Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_C06
         (564 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    23   2.1  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    23   2.1  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    23   2.1  
DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    23   2.8  
DQ325109-1|ABD14123.1|  177|Apis mellifera complementary sex det...    22   4.9  
DQ325108-1|ABD14122.1|  177|Apis mellifera complementary sex det...    22   4.9  
DQ325107-1|ABD14121.1|  176|Apis mellifera complementary sex det...    22   4.9  
DQ325106-1|ABD14120.1|  177|Apis mellifera complementary sex det...    22   4.9  
AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex det...    22   4.9  

>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 16/68 (23%), Positives = 31/68 (45%)
 Frame = -1

Query: 525 FYVGNNVFPTCVLVLPKLMPLCVAPLFEPYCREMTP*PALSCSSEKFLTFFSASLGPIDG 346
           +Y+ +   PTC++V+   +   + P   P    +     L+ S++   +   ASL P+  
Sbjct: 246 YYLFHTYIPTCLIVIMSWVSFWIKPEAAPARVTLGVTSLLTLSTQHAKS--QASLPPVSY 303

Query: 345 LPKPPAFL 322
           L    AF+
Sbjct: 304 LKAVDAFM 311


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 9/25 (36%), Positives = 17/25 (68%)
 Frame = +2

Query: 32  WIRVITGEPENISGDMDNFYEVLKD 106
           WIR+  G+  +IS  +D  YE++++
Sbjct: 61  WIRLTYGQTNHISLTLDLEYELVEN 85


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 9/25 (36%), Positives = 17/25 (68%)
 Frame = +2

Query: 32  WIRVITGEPENISGDMDNFYEVLKD 106
           WIR+  G+  +IS  +D  YE++++
Sbjct: 99  WIRLTYGQTNHISLTLDLEYELVEN 123


>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 12/25 (48%), Positives = 14/25 (56%), Gaps = 2/25 (8%)
 Frame = +3

Query: 165 TYPRWRSNAWKTLTHSS--RQRGNS 233
           T PRWR+    TLT+ S    RG S
Sbjct: 82  TVPRWRNGIPATLTYISLDTNRGGS 106


>DQ325109-1|ABD14123.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 7/12 (58%), Positives = 11/12 (91%)
 Frame = +3

Query: 528 SVQTLYNNNNNF 563
           S +T++NNNNN+
Sbjct: 86  SNKTIHNNNNNY 97


>DQ325108-1|ABD14122.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 7/12 (58%), Positives = 11/12 (91%)
 Frame = +3

Query: 528 SVQTLYNNNNNF 563
           S +T++NNNNN+
Sbjct: 86  SNKTIHNNNNNY 97


>DQ325107-1|ABD14121.1|  176|Apis mellifera complementary sex
           determiner protein.
          Length = 176

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 7/12 (58%), Positives = 11/12 (91%)
 Frame = +3

Query: 528 SVQTLYNNNNNF 563
           S +T++NNNNN+
Sbjct: 86  SNKTIHNNNNNY 97


>DQ325106-1|ABD14120.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 7/12 (58%), Positives = 11/12 (91%)
 Frame = +3

Query: 528 SVQTLYNNNNNF 563
           S +T++NNNNN+
Sbjct: 86  SNKTIHNNNNNY 97


>AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex
           determiner protein.
          Length = 410

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 7/12 (58%), Positives = 11/12 (91%)
 Frame = +3

Query: 528 SVQTLYNNNNNF 563
           S +T++NNNNN+
Sbjct: 319 SNKTIHNNNNNY 330


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,841
Number of Sequences: 438
Number of extensions: 4152
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16317903
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)