Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_C06
(564 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0997 + 7884974-7885043,7885689-7885975,7886056-7886311,788... 44 8e-05
11_06_0689 - 26294961-26294976,26295271-26295414,26295506-262959... 41 8e-04
05_06_0116 - 25719030-25719458,25720138-25720301,25720390-257206... 40 0.001
03_02_0712 - 10600147-10600196,10600257-10600378,10600993-106014... 37 0.013
01_05_0108 + 18183250-18183336,18183451-18183962,18184074-181842... 35 0.039
02_04_0414 - 22685981-22686178,22686374-22686465,22686580-226866... 31 0.48
02_05_0540 + 29852109-29852195,29852304-29852477,29852585-298528... 31 0.63
03_01_0400 - 3102325-3102519,3103009-3103455,3105063-3105500 30 1.1
02_05_0112 - 25931775-25932078,25932554-25932732,25934033-25935184 30 1.1
03_06_0648 + 35280492-35280645,35281742-35281820,35282491-352825... 30 1.5
07_03_0603 - 19890664-19890823,19891104-19891329,19891498-198916... 29 3.4
09_02_0371 + 8064616-8065683,8066194-8068318,8068425-8068468 28 4.5
04_03_0379 + 15141127-15141231,15141566-15141769,15141856-151420... 28 4.5
04_03_0349 - 14738360-14738385,14738762-14738807,14738887-147391... 28 4.5
>01_01_0997 +
7884974-7885043,7885689-7885975,7886056-7886311,
7886455-7886537,7886634-7886687,7887941-7888012,
7889093-7889155,7889274-7889324,7889432-7889513,
7889606-7889701,7889774-7889944,7890024-7890130,
7890229-7890326,7890798-7891048,7891235-7891398,
7891689-7891979,7892067-7892377,7892477-7892655,
7893231-7893301
Length = 918
Score = 44.0 bits (99), Expect = 8e-05
Identities = 33/101 (32%), Positives = 52/101 (51%), Gaps = 9/101 (8%)
Frame = +2
Query: 20 ESLEWIRVITGEPENISG--DMDNFYEVLKDGTLLCKLVNTIQPNMVKKV--NVS----- 172
++ W+ + G P +S F +++G +LCK +N IQP V KV N S
Sbjct: 29 QAATWLESVIG-PFGLSRCPSEQEFVAAVRNGIVLCKAINKIQPGAVPKVVANASCDSQP 87
Query: 173 KMAFKCMENINAFLEAARQLGVPAQETFQTVDLWERQNLNS 295
AF+ ENI FL A ++L +P F+ DL E+ N+++
Sbjct: 88 STAFQYFENIRNFLVAVQELKLPC---FEASDL-EKDNIDA 124
>11_06_0689 -
26294961-26294976,26295271-26295414,26295506-26295909,
26296112-26296261,26296334-26296497,26296526-26296836,
26296948-26297084,26297276-26297416,26297821-26297867,
26297977-26298072,26298168-26298249,26298332-26298472,
26298607-26298702,26298809-26298877,26298959-26299030,
26299201-26299368,26299577-26299711,26299792-26299958,
26301213-26301369
Length = 898
Score = 40.7 bits (91), Expect = 8e-04
Identities = 33/113 (29%), Positives = 52/113 (46%), Gaps = 13/113 (11%)
Frame = +2
Query: 20 ESLEWIR----VITGEPENISGDMDNFYEVLKDGTLLCKLVNTIQPNMVKKV-------- 163
E+ W+R V+ G+ + F L++G +LC +N +QP V KV
Sbjct: 58 EAANWLRRVVGVVCGKDLAEEPSEEEFRLGLRNGIVLCNALNKVQPGSVPKVVEAPSDSA 117
Query: 164 -NVSKMAFKCMENINAFLEAARQLGVPAQETFQTVDLWERQNLNSVVICLQSL 319
+ A++ EN+ FL + LG+P TF+ DL + VV C+ SL
Sbjct: 118 DGAALCAYQYFENVRNFLMGLQDLGLP---TFEASDLEKGGKGVRVVDCVLSL 167
>05_06_0116 -
25719030-25719458,25720138-25720301,25720390-25720643,
25720727-25720782,25721032-25721169,25721315-25721421,
25721502-25721681,25721757-25721852,25721926-25722007,
25722084-25722425,25722666-25722695,25722788-25722880,
25722963-25723040,25723122-25723222,25723833-25724058,
25724647-25724760,25724855-25725009,25725515-25725554
Length = 894
Score = 39.9 bits (89), Expect = 0.001
Identities = 27/99 (27%), Positives = 48/99 (48%), Gaps = 2/99 (2%)
Frame = +2
Query: 20 ESLEWIRVITGEP-ENISGDMDNFYEVLKDGTLLCKLVNTIQPNMVKKV-NVSKMAFKCM 193
E +EW+ + E + D E+L DGT+LC +VN + P ++++ + +
Sbjct: 19 EVIEWLNALLPEYCLPLDSSDDELRELLSDGTVLCHIVNALIPGVLEESWGAYASSDQHA 78
Query: 194 ENINAFLEAARQLGVPAQETFQTVDLWERQNLNSVVICL 310
++ FL +G+P F DL E +++ VV CL
Sbjct: 79 GHVKKFLAVVADMGLPG---FSVKDL-EEGSMSGVVDCL 113
>03_02_0712 -
10600147-10600196,10600257-10600378,10600993-10601489,
10601663-10601851,10601936-10602099,10602193-10602446,
10602535-10602691,10602830-10602995,10603121-10603227,
10603305-10603478,10603594-10603689,10603781-10603862,
10603948-10604058,10604253-10604309,10604638-10604709,
10604799-10605041,10605195-10605341,10605381-10605616,
10605745-10605865
Length = 1014
Score = 36.7 bits (81), Expect = 0.013
Identities = 21/75 (28%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Frame = +2
Query: 125 LVNTIQPNMVKKVNVSKMAFKCMENINAFLEAARQLGVPAQETFQTVDLWERQNLNSVVI 304
+VNT ++++ + AF+ EN+ FL AA+++G+P E + + + V+
Sbjct: 121 VVNTAADSVLQPDGAALSAFQYFENVRNFLVAAQEIGLPCFEASDLEQGGKSARVVNCVL 180
Query: 305 CLQSLG--RKAGGFG 343
L+S G ++ GG G
Sbjct: 181 ALKSYGDWKQCGGTG 195
>01_05_0108 +
18183250-18183336,18183451-18183962,18184074-18184245,
18184984-18185022,18185117-18185185,18185281-18185397,
18185842-18186056,18187085-18187240,18187328-18187527,
18187927-18188084,18188321-18188417,18188738-18188829,
18189018-18189191
Length = 695
Score = 35.1 bits (77), Expect = 0.039
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Frame = +2
Query: 80 DNFYEVLKDGTLLCKLVNTIQPNMV--KKVNVSKM--AFKCMENINAFLEAARQLG 235
D+ + + KDG LLCKL+N P + + +N K+ ++ EN L +A+ +G
Sbjct: 187 DHLFHLTKDGVLLCKLINLAVPGTIDERAINTKKLLNLWEKNENHTLCLNSAKAIG 242
>02_04_0414 -
22685981-22686178,22686374-22686465,22686580-22686676,
22686801-22686916,22687314-22687513,22687588-22687740,
22687960-22688171,22688403-22688519,22688613-22688687,
22688815-22688853,22689518-22689689,22689809-22690056,
22690151-22690324,22690418-22690504
Length = 659
Score = 31.5 bits (68), Expect = 0.48
Identities = 16/56 (28%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Frame = +2
Query: 80 DNFYEVLKDGTLLCKLVNTIQPNMV--KKVNVSK--MAFKCMENINAFLEAARQLG 235
++ + +++DG LLCKL+N P + + +N K ++ EN L +A+ +G
Sbjct: 157 NDIFNLVRDGVLLCKLINVAVPGTIDERAINTKKDPNPWERNENHTLCLNSAKAIG 212
>02_05_0540 +
29852109-29852195,29852304-29852477,29852585-29852841,
29852954-29853125,29853513-29853551,29853647-29853715,
29853795-29853911,29854190-29854401,29854578-29854736,
29854810-29855009,29855100-29855266,29855346-29855442,
29855560-29855651,29855861-29856139
Length = 706
Score = 31.1 bits (67), Expect = 0.63
Identities = 15/56 (26%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Frame = +2
Query: 80 DNFYEVLKDGTLLCKLVNTIQPNMVKKVNVSKM----AFKCMENINAFLEAARQLG 235
+ +++++DG LLCKL+N P + + ++K ++ EN L +A+ +G
Sbjct: 160 NQLFDLVRDGVLLCKLINLAVPGTIDERAINKKRVLNPWERNENHTLCLNSAKAIG 215
>03_01_0400 - 3102325-3102519,3103009-3103455,3105063-3105500
Length = 359
Score = 30.3 bits (65), Expect = 1.1
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +2
Query: 311 QSLGRKAGGFGK-PSIGPKEAEKNVRNFSEEQLRAGQGVIS 430
+S GRK F P+ G AE +VRN S QLR G+++
Sbjct: 37 ESFGRKGLRFAADPATGAPTAELSVRNGSSLQLRLADGLVT 77
>02_05_0112 - 25931775-25932078,25932554-25932732,25934033-25935184
Length = 544
Score = 30.3 bits (65), Expect = 1.1
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +2
Query: 317 LGRKAGGFGKPSIGPKEAEKNVRNFSEEQLRAGQGVISLQY 439
+G + G F P +EA + R F+ + + G+ V+S+QY
Sbjct: 173 MGFRVGSFAAPFTRAEEAAMSTRRFAPVETQLGRLVVSVQY 213
>03_06_0648 +
35280492-35280645,35281742-35281820,35282491-35282593,
35282695-35282815,35283144-35283232,35283324-35283473,
35285842-35287161
Length = 671
Score = 29.9 bits (64), Expect = 1.5
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = +2
Query: 317 LGRKAGGFGKPSIGPKEAEKNVRNFSEEQLRAGQGVISLQYGSNKGATQSGINFGNTRTH 496
+GR + P +GP+ AE++ S+ + + G L YG SG++ GN +
Sbjct: 290 IGRSSPSVPNPPLGPRGAERSSNLSSQTPVISSSG---LSYG-------SGMHVGNANSR 339
Query: 497 V-GNTLLPT 520
V GN++ PT
Sbjct: 340 VNGNSVQPT 348
>07_03_0603 -
19890664-19890823,19891104-19891329,19891498-19891636,
19891849-19891942,19892291-19892311,19892506-19892941,
19893133-19893280,19893369-19893476,19893543-19893659,
19893960-19894016,19894488-19894553,19895140-19895328,
19895410-19895523,19895684-19895766,19895857-19896322,
19896832-19897476
Length = 1022
Score = 28.7 bits (61), Expect = 3.4
Identities = 14/59 (23%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Frame = +2
Query: 83 NFYEVLKDGTLLCKLVNTIQPN---MVKKVNVSKMAFKCMENINAFLEAARQLGVPAQE 250
N +E L+DG +LC+++ + + ++K + S K + N ++ +Q G P +
Sbjct: 410 NLFEDLQDGIILCRIIQLLTSDASIILKVIAPSDTYKKRLHNCTMAIQYIKQAGFPLSD 468
>09_02_0371 + 8064616-8065683,8066194-8068318,8068425-8068468
Length = 1078
Score = 28.3 bits (60), Expect = 4.5
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = -3
Query: 238 HAELPRCLEECVNVFHAFERHLGYVHFLHHVRLNGVHQLAQ 116
H + R LE A +++G + FL H+ L G H LA+
Sbjct: 599 HLKHLRYLELGYTNISALPQNIGKMKFLEHIGLRGCHSLAE 639
>04_03_0379 +
15141127-15141231,15141566-15141769,15141856-15142037,
15142898-15143036,15143111-15143299,15143943-15144050,
15144143-15144222,15144549-15144600,15144731-15144799,
15144876-15144910,15145351-15145510,15147414-15147470,
15147566-15147622,15147971-15148027,15148126-15148182,
15148551-15148670,15148760-15148996,15149550-15149591
Length = 649
Score = 28.3 bits (60), Expect = 4.5
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +1
Query: 469 HQFRQHENTCREHIIAYIKPVCKLCI 546
H FR NT +EH+I+Y++ + K I
Sbjct: 158 HFFRTVSNTHQEHVISYMETIMKFVI 183
>04_03_0349 -
14738360-14738385,14738762-14738807,14738887-14739123,
14739213-14739332,14739702-14739758,14740262-14740318,
14740412-14740468,14742372-14742531,14742972-14743006,
14743083-14743151,14743282-14743333,14743660-14743739,
14743832-14743939,14744583-14744771,14744846-14744984,
14745845-14746026,14746113-14746316,14746651-14746755
Length = 640
Score = 28.3 bits (60), Expect = 4.5
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +1
Query: 469 HQFRQHENTCREHIIAYIKPVCKLCI 546
H FR NT +EH+I+Y++ + K I
Sbjct: 158 HFFRTVSNTHQEHVISYMETIMKFVI 183
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,737,860
Number of Sequences: 37544
Number of extensions: 361460
Number of successful extensions: 1009
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 983
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1008
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1293275844
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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