pfam profiles
PF00270: DEAD/DEAH box helicase, PF00271: Helicase
conserved C-terminal domain
Length = 1324
Score = 29.1 bits (62), Expect = 1.4
Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 5/63 (7%)
Frame = -1
Query: 232 TPLRPSKSDPNPQSMEQKKILFIINHYVLRDYVTEM-----DASVPTGTKCLASQPLPSH 68
+P+R S S ++K+ N Y + TE+ + + GT+CLA P+P
Sbjct: 912 SPMRFSNELAGESSFPERKVQHKCNDYNIVSTTTELRTPQKEVGLANGTECLAVSPIPED 971
Query: 67 HST 59
T
Sbjct: 972 WRT 974
>At1g02813.1 68414.m00240 expressed protein contains Pfam profile
PF04398: Protein of unknown function, DUF538
Length = 149
Score = 28.7 bits (61), Expect = 1.9
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +2
Query: 302 IALGRARALIGKDARMFFFWINRTEGS 382
I GR LIG ++ FFWIN +E S
Sbjct: 82 ITRGRVIRLIGVSVKVLFFWINISEVS 108
>At2g30370.1 68415.m03696 allergen-related weak similarity to pollen
major allergen 2 protein [Juniperus ashei]
gi|9955725|emb|CAC05582
Length = 230
Score = 27.9 bits (59), Expect = 3.3
Identities = 11/35 (31%), Positives = 16/35 (45%)
Frame = -1
Query: 346 PRILSDECARAS*CNPILNKIPPADPIPIRSDPNA 242
P S +C R + C P+ +PP P+ P A
Sbjct: 184 PPRCSSKCGRCTPCKPVHVPVPPGTPVTAEYYPEA 218
>At1g09090.2 68414.m01015 respiratory burst oxidase protein B
(RbohB) / NADPH oxidase identical to respiratory burst
oxidase protein B from Arabidopsis thaliana [gi:3242783]
Length = 843
Score = 27.9 bits (59), Expect = 3.3
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +2
Query: 344 RMFFFWINRTEGSLGW 391
R +F+W+ R +GSL W
Sbjct: 709 RAYFYWVTREQGSLEW 724
>At3g25500.1 68416.m03171 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 1051
Score = 27.5 bits (58), Expect = 4.3
Identities = 16/34 (47%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = -1
Query: 301 PILNKIPPADPIP-IRSDPNAS*LTPLRPSKSDP 203
P L K+P + P SDPNAS PL PS P
Sbjct: 44 PPLPKLPFSSTTPPSSSDPNASPFFPLYPSSPPP 77
>At5g51060.1 68418.m06329 respiratory burst oxidase protein C
(RbohC) / NADPH oxidase nearly identical to respiratory
burst oxidase protein C from Arabidopsis thaliana
[gi:3242785]
Length = 905
Score = 27.1 bits (57), Expect = 5.7
Identities = 7/20 (35%), Positives = 12/20 (60%)
Frame = +2
Query: 344 RMFFFWINRTEGSLGWIPRL 403
R +F+W+ R +GS W +
Sbjct: 771 RAYFYWVTREQGSFDWFKNI 790
>At3g10800.1 68416.m01300 bZIP transcription factor family protein
contains Pfam profile: PF00170 bZIP transcription
factor; contains similarity to TGACG-sequence specific
DNA-binding protein TGA-1B (HSBF) GB:P14233 [Nicotiana
tabacum]
Length = 675
Score = 27.1 bits (57), Expect = 5.7
Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
Frame = +3
Query: 198 GLGSDLLGRRGVSQDALGSDRIGIG---SAGGILFSIGLH*DARAHSSERMRGCFFFGLI 368
G GSD+ G+S+ + S RI G S GG+ ++ + R S F L
Sbjct: 378 GDGSDVRRNSGISEGNIHSSRISHGERDSCGGVDYNAHPKVEGRPSSLSNASDPLFASLY 437
Query: 369 VPKGLSDGFPAYKG 410
VP+ +DG G
Sbjct: 438 VPR--NDGLVKIDG 449
>At2g32870.1 68415.m04030 meprin and TRAF homology domain-containing
protein / MATH domain-containing protein similar to
ubiquitin-specific protease 12 [Arabidopsis thaliana]
GI:11993471; contains Pfam profile PF00917: MATH domain
Length = 416
Score = 27.1 bits (57), Expect = 5.7
Identities = 17/47 (36%), Positives = 22/47 (46%)
Frame = -1
Query: 268 IPIRSDPNAS*LTPLRPSKSDPNPQSMEQKKILFIINHYVLRDYVTE 128
IPI S PN T RP K NP ++ I+ I+ L D + E
Sbjct: 73 IPISSHPN----TNYRPKKRKKNPPTVYLTTIILIMGLLSLEDTIKE 115
>At1g79950.1 68414.m09344 helicase-related similar to BRCA1-binding
helicase-like protein BACH1 (GI:13661819) Homo
sapiens].; contains similarity to helicase-like protein
NHL GI:6969265 from (Homo sapiens)
Length = 1040
Score = 27.1 bits (57), Expect = 5.7
Identities = 16/58 (27%), Positives = 27/58 (46%)
Frame = +3
Query: 231 VSQDALGSDRIGIGSAGGILFSIGLH*DARAHSSERMRGCFFFGLIVPKGLSDGFPAY 404
+S + L + + G +G +L S + D + E F +VP+GL FP+Y
Sbjct: 516 ISSNQLWAGVVSTGPSGYVLNSSYRNRDVPEYKQELGNAIVNFSRVVPEGLLIFFPSY 573
>At1g64060.1 68414.m07256 respiratory burst oxidase protein F
(RbohF) (RbohAp108) / NADPH oxidase identical to
cytochrome b245 beta chain homolog RbohAp108
[GI:2654868], respiratory burst oxidase protein F
[gi:3242456], from Arabidopsis thaliana
Length = 944
Score = 27.1 bits (57), Expect = 5.7
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +2
Query: 320 RALIGKDARMFFFWINRTEGSLGW 391
R I K +F+W+ R +GS W
Sbjct: 802 RKRILKTTNAYFYWVTREQGSFDW 825
>At5g11110.1 68418.m01297 sucrose-phosphate synthase, putative
similar to sucrose-phosphate synthase isoform 1, Citrus
unshiu, PIR:S72648
Length = 894
Score = 26.6 bits (56), Expect = 7.5
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = +3
Query: 168 KSIFFCSIDCGLGSDLLGRRGVSQDALGSDRIGIGSAGGILFSIGL 305
K+IF S+DC SDLL V + + D G GS+ G + S +
Sbjct: 611 KNIFVISVDCSATSDLL---AVVKTVI--DAAGRGSSTGFILSTSM 651
>At5g07390.1 68418.m00846 respiratory burst oxidase protein A
(RbohA) / NADPH oxidase identical to respiratory burst
oxidase protein A from Arabidopsis thaliana [gi:3242781]
Length = 902
Score = 26.6 bits (56), Expect = 7.5
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = +2
Query: 344 RMFFFWINRTEGSLGW 391
R +F+W+ R +GS W
Sbjct: 768 RAYFYWVTREQGSFDW 783
>At4g18670.1 68417.m02762 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 839
Score = 26.6 bits (56), Expect = 7.5
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = -1
Query: 301 PILNKIPPADPIPIRSDPNAS*LTPLRPSKSDPNPQS 191
PI PP+ P S P+ S TP P S P P +
Sbjct: 530 PITVPSPPSTPTSPGSPPSPSSPTPSSPIPSPPTPST 566
>At3g28790.1 68416.m03593 expressed protein
Length = 608
Score = 26.6 bits (56), Expect = 7.5
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = -1
Query: 283 PPADPIPIRSDPNAS*LTPLRPSKSDPNPQS 191
P P P S P S TP P+ S P P +
Sbjct: 275 PSGSPTPTPSTPTPSTPTPSTPTPSTPTPST 305
>At1g49490.1 68414.m05547 leucine-rich repeat family protein /
extensin family protein contains similarity to disease
resistance protein GI:3894383 from [Lycopersicon
esculentum]; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 847
Score = 26.6 bits (56), Expect = 7.5
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = -1
Query: 301 PILNKIPPADPIPIRSDPNAS*LTPLRPSKSDPNP 197
P+ + PP+ P P+ S P +P P S P P
Sbjct: 578 PVASPPPPSPPPPVHSPPPPPVFSPPPPVFSPPPP 612
>At5g62610.1 68418.m07857 basic helix-loop-helix (bHLH) family
protein contains Pfam profile: PF00010 helix-loop-helix
DNA-binding domain
Length = 281
Score = 26.2 bits (55), Expect = 10.0
Identities = 15/58 (25%), Positives = 28/58 (48%)
Frame = -3
Query: 221 AKQIRSQSTVDGTKENTFHYKSLCAT*LCYRNGRVRSNGDKVSGQSATTQSPQYPQPE 48
+K + S S+ + KE+ + LC + +G +R G+ SG + + Q +PE
Sbjct: 88 SKMVSSSSSGNELKESGDKKRKLCGSESGNGDGSMRPEGETSSGGGGSKATEQKNKPE 145
>At5g53870.1 68418.m06701 plastocyanin-like domain-containing
protein contains similarity to SP|Q02917 Early nodulin
55-2 precursor {Glycine max}; PF02298: Plastocyanin-like
domain
Length = 370
Score = 26.2 bits (55), Expect = 10.0
Identities = 20/92 (21%), Positives = 31/92 (33%)
Frame = -1
Query: 283 PPADPIPIRSDPNAS*LTPLRPSKSDPNPQSMEQKKILFIINHYVLRDYVTEMDASVPTG 104
PP PI P S S + P+P + +H + A P+
Sbjct: 181 PPKSSSPISHTPALSPSHATSHSPATPSPSPKSPSPVSHSPSHSPAHT-PSHSPAHTPSH 239
Query: 103 TKCLASQPLPSHHSTHNPN*EKERSPLERTAH 8
+ A P+H +H+P SP +H
Sbjct: 240 SPAHAPSHSPAHAPSHSPAHAPSHSPAHSPSH 271
>At5g47910.1 68418.m05918 respiratory burst oxidase protein D
(RbohD) / NADPH oxidase identical to respiratory burst
oxidase protein D from Arabidopsis thaliana [gi:3242789]
Length = 921
Score = 26.2 bits (55), Expect = 10.0
Identities = 7/19 (36%), Positives = 12/19 (63%)
Frame = +2
Query: 335 KDARMFFFWINRTEGSLGW 391
K + +F+W+ R +GS W
Sbjct: 784 KTRKAYFYWVTREQGSFEW 802
>At4g18820.1 68417.m02778 expressed protein
Length = 1111
Score = 26.2 bits (55), Expect = 10.0
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +3
Query: 186 SIDCGLGSDLLGRRGVSQDALGSDRIGIGS 275
S+ CG+ GR+G + + GSD++ I S
Sbjct: 323 SLSCGMSDSKGGRKGETNERNGSDKMMIQS 352
>At4g11230.1 68417.m01819 respiratory burst oxidase, putative /
NADPH oxidase, putative similar to respiratory burst
oxidase homolog F [gi:3242456], RbohAp108 [gi:2654868]
from Arabidopsis thaliana, respiratory burst oxidase
homolog [GI:16549087] from Solanum tuberosum; contains
Pfam profile PF01794 Ferric reductase like transmembrane
component
Length = 941
Score = 26.2 bits (55), Expect = 10.0
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +2
Query: 299 RIALGRARALIGKDARMFFFWINRTEGSLGWIPRL 403
RI + + L K+A +F+W+ R +GS W +
Sbjct: 794 RIPQTQRKTLNTKNA--YFYWVTREQGSFDWFKEI 826
>At4g02360.1 68417.m00320 expressed protein contains Pfam profile
PF04398: Protein of unknown function, DUF538
Length = 154
Score = 26.2 bits (55), Expect = 10.0
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +2
Query: 302 IALGRARALIGKDARMFFFWINRTEGSL 385
I+ G + L G ++ FFW+N E SL
Sbjct: 86 ISPGHVKNLKGVSVKVLFFWVNIAEVSL 113
>At1g79020.1 68414.m09214 transcription factor-related similar to
enhancer of polycomb (GI:3757890) [Drosophila
melanogaster]; similar to enhancer of polycomb
(GI:11907923) [Homo sapiens]
Length = 453
Score = 26.2 bits (55), Expect = 10.0
Identities = 21/79 (26%), Positives = 34/79 (43%), Gaps = 6/79 (7%)
Frame = -1
Query: 391 PSERPFGTINPKKKHPRILSDECARAS*CNPILNKIPPADPIPIRSDP------NAS*LT 230
PS R F +N HP + E R + L+++ P +P+ + + P A+ +
Sbjct: 339 PSSR-FTNLNLNASHPGGIKQEVRRRQSQHGWLHRLDPNEPVMLFTKPLVPDKLAAAGIV 397
Query: 229 PLRPSKSDPNPQSMEQKKI 173
P P S P S Q +I
Sbjct: 398 PPTPDSSPGQPPSRFQGRI 416
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,105,784
Number of Sequences: 28952
Number of extensions: 251598
Number of successful extensions: 723
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 679
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 719
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 712739520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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