Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_C10
         (664 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U23529-6|AAL32208.1|  384|Caenorhabditis elegans Hypothetical pr...    31   0.96 
Z93393-19|CAC70107.3|  971|Caenorhabditis elegans Hypothetical p...    28   5.1  
Z83229-4|CAD89896.1|  971|Caenorhabditis elegans Hypothetical pr...    28   5.1  
Z81568-11|CAB04593.1|  681|Caenorhabditis elegans Hypothetical p...    28   6.8  

>U23529-6|AAL32208.1|  384|Caenorhabditis elegans Hypothetical
           protein C15B12.1 protein.
          Length = 384

 Score = 30.7 bits (66), Expect = 0.96
 Identities = 16/60 (26%), Positives = 27/60 (45%)
 Frame = +2

Query: 320 HDRLLTIGTEEVPRNIFVKISETEKSGDLTPQSKNDGTWDPKFTPVLXFKVRTLXXXIEY 499
           HDR + +   E+  N+FV  +++  S      +   G W  KF P L F +  +   + Y
Sbjct: 165 HDREIVLSHSEISNNLFVTTNKSRYSSKKIIFTV--GCWITKFLPDLKFNIEPISISVCY 222


>Z93393-19|CAC70107.3|  971|Caenorhabditis elegans Hypothetical
           protein Y48E1B.14a protein.
          Length = 971

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = -1

Query: 430 SVVFRLRRQISTLLRLGYLYEDISWNFFCTDCQQP 326
           SV+  + R+  ++  L YL + I W+ FC D   P
Sbjct: 855 SVLGGVFRKCLSVANLTYLVQHIQWSLFCNDAPWP 889


>Z83229-4|CAD89896.1|  971|Caenorhabditis elegans Hypothetical
           protein Y48E1B.14a protein.
          Length = 971

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = -1

Query: 430 SVVFRLRRQISTLLRLGYLYEDISWNFFCTDCQQP 326
           SV+  + R+  ++  L YL + I W+ FC D   P
Sbjct: 855 SVLGGVFRKCLSVANLTYLVQHIQWSLFCNDAPWP 889


>Z81568-11|CAB04593.1|  681|Caenorhabditis elegans Hypothetical
           protein K08E3.6 protein.
          Length = 681

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
 Frame = -2

Query: 417 DCG-VKSPLFSVSDIFTKIFLGTSSVPIVSNR 325
           DC    + LF   D++ + FLGTS+V + SN+
Sbjct: 599 DCHRAMTALFEFDDVYWQRFLGTSAVSMASNQ 630


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,710,440
Number of Sequences: 27780
Number of extensions: 265967
Number of successful extensions: 731
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 703
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 730
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1486926498
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)