Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_C10
         (664 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A1BY90 Cluster: Coat protein; n=5; Cowpea mild mottle v...    35   1.5  
UniRef50_Q6YI20 Cluster: HsPet8; n=4; Ascomycota|Rep: HsPet8 - E...    33   6.1  
UniRef50_Q0UY39 Cluster: Predicted protein; n=1; Phaeosphaeria n...    33   6.1  

>UniRef50_A1BY90 Cluster: Coat protein; n=5; Cowpea mild mottle
           virus|Rep: Coat protein - Cowpea mild mottle virus
          Length = 288

 Score = 35.1 bits (77), Expect = 1.5
 Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
 Frame = -1

Query: 463 TQDW-GELRIPSSVVFRLRRQISTLLRLGYLYEDISWNFFCTDCQQPIVTSEW 308
           T DW G   +  SV+  LR+  +TL R+  LY  I+WNF  T    P   S+W
Sbjct: 153 TFDWKGGSILSDSVIAALRKDDNTLRRVCRLYAPITWNFMLTHKAPP---SDW 202


>UniRef50_Q6YI20 Cluster: HsPet8; n=4; Ascomycota|Rep: HsPet8 -
           Eremothecium sinecaudum
          Length = 224

 Score = 33.1 bits (72), Expect = 6.1
 Identities = 19/62 (30%), Positives = 29/62 (46%)
 Frame = +2

Query: 134 CKMAVPTVTLNELSDATQDNTINPSPKKVLKNPERLHGPAIRKGNTVHYWQQVVLRELPF 313
           C + VP   + +    TQ +  N S K +   P   +G  IR+ N    W   ++RE+PF
Sbjct: 74  CLVRVPAEVVKQ---RTQTHKSNSSIKTLQALPRNENGEGIRR-NLYRGWWTTIMREIPF 129

Query: 314 RC 319
            C
Sbjct: 130 TC 131


>UniRef50_Q0UY39 Cluster: Predicted protein; n=1; Phaeosphaeria
           nodorum|Rep: Predicted protein - Phaeosphaeria nodorum
           (Septoria nodorum)
          Length = 186

 Score = 33.1 bits (72), Expect = 6.1
 Identities = 17/47 (36%), Positives = 25/47 (53%)
 Frame = +1

Query: 193 HHQPKP*EGSKES*TTTWTCNTERKHRTLLAASRPSGATIQMSRSVA 333
           H  P P      + ++++T   E  HR L AA+ PSG T  ++RS A
Sbjct: 83  HPAPTPASALAAAQSSSFTWGHEPDHRPLTAAALPSGPTFTLNRSAA 129


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 601,553,062
Number of Sequences: 1657284
Number of extensions: 11404429
Number of successful extensions: 29339
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 28493
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29332
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 50413227838
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)