Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_C04
(618 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC405.05 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 35 0.008
SPAC16A10.08c |mug74|SPAC589.01c|sequence orphan|Schizosaccharom... 34 0.019
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 32 0.076
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 32 0.076
SPAC18G6.02c |chp1||chromodomain protein Chp1|Schizosaccharomyce... 31 0.10
SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex sub... 31 0.13
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 31 0.18
SPAC17G6.05c |||Rhophilin-2 homolog|Schizosaccharomyces pombe|ch... 31 0.18
SPAC17A5.15c |||glutamate-tRNA ligase |Schizosaccharomyces pombe... 31 0.18
SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|ch... 30 0.23
SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1... 30 0.31
SPBC2A9.06c |||di-trans,poly-cis-decaprenylcistransferase|Schizo... 29 0.54
SPAC27F1.04c |nuf2||spindle pole body protein Nuf2|Schizosacchar... 28 0.94
SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces... 27 1.6
SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting pro... 27 1.6
SPAC9E9.12c |ybt1|abc1|ABC transporter Ybt1|Schizosaccharomyces ... 27 2.2
SPAC29A4.09 |||rRNA processing protein Rrp17|Schizosaccharomyces... 27 2.2
SPAC23C11.14 |zhf1|zhf, zhf|zinc ion transporter Zhf1|Schizosacc... 27 2.9
SPBC146.05c |cwf25||complexed with Cdc5 protein Cwf25 |Schizosac... 27 2.9
SPCC16A11.04 |snx12||sorting nexin Snx12 |Schizosaccharomyces po... 27 2.9
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 26 3.8
SPAC23C11.16 |plo1||Polo kinase Plo1|Schizosaccharomyces pombe|c... 26 3.8
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 26 5.0
SPBC4F6.14 |||RNA-binding protein|Schizosaccharomyces pombe|chr ... 26 5.0
SPBC405.02c ||SPBC4C3.01|sequence orphan|Schizosaccharomyces pom... 26 5.0
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 25 6.6
SPAPB1E7.07 |glt1||glutamate synthase Glt1 |Schizosaccharomyces ... 25 6.6
SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein Pkl1|S... 25 6.6
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 25 6.6
SPBC16D10.04c |dna2||DNA replication endonuclease-helicase Dna2|... 25 8.8
SPAC21E11.03c |pcr1|mts2|transcription factor Pcr1|Schizosacchar... 25 8.8
SPAC637.06 |||alpha-1,2-galactosyltransferase |Schizosaccharomyc... 25 8.8
SPAC57A7.06 |||U3 snoRNP protein Utp14 |Schizosaccharomyces pomb... 25 8.8
SPBC1709.15c |cft2||cleavage factor two Cft2/polyadenylation fac... 25 8.8
SPAC4F8.13c |rng2||IQGAP|Schizosaccharomyces pombe|chr 1|||Manual 25 8.8
>SPBC405.05 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 143
Score = 35.1 bits (77), Expect = 0.008
Identities = 22/63 (34%), Positives = 36/63 (57%)
Frame = +3
Query: 129 RQLKEVIIQCEEDQKNISLLQDSLEKTSQKVNIYKRQLTEQEGVSQQSVTRVRRFQRELE 308
RQLK C+ Q+N+ LQ ++ SQK + ++QL+ Q ++Q+ RV+ Q EL
Sbjct: 71 RQLKR---NCDLYQRNLQKLQLLFKQQSQKNTLLEKQLSLQTELNQEKDKRVKILQDELW 127
Query: 309 AAE 317
A +
Sbjct: 128 ALQ 130
>SPAC16A10.08c |mug74|SPAC589.01c|sequence
orphan|Schizosaccharomyces pombe|chr 1|||Manual
Length = 285
Score = 33.9 bits (74), Expect = 0.019
Identities = 22/68 (32%), Positives = 41/68 (60%), Gaps = 4/68 (5%)
Frame = +3
Query: 33 SKLEARMKDMELELDEEKRRHAETIKILRKKERQLKEVIIQCEEDQK----NISLLQDSL 200
SK +++++E L +EK+R+ E KI+R+ +++LKE+ Q +K +S QD L
Sbjct: 218 SKDSNQIQELENLLRKEKQRNTEHEKIIRRMKKELKELHSQFNFAKKLFISALSANQDIL 277
Query: 201 EKTSQKVN 224
+K + + N
Sbjct: 278 DKMNDEFN 285
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 31.9 bits (69), Expect = 0.076
Identities = 25/99 (25%), Positives = 55/99 (55%), Gaps = 3/99 (3%)
Frame = +3
Query: 21 KRIISKLEARMKDMELELDEEKRRHAETIKILRKKE--RQLKEVIIQCEEDQKNISLLQD 194
+++ + +A++ + E+E +E KR+ +K +R+KE R K+ + +E+++ +
Sbjct: 562 EKVAQQRQAKLLE-EIE-EENKRKQERELKKIREKEKKRDKKKQLKLAKEEERQRREAER 619
Query: 195 SLEKTSQKVNIYKRQLTEQEGVSQQSVTRVR-RFQRELE 308
E+ +QK KRQ ++ +Q + R + + Q+ELE
Sbjct: 620 LAEQAAQKALEAKRQEEARKKREEQRLKREQEKKQQELE 658
Score = 27.1 bits (57), Expect = 2.2
Identities = 31/121 (25%), Positives = 57/121 (47%), Gaps = 9/121 (7%)
Frame = +3
Query: 39 LEARMKDMELELDEEKRRHAETIKILRKKERQLKEVIIQCEEDQKNISLLQDSL--EKTS 212
LEA+ ++ + EE+R E K ++ ERQ +E + +E +K + Q EK +
Sbjct: 629 LEAKRQEEARKKREEQRLKREQEKKQQELERQKREEKQKQKEREKKLKKQQQEADREKMA 688
Query: 213 QKVNI----YKRQLTE---QEGVSQQSVTRVRRFQRELEAAEDRADTAESNLSLIRAKHR 371
++ + KR L E +E + ++ R RR E E+ E E+ ++ A ++
Sbjct: 689 REQRLREEEEKRILEERKRREKLDKEEEERRRRELLEKESEEKERRLREAKIAAFFAPNQ 748
Query: 372 T 374
T
Sbjct: 749 T 749
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 31.9 bits (69), Expect = 0.076
Identities = 18/79 (22%), Positives = 36/79 (45%)
Frame = +3
Query: 111 ILRKKERQLKEVIIQCEEDQKNISLLQDSLEKTSQKVNIYKRQLTEQEGVSQQSVTRVRR 290
I ++K+R + E+ + + + N+S L ++++ K+ + E Q +RR
Sbjct: 539 ITKEKDRLINELEQRIKSYEVNVSELNGTIDEYRNKLKDKEETYNEVMNAFQYKDNDLRR 598
Query: 291 FQRELEAAEDRADTAESNL 347
F + +DR SNL
Sbjct: 599 FHESINKLQDREKELTSNL 617
>SPAC18G6.02c |chp1||chromodomain protein Chp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 960
Score = 31.5 bits (68), Expect = 0.10
Identities = 19/77 (24%), Positives = 40/77 (51%)
Frame = +3
Query: 21 KRIISKLEARMKDMELELDEEKRRHAETIKILRKKERQLKEVIIQCEEDQKNISLLQDSL 200
KR L + + + EL + ++ E K +RKK + I EE++ + ++ +D+
Sbjct: 96 KREKEILRQQRQKRKSELTQLSQKVKEKFKKMRKKPARRIVTIANDEEEEDDQTMDEDAF 155
Query: 201 EKTSQKVNIYKRQLTEQ 251
E+ S + + +R LT++
Sbjct: 156 ERKSMQGELKERNLTDK 172
>SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex
subunit Rlf2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 544
Score = 31.1 bits (67), Expect = 0.13
Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Frame = +3
Query: 21 KRIISKLEARMKDMELE---LDEEKRRHAETIKILRKKERQLKEVIIQCEEDQKNISLLQ 191
KRI + K+ +L+ EE+ R E ++ R+KERQ +E + E +K +
Sbjct: 65 KRIYNGSAEAGKEKKLQKQRAQEERIRQKEAERLKREKERQQREQEKKLREQEKIAAKKM 124
Query: 192 DSLEK-TSQKVNIYKRQLTEQE 254
LEK +++ + ++Q ++E
Sbjct: 125 KELEKLEKERIRLQEQQRRKEE 146
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 30.7 bits (66), Expect = 0.18
Identities = 19/99 (19%), Positives = 51/99 (51%), Gaps = 1/99 (1%)
Frame = +3
Query: 54 KDMELELDEEKRRHAETIKILRKK-ERQLKEVIIQCEEDQKNISLLQDSLEKTSQKVNIY 230
K++ + +E + E + LR + ER++++ E++++ISL ++ +EK + ++
Sbjct: 552 KEVLSKSSKESDDYEEVVGKLRTEAEREIEKFEKTIRENEESISLFKEEVEKLTDEITQL 611
Query: 231 KRQLTEQEGVSQQSVTRVRRFQRELEAAEDRADTAESNL 347
+ ++ + R++ + E A++ + + SNL
Sbjct: 612 SERYNDKCHEFDELQKRLQTLEEENNKAKEDSTSKTSNL 650
Score = 29.5 bits (63), Expect = 0.41
Identities = 19/85 (22%), Positives = 37/85 (43%)
Frame = +3
Query: 84 KRRHAETIKILRKKERQLKEVIIQCEEDQKNISLLQDSLEKTSQKVNIYKRQLTEQEGVS 263
+R + +K+L+ E++LKE + + KNI L S+ VN LT ++
Sbjct: 883 ERSQSRELKLLQASEKRLKEQVEERNSLIKNIVTRFTQLNTGSKPVNTNVEALTTISSMN 942
Query: 264 QQSVTRVRRFQRELEAAEDRADTAE 338
Q R + ++ + + + E
Sbjct: 943 QAVNMNFRELDKSIQEFKRKCQSME 967
>SPAC17G6.05c |||Rhophilin-2 homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 775
Score = 30.7 bits (66), Expect = 0.18
Identities = 15/57 (26%), Positives = 34/57 (59%)
Frame = +3
Query: 42 EARMKDMELELDEEKRRHAETIKILRKKERQLKEVIIQCEEDQKNISLLQDSLEKTS 212
E + +DM+++LD + + K++ +++ L+ + +C +D + SL+Q+S K S
Sbjct: 577 EEQERDMKIQLDLLEELQSRVQKLVPERQTTLQALQQKCLQDDISESLMQNSKRKDS 633
>SPAC17A5.15c |||glutamate-tRNA ligase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 716
Score = 30.7 bits (66), Expect = 0.18
Identities = 17/28 (60%), Positives = 20/28 (71%)
Frame = -2
Query: 161 LALNYNFLELTFLLAQDLDGFSMSSLFL 78
LA N+NFLEL+ LLAQ D M SLF+
Sbjct: 98 LAGNHNFLELSSLLAQLDDHLIMRSLFV 125
>SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 750
Score = 30.3 bits (65), Expect = 0.23
Identities = 23/96 (23%), Positives = 42/96 (43%), Gaps = 1/96 (1%)
Frame = +3
Query: 24 RIISKLEARMKDMELELDEEKRRHAETIKILRKKERQLKEVIIQCEEDQKNISLLQDSLE 203
R+ +L + + E +R+ E ++ R + K + Q EED KN+ + L
Sbjct: 4 RLKDQLNMTLAQGQEEAKNRRRQFQEEDQLRRNNKSSNK--LSQNEEDAKNMDSVVQKLN 61
Query: 204 KTSQKVNIYKRQLTEQEGVSQ-QSVTRVRRFQRELE 308
+ V +++ L E+ +S Q + R F LE
Sbjct: 62 ELQNNVVAFQKLLQEKTPLSSIQDLEGFREFMENLE 97
Score = 26.6 bits (56), Expect = 2.9
Identities = 21/113 (18%), Positives = 49/113 (43%), Gaps = 7/113 (6%)
Frame = +3
Query: 33 SKLEARMKDMELELDEEKRRHAETIKILRKKERQLKEVI-------IQCEEDQKNISLLQ 191
S+L+ + ++ + E + ++K+ Q+KE + Q E + + +
Sbjct: 449 SQLKDEITSLKQTVSESEAERKRLFSSAQEKQLQMKETVNKLTSLQEQNNEFDRQLKEQE 508
Query: 192 DSLEKTSQKVNIYKRQLTEQEGVSQQSVTRVRRFQRELEAAEDRADTAESNLS 350
+ L+ +++ ++ L EQ SQ+ V + + E + + + SNLS
Sbjct: 509 EDLQNKEEELTELRKLLREQTQDSQKLRLLVEQLELERQDLKQAGENHYSNLS 561
>SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1
complex subunit Tpr1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1039
Score = 29.9 bits (64), Expect = 0.31
Identities = 26/114 (22%), Positives = 59/114 (51%), Gaps = 4/114 (3%)
Frame = +3
Query: 45 ARMKDMELELDEEK-RRHAETIKILRK---KERQLKEVIIQCEEDQKNISLLQDSLEKTS 212
A+++D ++ ++EK RR AE +L++ +ERQL+E + ++ Q+ + + S +K S
Sbjct: 869 AKLEDARIQREKEKARRLAEEEALLKEKQERERQLQE---ERQKMQEEVLEWRKSQQKAS 925
Query: 213 QKVNIYKRQLTEQEGVSQQSVTRVRRFQRELEAAEDRADTAESNLSLIRAKHRT 374
+ +Q G ++ R +R + + + D + + + L A+++T
Sbjct: 926 EDDMSLSDDEEKQSG-KKKKKDRKKRKSKSKQESSDSGVSEDDEIPLSDARNKT 978
>SPBC2A9.06c |||di-trans,
poly-cis-decaprenylcistransferase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 258
Score = 29.1 bits (62), Expect = 0.54
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Frame = +3
Query: 108 KILRKKERQLKEVIIQCEEDQKNISLLQDSLEKTSQKV--NIYKRQLTEQEGVSQQSVTR 281
K L+KK + + VII+C ED L+ D+ E ++ V NI + + E++G +QS
Sbjct: 54 KKLKKKPKHIA-VIIECVEDGGIEGLIHDACELSAWCVCSNIRELTIYERKGFLKQSPEA 112
Query: 282 VRR 290
V +
Sbjct: 113 VEK 115
>SPAC27F1.04c |nuf2||spindle pole body protein
Nuf2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 441
Score = 28.3 bits (60), Expect = 0.94
Identities = 17/105 (16%), Positives = 51/105 (48%)
Frame = +3
Query: 39 LEARMKDMELELDEEKRRHAETIKILRKKERQLKEVIIQCEEDQKNISLLQDSLEKTSQK 218
L+A+ KD+E ++ + R E+ I+++ E + +E+ ED++ S ++ ++ +
Sbjct: 151 LDAQRKDLEEKVLLSQDRKLESEAIIKQNEERNEEMFQSLIEDKRLCSQVRTEYDRIRME 210
Query: 219 VNIYKRQLTEQEGVSQQSVTRVRRFQRELEAAEDRADTAESNLSL 353
+ K + + + ++ + + Q + + ++ ++ SL
Sbjct: 211 ASELKIRYHNVDSLMASTLEEIEKLQSSIVHSPEKLKGKIADTSL 255
>SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1526
Score = 27.5 bits (58), Expect = 1.6
Identities = 18/82 (21%), Positives = 38/82 (46%)
Frame = +3
Query: 30 ISKLEARMKDMELELDEEKRRHAETIKILRKKERQLKEVIIQCEEDQKNISLLQDSLEKT 209
+ + A +K + EL+ E ++ L ++ +LKE + E+D + +SL +
Sbjct: 906 LQRESASLKQINNELESELLEKTSKVETLLSEQNELKEKLSLEEKDLLDTKGELESLREN 965
Query: 210 SQKVNIYKRQLTEQEGVSQQSV 275
+ V K + EQ Q+++
Sbjct: 966 NATVLSEKAEFNEQCKSLQETI 987
Score = 25.4 bits (53), Expect = 6.6
Identities = 21/101 (20%), Positives = 47/101 (46%), Gaps = 7/101 (6%)
Frame = +3
Query: 21 KRIISKLEARMKDMELELDEEKRRHAETIKILRKKERQ---LKEVIIQCEEDQKNISLLQ 191
K +S E + D + EL+ + +A + + Q L+E I+ + + ++
Sbjct: 942 KEKLSLEEKDLLDTKGELESLRENNATVLSEKAEFNEQCKSLQETIVTKDAELDKLTKYI 1001
Query: 192 DSLEKTSQKVNIYKRQLTE----QEGVSQQSVTRVRRFQRE 302
+ Q++ + +++ E QEG +S+ RV++ +RE
Sbjct: 1002 SDYKTEIQEMRLTNQKMNEKSIQQEGSLSESLKRVKKLERE 1042
>SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting protein
3 homolog Bud6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1385
Score = 27.5 bits (58), Expect = 1.6
Identities = 31/139 (22%), Positives = 63/139 (45%), Gaps = 13/139 (9%)
Frame = +3
Query: 126 ERQLKEVIIQCEEDQKNISLLQDS---------LEKTSQ----KVNIYKRQLTEQEGVSQ 266
ER++K V+ + +E I L++ L++TSQ + KR T + + +
Sbjct: 1018 EREVKNVVEKFDEVNDQIELMRSDVLLRKVRPGLDQTSQLNEESAYLEKRIQTLERSLEE 1077
Query: 267 QSVTRVRRFQRELEAAEDRADTAESNLSLIRAKHRTFVTTSTVPGSQVYLVPGVSCSQQ* 446
+ ++++REL A + +S+ LI R STV + V ++ Q
Sbjct: 1078 VTPIWKKQWERELNAIVQEQEFLDSHTVLISDLKRDLSALSTVLSN----VSAIAELQAK 1133
Query: 447 TSVNTLRLSIPTSERSNLR 503
+S+ + L++ T+ S ++
Sbjct: 1134 SSIKSKPLTLKTATESEIK 1152
>SPAC9E9.12c |ybt1|abc1|ABC transporter Ybt1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1427
Score = 27.1 bits (57), Expect = 2.2
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = -2
Query: 125 LLAQDLDGFSMSSLFLIQFEFHVLHTR 45
LL L FS+++LFLIQ FH HT+
Sbjct: 26 LLLFYLSLFSLTNLFLIQKLFHANHTQ 52
>SPAC29A4.09 |||rRNA processing protein Rrp17|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 27.1 bits (57), Expect = 2.2
Identities = 28/109 (25%), Positives = 52/109 (47%)
Frame = +3
Query: 15 GGKRIISKLEARMKDMELELDEEKRRHAETIKILRKKERQLKEVIIQCEEDQKNISLLQD 194
GG+ K + + E+ D+EKR+ T RK ER+ K +Q E+ ++ L
Sbjct: 10 GGEIYSRKKGKKQRLEEIVFDKEKRKEYLTGFHKRKVERR-KHAQVQLEQQKREERL--- 65
Query: 195 SLEKTSQKVNIYKRQLTEQEGVSQQSVTRVRRFQRELEAAEDRADTAES 341
+L K+ ++ KR+L E+ S++ + + E ED + ++S
Sbjct: 66 ALRKSLREQR--KRELAERLAFSKELNSSLEN-DEESSQQEDSSSKSDS 111
>SPAC23C11.14 |zhf1|zhf, zhf|zinc ion transporter
Zhf1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 387
Score = 26.6 bits (56), Expect = 2.9
Identities = 10/30 (33%), Positives = 20/30 (66%)
Frame = -2
Query: 140 LELTFLLAQDLDGFSMSSLFLIQFEFHVLH 51
+++TF + + G+++ SL LI FH+L+
Sbjct: 16 IDVTFFFIEIITGYAIDSLALIADSFHMLN 45
>SPBC146.05c |cwf25||complexed with Cdc5 protein Cwf25
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 376
Score = 26.6 bits (56), Expect = 2.9
Identities = 16/41 (39%), Positives = 27/41 (65%)
Frame = +3
Query: 27 IISKLEARMKDMELELDEEKRRHAETIKILRKKERQLKEVI 149
I S+L+ +M+D ELDE +R+ I++L KKER ++ +
Sbjct: 293 IESRLQ-KMQDNAKELDESRRK---KIELLEKKERDEEQFL 329
>SPCC16A11.04 |snx12||sorting nexin Snx12 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1010
Score = 26.6 bits (56), Expect = 2.9
Identities = 28/134 (20%), Positives = 56/134 (41%), Gaps = 12/134 (8%)
Frame = +3
Query: 21 KRIISKLEARMKDMELELDEEK-----RRHAETIKILRKKERQLKEVIIQCEEDQK---- 173
K ++ + +K EL D+++ + H E K + +KERQ + + Q EED K
Sbjct: 640 KAQLNAINTLIKKAELVADQKQLKSLTKNHQEIEKAIHRKERQRDQYMSQ-EEDSKLFNR 698
Query: 174 ---NISLLQDSLEKTSQKVNIYKRQLTEQEGVSQQSVTRVRRFQRELEAAEDRADTAESN 344
+I + S E+ + +Y ++ E +S V R RE +
Sbjct: 699 SRVSIDSFKISKEENTPDFAVYTIRIERLENGHVRSGWMVARRYREFAELHKQLKQTYPG 758
Query: 345 LSLIRAKHRTFVTT 386
+ ++ ++ +T+
Sbjct: 759 VRSLKFPQKSIITS 772
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 26.2 bits (55), Expect = 3.8
Identities = 22/102 (21%), Positives = 46/102 (45%)
Frame = +3
Query: 33 SKLEARMKDMELELDEEKRRHAETIKILRKKERQLKEVIIQCEEDQKNISLLQDSLEKTS 212
+K EA K + E +E+ +R AE K R+ E K + + + + +++ EK
Sbjct: 633 AKREAEEK-AKREAEEKAKREAEE-KAKREAEENAKREAEEKAKREAEENAKREAEEKVK 690
Query: 213 QKVNIYKRQLTEQEGVSQQSVTRVRRFQRELEAAEDRADTAE 338
++ ++ E+EG + + L ++E DT++
Sbjct: 691 RETEENAKRKAEEEGKREADKNPEIKSSAPLASSEANVDTSK 732
>SPAC23C11.16 |plo1||Polo kinase Plo1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 683
Score = 26.2 bits (55), Expect = 3.8
Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +3
Query: 66 LELDEEKRRHAETIKILRKKERQLKEVIIQCEEDQKNISLLQDSLEKTSQKVNIYKR-QL 242
L+ D+ K + IK+ + I C ED NI L+ + E S + KR QL
Sbjct: 76 LQNDKTKLKLFGEIKVHQSMSHPNIVGFIDCFEDSTNIYLILELCEHKSLMELLRKRKQL 135
Query: 243 TEQE 254
TE E
Sbjct: 136 TEPE 139
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 25.8 bits (54), Expect = 5.0
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -2
Query: 299 ALESSNSCHTLLGYTLLFGQLPLVDVDFLGSF 204
A+E N+C L +LF + +V +D LGSF
Sbjct: 1440 AVEFINACEILDLNLVLFNAVSMVFIDALGSF 1471
>SPBC4F6.14 |||RNA-binding protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 674
Score = 25.8 bits (54), Expect = 5.0
Identities = 14/53 (26%), Positives = 27/53 (50%)
Frame = +3
Query: 138 KEVIIQCEEDQKNISLLQDSLEKTSQKVNIYKRQLTEQEGVSQQSVTRVRRFQ 296
KE+ + EE+ N+ ++DS + +S K N ++ + EG+ R F+
Sbjct: 236 KELAGESEEEGSNVDDVEDSGDSSSDK-NSINHEIRDNEGLEDTVFVRNLLFE 287
>SPBC405.02c ||SPBC4C3.01|sequence orphan|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 447
Score = 25.8 bits (54), Expect = 5.0
Identities = 22/87 (25%), Positives = 38/87 (43%)
Frame = +3
Query: 162 EDQKNISLLQDSLEKTSQKVNIYKRQLTEQEGVSQQSVTRVRRFQRELEAAEDRADTAES 341
+ + N+S LQD+ TSQ N+ ++ G+S S R ++ + +S
Sbjct: 287 DSKPNLSTLQDNASLTSQGSNL----SSQNSGLSSSSSGIFGRMPIPAQSLDTTMLRTDS 342
Query: 342 NLSLIRAKHRTFVTTSTVPGSQVYLVP 422
N S IR +F+ S S ++ P
Sbjct: 343 N-SNIRRATTSFIANSEKENSSNFIDP 368
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 25.4 bits (53), Expect = 6.6
Identities = 22/118 (18%), Positives = 53/118 (44%), Gaps = 11/118 (9%)
Frame = +3
Query: 63 ELELDEEKRRHAET----IKILRKKERQLKEVIIQCEEDQKNISLLQDSLEKTSQKVNIY 230
+++L E+KR + + KIL +KE+ + E ++ +L + + +V
Sbjct: 246 KIQLFEQKRSNYSSDGNISKILETDPTSIKELEEEVETQKRLTALWESKSSELQSEVAAL 305
Query: 231 KRQLTEQEGVSQQSVTRVRRFQRELEAAE-------DRADTAESNLSLIRAKHRTFVT 383
+ +LT Q+ + + +++L +E ++ D+ S L +++ T V+
Sbjct: 306 QEKLTSQQSLYNNVTEELNNNKQQLLISENSLRELQEKYDSVVSELQVVKENKNTSVS 363
>SPAPB1E7.07 |glt1||glutamate synthase Glt1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2111
Score = 25.4 bits (53), Expect = 6.6
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +1
Query: 64 NSNWMRKREDMLKPSR 111
N NWM RE ++K SR
Sbjct: 312 NKNWMHAREGLMKSSR 327
>SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein
Pkl1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 832
Score = 25.4 bits (53), Expect = 6.6
Identities = 19/90 (21%), Positives = 48/90 (53%), Gaps = 2/90 (2%)
Frame = +3
Query: 102 TIKILRKKERQLKEVIIQCEEDQKNISLLQDSLEKTSQKV--NIYKRQLTEQEGVSQQSV 275
T KILR KE+ L + ++ +E+ IS ++ + T +K+ I + ++ +E S++S
Sbjct: 314 TEKILRFKEKILDLLEMKQQEENDRISHIEYENDLTVKKLKRRISELEMAVKEYESEKSY 373
Query: 276 TRVRRFQRELEAAEDRADTAESNLSLIRAK 365
+ + ++ ++ + + + + ++R K
Sbjct: 374 SE-KEYEEKISSLRIELEDKLAEIDMLRNK 402
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 25.4 bits (53), Expect = 6.6
Identities = 28/116 (24%), Positives = 48/116 (41%), Gaps = 3/116 (2%)
Frame = +3
Query: 39 LEARMKDME---LELDEEKRRHAETIKILRKKERQLKEVIIQCEEDQKNISLLQDSLEKT 209
L RM D++ +L K +E ++ LR E + + +C+ + LQD L
Sbjct: 1620 LTTRMLDLQNQVKDLSNIKDSLSEDLRTLRSLEDSVASLQKECKIKSNTVESLQDVL--- 1676
Query: 210 SQKVNIYKRQLTEQEGVSQQSVTRVRRFQRELEAAEDRADTAESNLSLIRAKHRTF 377
++ R ++ VS +SV ++RR E + S L +H TF
Sbjct: 1677 ---TSVQARNAELEDEVS-RSVDKIRRRDDRCEHLSGKLKKLHSQL---EEQHETF 1725
>SPBC16D10.04c |dna2||DNA replication endonuclease-helicase
Dna2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1398
Score = 25.0 bits (52), Expect = 8.8
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +2
Query: 353 DTCQAPHFRHHLHRPWL 403
D+C RH LH PWL
Sbjct: 829 DSCIEVRTRHRLHIPWL 845
>SPAC21E11.03c |pcr1|mts2|transcription factor
Pcr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 171
Score = 25.0 bits (52), Expect = 8.8
Identities = 26/99 (26%), Positives = 45/99 (45%), Gaps = 5/99 (5%)
Frame = +3
Query: 39 LEARMKDMELELDEEKRRHAETIKILRKKERQLKEVIIQCEEDQKNISL-----LQDSLE 203
+ A+ K+++ DE++RR E +I K RQ K+ I+ E N + LQ L
Sbjct: 1 MTAKKKEVD---DEKRRRILERNRIAASKFRQKKKEWIKELEQTANAAFEQSKRLQLLLS 57
Query: 204 KTSQKVNIYKRQLTEQEGVSQQSVTRVRRFQRELEAAED 320
+ Q+ K QL +G Q ++R + + A +
Sbjct: 58 QLQQEAFRLKSQLLAHQGC--QCSVKIRSVLTDFQTAHN 94
>SPAC637.06 |||alpha-1,2-galactosyltransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 347
Score = 25.0 bits (52), Expect = 8.8
Identities = 10/22 (45%), Positives = 17/22 (77%)
Frame = -2
Query: 137 ELTFLLAQDLDGFSMSSLFLIQ 72
++ F+L QD +GFS+ S FL++
Sbjct: 209 DINFILGQDCNGFSLGS-FLVR 229
>SPAC57A7.06 |||U3 snoRNP protein Utp14 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 929
Score = 25.0 bits (52), Expect = 8.8
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +3
Query: 117 RKKERQLKEVIIQCEEDQKNISLLQDSLEKTSQKVNIYKRQL 242
++K+ +LK VII + ++K L DS+ + Y+R L
Sbjct: 851 KRKDSKLKHVIINEKRNKKAAKLTADSVPFPFESREQYERSL 892
>SPBC1709.15c |cft2||cleavage factor two Cft2/polyadenylation factor
CPSF-73 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 797
Score = 25.0 bits (52), Expect = 8.8
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +3
Query: 36 KLEARMKDMELELDEEKRRHAETIKIL 116
K E KD + E +EEK+ ET+ +L
Sbjct: 684 KEEVEKKDGDKERNEEKKEEKETLPVL 710
>SPAC4F8.13c |rng2||IQGAP|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1489
Score = 25.0 bits (52), Expect = 8.8
Identities = 17/70 (24%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Frame = +3
Query: 216 KVNIYKRQLTEQEGVSQQSVTRVRRFQRELEAAEDRADTAESNLSLIRAK--HRTFVTTS 389
K + K + + ++ Q++ R ++ LE+ D +S+LS+I+A+ +R F+T +
Sbjct: 556 KEKLEKLKASTSSFIALQAIVRAFLLRKNLESIYDSFQ--KSHLSVIKAQSLYRGFITRT 613
Query: 390 TVPGSQVYLV 419
+ YL+
Sbjct: 614 KIDYCNDYLL 623
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,545,938
Number of Sequences: 5004
Number of extensions: 52510
Number of successful extensions: 248
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 235
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 246
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 271646730
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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