Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_C07
(607 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L16842-1|AAA20046.1| 480|Homo sapiens ubiquinol-cytochrome c re... 30 5.5
D26485-1|BAA05495.1| 480|Homo sapiens core I protein protein. 30 5.5
BC009586-1|AAH09586.1| 480|Homo sapiens ubiquinol-cytochrome c ... 30 5.5
M29063-1|AAA36576.1| 303|Homo sapiens protein ( Human hnRNP C2 ... 30 7.3
BC007052-1|AAH07052.1| 306|Homo sapiens heterogeneous nuclear r... 30 7.3
AK223517-1|BAD97237.1| 256|Homo sapiens Heterogeneous nuclear r... 30 7.3
AB209527-1|BAD92764.1| 313|Homo sapiens Heterogeneous nuclear r... 30 7.3
AY310398-1|AAP75619.1| 2213|Homo sapiens sidekick-like protein 1... 29 9.6
AK074083-1|BAB84909.1| 1471|Homo sapiens FLJ00154 protein protein. 29 9.6
AK074077-1|BAB84903.1| 572|Homo sapiens FLJ00148 protein protein. 29 9.6
AK055987-1|BAB71066.1| 273|Homo sapiens protein ( Homo sapiens ... 29 9.6
>L16842-1|AAA20046.1| 480|Homo sapiens ubiquinol-cytochrome c
reductase core I protein protein.
Length = 480
Score = 30.3 bits (65), Expect = 5.5
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +3
Query: 231 PWLSAQASVTSRNPRRFASPDVRHRD 308
PW A+ +V + P RF ++RHRD
Sbjct: 254 PWTYAEDAVPTLTPCRFTGSEIRHRD 279
>D26485-1|BAA05495.1| 480|Homo sapiens core I protein protein.
Length = 480
Score = 30.3 bits (65), Expect = 5.5
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +3
Query: 231 PWLSAQASVTSRNPRRFASPDVRHRD 308
PW A+ +V + P RF ++RHRD
Sbjct: 254 PWTYAEDAVPTLTPCRFTGSEIRHRD 279
>BC009586-1|AAH09586.1| 480|Homo sapiens ubiquinol-cytochrome c
reductase core protein I protein.
Length = 480
Score = 30.3 bits (65), Expect = 5.5
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +3
Query: 231 PWLSAQASVTSRNPRRFASPDVRHRD 308
PW A+ +V + P RF ++RHRD
Sbjct: 254 PWTYAEDAVPTLTPCRFTGSEIRHRD 279
>M29063-1|AAA36576.1| 303|Homo sapiens protein ( Human hnRNP C2
protein mRNA. ).
Length = 303
Score = 29.9 bits (64), Expect = 7.3
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +1
Query: 76 KLDTGKNNIVRSSLEMHGVIEQRPWTKNILEKGFD 180
K++ GK + RS+ EM+G + + P +L FD
Sbjct: 89 KVNRGKAGVKRSAAEMYGSVTEHPSPSPLLSSSFD 123
>BC007052-1|AAH07052.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein C (C1/C2) protein.
Length = 306
Score = 29.9 bits (64), Expect = 7.3
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +1
Query: 76 KLDTGKNNIVRSSLEMHGVIEQRPWTKNILEKGFD 180
K++ GK + RS+ EM+G + + P +L FD
Sbjct: 89 KVNRGKAGVKRSAAEMYGSVTEHPSPSPLLSSSFD 123
>AK223517-1|BAD97237.1| 256|Homo sapiens Heterogeneous nuclear
ribonucleoproteins C1/C2 (hnRNP C1 / hnRNP C2) variant
protein.
Length = 256
Score = 29.9 bits (64), Expect = 7.3
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +1
Query: 76 KLDTGKNNIVRSSLEMHGVIEQRPWTKNILEKGFD 180
K++ GK + RS+ EM+G + + P +L FD
Sbjct: 39 KVNRGKAGVKRSAAEMYGSVTEHPSPSPLLSSSFD 73
>AB209527-1|BAD92764.1| 313|Homo sapiens Heterogeneous nuclear
ribonucleoproteins C1/C2 variant protein.
Length = 313
Score = 29.9 bits (64), Expect = 7.3
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +1
Query: 76 KLDTGKNNIVRSSLEMHGVIEQRPWTKNILEKGFD 180
K++ GK + RS+ EM+G + + P +L FD
Sbjct: 96 KVNRGKAGVKRSAAEMYGSVTEHPSPSPLLSSSFD 130
>AY310398-1|AAP75619.1| 2213|Homo sapiens sidekick-like protein 1
protein.
Length = 2213
Score = 29.5 bits (63), Expect = 9.6
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +3
Query: 432 LYAYFLHKQHEVYRRASIQKGLSTMSNTIKI 524
++A LH Q++ Y+ S KG+STM ++ +
Sbjct: 2026 VFALVLHGQNKKYKNCSTGKGISTMEESVTL 2056
>AK074083-1|BAB84909.1| 1471|Homo sapiens FLJ00154 protein protein.
Length = 1471
Score = 29.5 bits (63), Expect = 9.6
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +3
Query: 432 LYAYFLHKQHEVYRRASIQKGLSTMSNTIKI 524
++A LH Q++ Y+ S KG+STM ++ +
Sbjct: 1284 VFALVLHGQNKKYKNCSTGKGISTMEESVTL 1314
>AK074077-1|BAB84903.1| 572|Homo sapiens FLJ00148 protein protein.
Length = 572
Score = 29.5 bits (63), Expect = 9.6
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +3
Query: 432 LYAYFLHKQHEVYRRASIQKGLSTMSNTIKI 524
++A LH Q++ Y+ S KG+STM ++ +
Sbjct: 385 VFALVLHGQNKKYKNCSTGKGISTMEESVTL 415
>AK055987-1|BAB71066.1| 273|Homo sapiens protein ( Homo sapiens
cDNA FLJ31425 fis, clone NT2NE2000455, weakly similar to
Sdk (sidekick) protein. ).
Length = 273
Score = 29.5 bits (63), Expect = 9.6
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +3
Query: 432 LYAYFLHKQHEVYRRASIQKGLSTMSNTIKI 524
++A LH Q++ Y+ S KG+STM ++ +
Sbjct: 86 VFALVLHGQNKKYKNCSTGKGISTMEESVTL 116
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,472,423
Number of Sequences: 237096
Number of extensions: 1755965
Number of successful extensions: 3952
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3837
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3952
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6410414940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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