Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_C09
         (550 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    22   4.1  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   9.4  
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    21   9.4  
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    21   9.4  

>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 9/33 (27%), Positives = 16/33 (48%)
 Frame = +1

Query: 220 SYIMKIKNKSL*IQRFGICVDESVNQDNSF*IY 318
           +++  +   S+ I +F  C D   N DN   +Y
Sbjct: 236 NFLFVLSTFSICITQFYYCYDSGFNSDNLTDVY 268


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -2

Query: 165 NFSLCLPINTNLPYQCLQAN 106
           N  L LPI + L + C + N
Sbjct: 210 NLDLVLPIYSQLVFMCKKIN 229


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = -1

Query: 73  LAPRANDRLAPPPPRAGAYSSYNK 2
           L+P+   ++A PPP    Y    K
Sbjct: 106 LSPQIQTQVARPPPARSPYEWIKK 129


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = -1

Query: 73  LAPRANDRLAPPPPRAGAYSSYNK 2
           L+P+   ++A PPP    Y    K
Sbjct: 106 LSPQIQTQVARPPPARSPYEWIKK 129


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,128
Number of Sequences: 336
Number of extensions: 2716
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13516233
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)