Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_C09
         (550 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A2QF88 Cluster: Contig An02c0450, complete genome; n=1;...    34   2.5  
UniRef50_UPI000038D1FE Cluster: COG0697: Permeases of the drug/m...    33   4.4  
UniRef50_UPI0000DC1A6C Cluster: UPI0000DC1A6C related cluster; n...    32   7.6  

>UniRef50_A2QF88 Cluster: Contig An02c0450, complete genome; n=1;
           Aspergillus niger|Rep: Contig An02c0450, complete genome
           - Aspergillus niger
          Length = 960

 Score = 33.9 bits (74), Expect = 2.5
 Identities = 14/27 (51%), Positives = 19/27 (70%)
 Frame = -1

Query: 112 SKRAAGPPLRLQVLAPRANDRLAPPPP 32
           S+ AAG P+R Q  +P+ +DR A PPP
Sbjct: 833 SQEAAGSPVRAQARSPQRDDRRAMPPP 859


>UniRef50_UPI000038D1FE Cluster: COG0697: Permeases of the
           drug/metabolite transporter (DMT) superfamily; n=1;
           Nostoc punctiforme PCC 73102|Rep: COG0697: Permeases of
           the drug/metabolite transporter (DMT) superfamily -
           Nostoc punctiforme PCC 73102
          Length = 779

 Score = 33.1 bits (72), Expect = 4.4
 Identities = 17/50 (34%), Positives = 24/50 (48%)
 Frame = -1

Query: 181 EGLICEFFSLFTNKYQFTISMFTSKRAAGPPLRLQVLAPRANDRLAPPPP 32
           E ++ EF +    + + TI   + K AAG P  LQ   P  N+   P PP
Sbjct: 182 ETILAEFVNRLHGELEKTIEETSRKPAAGTPTVLQFTEPEKNNSSEPSPP 231


>UniRef50_UPI0000DC1A6C Cluster: UPI0000DC1A6C related cluster; n=1;
           Rattus norvegicus|Rep: UPI0000DC1A6C UniRef100 entry -
           Rattus norvegicus
          Length = 589

 Score = 32.3 bits (70), Expect = 7.6
 Identities = 19/42 (45%), Positives = 20/42 (47%)
 Frame = -2

Query: 144 INTNLPYQCLQANGPRGPPSASKFWRPGRMTGLPPPLPEQAL 19
           I   LP Q L    P GPP A     PG  TGLP P P  +L
Sbjct: 412 IRRPLP-QLLLPGPPPGPPPAPPLQSPGPPTGLPGPPPGSSL 452


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 479,669,209
Number of Sequences: 1657284
Number of extensions: 9291852
Number of successful extensions: 29287
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 27441
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29217
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 35822246242
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)