Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_C06
(564 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g47500.1 68415.m05929 kinesin motor protein-related 45 4e-05
At5g27000.1 68418.m03221 kinesin motor protein-related non-conse... 41 7e-04
At1g09170.1 68414.m01024 kinesin motor protein-related similar t... 39 0.002
At5g55400.1 68418.m06902 fimbrin-like protein, putative similar ... 38 0.006
At5g35700.1 68418.m04269 fimbrin-like protein, putative similar ... 37 0.008
At5g48460.1 68418.m05992 fimbrin-like protein, putative strong s... 37 0.011
At4g26700.1 68417.m03848 fimbrin-like protein (FIM1) identical t... 36 0.025
At2g04750.1 68415.m00485 fimbrin-like protein, putative similar ... 35 0.033
At3g44730.1 68416.m04814 kinesin motor protein-related similar t... 34 0.075
At1g55970.1 68414.m06419 histone acetyltransferase 4 (HAC4) simi... 32 0.30
At3g16760.2 68416.m02140 tetratricopeptide repeat (TPR)-containi... 30 0.93
At3g16760.1 68416.m02139 tetratricopeptide repeat (TPR)-containi... 30 0.93
At5g41310.1 68418.m05020 kinesin motor protein-related 30 1.2
At1g63640.2 68414.m07198 kinesin motor protein-related C-termina... 29 1.6
At1g63640.1 68414.m07197 kinesin motor protein-related C-termina... 29 1.6
At5g21930.1 68418.m02545 ATPase E1-E2 type family protein / halo... 29 2.8
At1g80070.1 68414.m09373 splicing factor, putative strong simila... 28 3.7
At3g10070.1 68416.m01207 transcription initiation factor IID (TF... 28 5.0
At2g05420.1 68415.m00570 meprin and TRAF homology domain-contain... 27 6.5
At3g57950.1 68416.m06459 expressed protein hypothetical protein ... 27 8.7
At3g48290.1 68416.m05270 cytochrome P450, putative very strong s... 27 8.7
>At2g47500.1 68415.m05929 kinesin motor protein-related
Length = 974
Score = 44.8 bits (101), Expect = 4e-05
Identities = 32/99 (32%), Positives = 51/99 (51%), Gaps = 17/99 (17%)
Frame = +2
Query: 98 LKDGTLLCKLVNTIQPNMVKKVNVSK------------MAFKCMENINAFLEAARQLGVP 241
L+ G +LCK++N +QP V KV S AF+ EN+ FL A +++G P
Sbjct: 79 LRSGIILCKVLNKVQPGAVSKVVESPCDAILVADGAPLSAFQYFENVRNFLVAIQEMGFP 138
Query: 242 AQETFQTVDLWERQNLNSVVICLQSL-----GRKAGGFG 343
TF+ DL + N + VV C+ ++ +++GG G
Sbjct: 139 ---TFEASDLEQGGNASRVVNCVLAIKSYDEWKQSGGIG 174
>At5g27000.1 68418.m03221 kinesin motor protein-related
non-consensus AT donor splice site at exon 12;
non-consensus AC acceptor splice site at exon 13
Length = 987
Score = 40.7 bits (91), Expect = 7e-04
Identities = 37/143 (25%), Positives = 65/143 (45%), Gaps = 14/143 (9%)
Frame = +2
Query: 20 ESLEWIRVITG--EPENISGDM--DNFYEVLKDGTLLCKLVNTIQPNMVKKV-------- 163
E+ W+R + G ++ G+ + F L+ G +LC ++N + P V KV
Sbjct: 49 EAAGWLRDMIGVSNGKDFPGEPSEEEFRLGLRSGIVLCNVLNKVNPGSVSKVVEAPDDVA 108
Query: 164 -NVSKMAFKCMENINAFLEAARQLGVPAQETFQTVDLWERQNLNSVVICLQSLGRKAGGF 340
+ AF+ ENI FL A ++G+P +F+ D+ + +V C+ +L +
Sbjct: 109 DGAALSAFQYFENIRNFLVAIEEMGLP---SFEASDMEKGGKSIRIVNCILALKSYSEWK 165
Query: 341 GKPSIGPKEAEKNVR-NFSEEQL 406
K GP N++ NF +L
Sbjct: 166 LKGENGPWRYGSNMKHNFGSRKL 188
>At1g09170.1 68414.m01024 kinesin motor protein-related similar to
GB:AAB61066
Length = 1010
Score = 39.1 bits (87), Expect = 0.002
Identities = 30/116 (25%), Positives = 51/116 (43%), Gaps = 16/116 (13%)
Frame = +2
Query: 20 ESLEWIR----VITGEPENISGDMDNFYEVLKDGTLLCKLVNTIQPNMVKKV-------- 163
E+ W+R V+ G ++F L+ G LLC ++N ++P V KV
Sbjct: 59 EAARWVRNTLGVVGGRDLPADPSEEDFRIALRSGILLCNVLNRVKPGAVPKVVEAPNDPL 118
Query: 164 ----NVSKMAFKCMENINAFLEAARQLGVPAQETFQTVDLWERQNLNSVVICLQSL 319
+ AF+ EN+ FL ++G+P TF+ D + +V C+ +L
Sbjct: 119 VNQDGAALSAFQYFENLRNFLVFVEEMGIP---TFEVSDFEKGGKSARIVECVLAL 171
>At5g55400.1 68418.m06902 fimbrin-like protein, putative similar to
fimbrin-like protein (ATFIM1) [Arabidopsis thaliana]
GI:2905893; contains Pfam profile PF00307: Calponin
homology (CH) domain
Length = 714
Score = 37.5 bits (83), Expect = 0.006
Identities = 19/58 (32%), Positives = 34/58 (58%), Gaps = 4/58 (6%)
Frame = +2
Query: 74 DMDNFYEVLKDGTLLCKLVNTIQPNMV--KKVNVSKM--AFKCMENINAFLEAARQLG 235
D ++ YE++KDG LLCKL+N P + + +N ++ ++ EN L +A+ +G
Sbjct: 153 DSNDLYELVKDGVLLCKLINIAVPGTIDERAINTKRVLNPWERNENHTLCLNSAKAVG 210
>At5g35700.1 68418.m04269 fimbrin-like protein, putative similar to
fimbrin-like protein (ATFIM1) [Arabidopsis thaliana]
GI:2905893, fimbrin [Schizosaccharomyces pombe]
GI:3057144; contains Pfam profile PF00307: Calponin
homology (CH) domain
Length = 687
Score = 37.1 bits (82), Expect = 0.008
Identities = 18/54 (33%), Positives = 32/54 (59%), Gaps = 4/54 (7%)
Frame = +2
Query: 86 FYEVLKDGTLLCKLVNTIQPNMV--KKVNVSKM--AFKCMENINAFLEAARQLG 235
F++++KDG LLCKL+N P + + +N K ++ EN+ L +A+ +G
Sbjct: 155 FFDLVKDGVLLCKLINVAVPGTIDERAINTKKTLNPWERNENLTLGLNSAKAIG 208
>At5g48460.1 68418.m05992 fimbrin-like protein, putative strong
similarity to fimbrin-like protein AtFim2 [Arabidopsis
thaliana] GI:2737926; contains Pfam profile PF00307:
Calponin homology (CH) domain
Length = 654
Score = 36.7 bits (81), Expect = 0.011
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 4/61 (6%)
Frame = +2
Query: 65 ISGDMDNFYEVLKDGTLLCKLVNTIQPNMV--KKVNVSKM--AFKCMENINAFLEAARQL 232
I+ ++ +EV KDG LLCKL+N P + + +N M ++ EN L +A+ +
Sbjct: 150 INPSSNDLFEVAKDGVLLCKLINVAVPGTIDERAINTKSMLNPWERNENHTLCLNSAKAI 209
Query: 233 G 235
G
Sbjct: 210 G 210
>At4g26700.1 68417.m03848 fimbrin-like protein (FIM1) identical to
fimbrin-like protein (ATFIM1) [Arabidopsis thaliana]
GI:2905893
Length = 687
Score = 35.5 bits (78), Expect = 0.025
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 4/56 (7%)
Frame = +2
Query: 80 DNFYEVLKDGTLLCKLVNTIQPNMV--KKVNVSKM--AFKCMENINAFLEAARQLG 235
+ YE++KDG LLCKL+N P + + +N ++ ++ EN L +A+ +G
Sbjct: 154 NQLYELVKDGVLLCKLINVAVPGTIDERAINTKRVLNPWERNENHTLCLNSAKAVG 209
>At2g04750.1 68415.m00485 fimbrin-like protein, putative similar to
fimbrin-like protein (ATFIM1) [Arabidopsis thaliana]
GI:2905893; contains Pfam profile PF00307: Calponin
homology (CH) domain
Length = 652
Score = 35.1 bits (77), Expect = 0.033
Identities = 17/53 (32%), Positives = 32/53 (60%), Gaps = 4/53 (7%)
Frame = +2
Query: 89 YEVLKDGTLLCKLVNTIQPNMV--KKVNVSK--MAFKCMENINAFLEAARQLG 235
++++KDG LLCKL+N P + + +N K ++ EN++ L +A+ +G
Sbjct: 150 FDLVKDGVLLCKLINIAVPGTIDERAINTKKELNPWERTENLSLCLNSAKAIG 202
>At3g44730.1 68416.m04814 kinesin motor protein-related similar to 4
other kinesin-like proteins of A. thaliana: F02P16.12
(PID:g2191180), katA (D11371), katB (D21137), and katC
(D21138); contains non-consensus AT-AC splice sites at
intron 10
Length = 1087
Score = 33.9 bits (74), Expect = 0.075
Identities = 30/106 (28%), Positives = 48/106 (45%), Gaps = 18/106 (16%)
Frame = +2
Query: 80 DNFYEVLKDGTLLCKLVNTIQPNMVKKV-------------NVSKMAFKCMENINAFLEA 220
D F L++G +LC ++N + P V KV ++ A + EN+ FL+A
Sbjct: 16 DEFSLALRNGLILCNVLNKVNPGSVLKVVENPITPAIQYADGAAQSAIQYFENMRNFLKA 75
Query: 221 ARQLGVPAQETFQTVDLWERQNLNSVVICLQSL-----GRKAGGFG 343
+ + TF DL + + N VV C+ L ++AGG G
Sbjct: 76 VEDMQL---LTFGASDLEKGGSSNKVVDCILCLKGFYEWKQAGGVG 118
>At1g55970.1 68414.m06419 histone acetyltransferase 4 (HAC4) similar
to CREB-binding protein GB:AAC51770 GI:2443859 from [Homo
sapiens]; contains Pfam PF02135: TAZ zinc finger profile;
contains Pfam PF00569: Zinc finger, ZZ type domain;
identical to histone acetyltransferase HAC4 (GI:14794966)
{Arabidopsis thaliana}
Length = 1456
Score = 31.9 bits (69), Expect = 0.30
Identities = 24/83 (28%), Positives = 37/83 (44%)
Frame = +2
Query: 161 VNVSKMAFKCMENINAFLEAARQLGVPAQETFQTVDLWERQNLNSVVICLQSLGRKAGGF 340
V V K +E FLE R+ P++ +++ ++ Q + +V +CL G F
Sbjct: 905 VRVVASVDKVLEVKERFLELFREENYPSEFPYKSKAIFLFQKIENVEVCL--FGMFVQEF 962
Query: 341 GKPSIGPKEAEKNVRNFSEEQLR 409
G S GP + R S E LR
Sbjct: 963 GTDS-GPPNERRTFRTVSGEALR 984
>At3g16760.2 68416.m02140 tetratricopeptide repeat (TPR)-containing
protein low similarity to TPR-containing protein
involved in spermatogenesis TPIS [Mus musculus]
GI:6272682; contains Pfam profile PF00515:
tetratricopeptide repeat (TPR) domain
Length = 456
Score = 30.3 bits (65), Expect = 0.93
Identities = 19/58 (32%), Positives = 25/58 (43%)
Frame = +2
Query: 335 GFGKPSIGPKEAEKNVRNFSEEQLRAGQGVISLQYGSNKGATQSGINFGNTRTHVGNT 508
GFG S G K + N N + QGV +L G + G T +FG + NT
Sbjct: 219 GFGSKSSGSKPGKVN-NNAQNDTFGNFQGVSNLNSGGSTGTTTQINDFGGFQASKSNT 275
>At3g16760.1 68416.m02139 tetratricopeptide repeat (TPR)-containing
protein low similarity to TPR-containing protein
involved in spermatogenesis TPIS [Mus musculus]
GI:6272682; contains Pfam profile PF00515:
tetratricopeptide repeat (TPR) domain
Length = 475
Score = 30.3 bits (65), Expect = 0.93
Identities = 19/58 (32%), Positives = 25/58 (43%)
Frame = +2
Query: 335 GFGKPSIGPKEAEKNVRNFSEEQLRAGQGVISLQYGSNKGATQSGINFGNTRTHVGNT 508
GFG S G K + N N + QGV +L G + G T +FG + NT
Sbjct: 219 GFGSKSSGSKPGKVN-NNAQNDTFGNFQGVSNLNSGGSTGTTTQINDFGGFQASKSNT 275
>At5g41310.1 68418.m05020 kinesin motor protein-related
Length = 961
Score = 29.9 bits (64), Expect = 1.2
Identities = 17/56 (30%), Positives = 30/56 (53%)
Frame = +2
Query: 98 LKDGTLLCKLVNTIQPNMVKKVNVSKMAFKCMENINAFLEAARQLGVPAQETFQTV 265
L DGT+LC L+N + P ++ + C+ NI FL A ++ +P E+ + +
Sbjct: 72 LVDGTVLCNLLNQLSPGSMRMGGSFEPG--CV-NIERFLAAMDEMTLPRFESLKAL 124
>At1g63640.2 68414.m07198 kinesin motor protein-related C-terminal
region is similar to C-term region of kinesin motor
protein GB:AAB51397 (Mus musculus); contains Pfam
profile: PF00225 Kinesin motor domain
Length = 1065
Score = 29.5 bits (63), Expect = 1.6
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +2
Query: 80 DNFYEVLKDGTLLCKLVNTIQPNMVKKVNVSKMAFKCMENINAFLEAARQLGVPAQE 250
D L+DGT+LC L+N + P ++ + A I FL A ++ +P E
Sbjct: 65 DELRACLRDGTVLCSLLNQLSPGSMRMGGSFEPA---SVKIERFLTAMDEMALPRFE 118
>At1g63640.1 68414.m07197 kinesin motor protein-related C-terminal
region is similar to C-term region of kinesin motor
protein GB:AAB51397 (Mus musculus); contains Pfam
profile: PF00225 Kinesin motor domain
Length = 1064
Score = 29.5 bits (63), Expect = 1.6
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +2
Query: 80 DNFYEVLKDGTLLCKLVNTIQPNMVKKVNVSKMAFKCMENINAFLEAARQLGVPAQE 250
D L+DGT+LC L+N + P ++ + A I FL A ++ +P E
Sbjct: 65 DELRACLRDGTVLCSLLNQLSPGSMRMGGSFEPA---SVKIERFLTAMDEMALPRFE 118
>At5g21930.1 68418.m02545 ATPase E1-E2 type family protein /
haloacid dehalogenase-like hydrolase family protein /
heavy-metal-associated domain-containing protein
contains InterPro accession IPR001757: ATPase, E1-E2
type; contains Pfam profiles PF00403:
Heavy-metal-associated domain, PF00702: haloacid
dehalogenase-like hydrolase
Length = 883
Score = 28.7 bits (61), Expect = 2.8
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = -1
Query: 537 FAHWFYVGNNVFPTCVL 487
FA W+YVG+++FP +L
Sbjct: 462 FAFWYYVGSHIFPDVLL 478
>At1g80070.1 68414.m09373 splicing factor, putative strong
similarity to splicing factor Prp8 [Homo sapiens]
GI:3661610; contains Pfam profile PF01398:
Mov34/MPN/PAD-1 family
Length = 2382
Score = 28.3 bits (60), Expect = 3.7
Identities = 23/68 (33%), Positives = 30/68 (44%)
Frame = +1
Query: 355 WTQRG*EEREKLLRGTTESRSRCHFPTIRFKQRRHTKRHQFRQHENTCREHIIAYIKPVC 534
WT RE++ RG T ++ C R R K Q RQH N ++ Y+ P
Sbjct: 796 WTNVAHYNRERIRRGATVDKTVCRKNLGRL-TRLWLKAEQERQH-NYLKDG--PYVTPEE 851
Query: 535 KLCIITTT 558
L I TTT
Sbjct: 852 ALAIYTTT 859
>At3g10070.1 68416.m01207 transcription initiation factor IID
(TFIID) subunit A family protein similar to hypothetical
protein GB:CAB10099 [Schizosaccharomyces pombe];
contains Pfam profile PF03847: Transcription initiation
factor TFIID subunit A
Length = 539
Score = 27.9 bits (59), Expect = 5.0
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = +2
Query: 314 SLGRKAGGFGKPSIGPKEAEKNVRNFSEEQLRAGQGV 424
S G++ GG G+ ++G EA N + ++ QG+
Sbjct: 166 SFGQQYGGLGRGTVGMSEATSNTSSPQVRMMQGTQGI 202
>At2g05420.1 68415.m00570 meprin and TRAF homology domain-containing
protein / MATH domain-containing protein similar to
ubiquitin-specific protease 12 [Arabidopsis thaliana]
GI:11993471; contains Pfam profile PF00917: MATH domain
Length = 297
Score = 27.5 bits (58), Expect = 6.5
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +3
Query: 42 LSPANPKTFPVIWTTSMKYSKT 107
L+ AN K+FP+ WT K+S T
Sbjct: 63 LNVANSKSFPIGWTRHTKFSLT 84
>At3g57950.1 68416.m06459 expressed protein hypothetical protein
T24P15.9 - Arabidopsis thaliana, PIR:T00927; expression
supported by MPSS
Length = 181
Score = 27.1 bits (57), Expect = 8.7
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = +1
Query: 427 FPTIRFKQRRHTKRHQFRQHENTCREHIIAYIKP 528
FPT K +R FR H N C H++ +P
Sbjct: 66 FPTKASKNQRKIFFGSFRLHYNWCSSHVVPVPQP 99
>At3g48290.1 68416.m05270 cytochrome P450, putative very strong
similarity to Cytochrome P450 71A24
(SP:Q9STK9)[Arabidopsis thaliana];
Length = 488
Score = 27.1 bits (57), Expect = 8.7
Identities = 12/28 (42%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = +2
Query: 26 LEWIRVITGEPENISGDMDNFYE-VLKD 106
++WIR + G+ IS D+D F E V++D
Sbjct: 223 IDWIRGLDGQLIKISNDLDEFLERVVQD 250
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,520,092
Number of Sequences: 28952
Number of extensions: 291154
Number of successful extensions: 826
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 799
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 825
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1082538160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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