Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_C04
         (618 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    24   1.4  
DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    23   1.8  
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    23   1.8  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    23   1.8  
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    23   1.8  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    23   3.2  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   4.2  
AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin prot...    22   4.2  
AB073996-1|BAC76400.1|  215|Apis mellifera preprotachykinin prot...    22   4.2  
AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin prot...    22   4.2  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              21   7.3  
EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle pr...    21   9.6  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    21   9.6  

>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = -2

Query: 206 FLQGILQKRNVLLVFLALNYNFLELTFLLAQD 111
           FLQG++ K N +++      N    TFL A D
Sbjct: 698 FLQGVVTKSNPVMIITEFMENGSLDTFLRAND 729


>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -1

Query: 360 HVSKRGCSQQYRRGLPQLPVRV 295
           H +  GC+ + R+  P  P+RV
Sbjct: 437 HTTTNGCTAELRKKEPPHPIRV 458


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -1

Query: 360 HVSKRGCSQQYRRGLPQLPVRV 295
           H +  GC+ + R+  P  P+RV
Sbjct: 423 HTTTNGCTAELRKKEPPHPIRV 444


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -1

Query: 360 HVSKRGCSQQYRRGLPQLPVRV 295
           H +  GC+ + R+  P  P+RV
Sbjct: 457 HTTTNGCTAELRKKEPPHPIRV 478


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -1

Query: 360 HVSKRGCSQQYRRGLPQLPVRV 295
           H +  GC+ + R+  P  P+RV
Sbjct: 406 HTTTNGCTAELRKKEPPHPIRV 427


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
            protein.
          Length = 1308

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 13/33 (39%), Positives = 16/33 (48%)
 Frame = -2

Query: 293  ESSNSCHTLLGYTLLFGQLPLVDVDFLGSFLQG 195
            + S   H L G TLL  Q+ LV    + S L G
Sbjct: 1007 QQSPQQHVLPGKTLLASQIKLVSPGQIKSLLTG 1039


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +2

Query: 20   QAHHKQTGSAYEGHG 64
            +A  +QTGS + GHG
Sbjct: 1921 EAPSRQTGSGHGGHG 1935


>AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin
           protein.
          Length = 339

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 17/63 (26%), Positives = 27/63 (42%)
 Frame = +3

Query: 189 QDSLEKTSQKVNIYKRQLTEQEGVSQQSVTRVRRFQRELEAAEDRADTAESNLSLIRAKH 368
           Q+S    S+   I+KR L   +GV  +  + +   + EL   ED    A      +R K 
Sbjct: 41  QNSASLNSENFGIFKRALMGFQGVRGKKNSIINDVKNEL-FPEDINKRAPMGFQGMRGKK 99

Query: 369 RTF 377
            +F
Sbjct: 100 ASF 102


>AB073996-1|BAC76400.1|  215|Apis mellifera preprotachykinin
           protein.
          Length = 215

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 17/63 (26%), Positives = 27/63 (42%)
 Frame = +3

Query: 189 QDSLEKTSQKVNIYKRQLTEQEGVSQQSVTRVRRFQRELEAAEDRADTAESNLSLIRAKH 368
           Q+S    S+   I+KR L   +GV  +  + +   + EL   ED    A      +R K 
Sbjct: 41  QNSASLNSENFGIFKRALMGFQGVRGKKNSIINDVKNEL-FPEDINKRAPMGFQGMRGKK 99

Query: 369 RTF 377
            +F
Sbjct: 100 ASF 102


>AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin
           protein.
          Length = 301

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 17/63 (26%), Positives = 27/63 (42%)
 Frame = +3

Query: 189 QDSLEKTSQKVNIYKRQLTEQEGVSQQSVTRVRRFQRELEAAEDRADTAESNLSLIRAKH 368
           Q+S    S+   I+KR L   +GV  +  + +   + EL   ED    A      +R K 
Sbjct: 41  QNSASLNSENFGIFKRALMGFQGVRGKKNSIINDVKNEL-FPEDINKRAPMGFQGMRGKK 99

Query: 369 RTF 377
            +F
Sbjct: 100 ASF 102


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 13/43 (30%), Positives = 21/43 (48%)
 Frame = +3

Query: 144 VIIQCEEDQKNISLLQDSLEKTSQKVNIYKRQLTEQEGVSQQS 272
           VII+C+E   N    Q  L+  +  V  YK ++  +  +S  S
Sbjct: 710 VIIECQEPVTNRPTGQLLLDYLTDTVLAYKPKILGKPTISPDS 752


>EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle
           protein protein.
          Length = 138

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = +1

Query: 493 PTYAPLPAFLSXSLNWGA 546
           PT  P+P  +  +L W A
Sbjct: 104 PTAPPIPPEIQRALEWNA 121


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -2

Query: 344 VALSSIGAVFRSFQFALESSNSC 276
           + L S+ AV R+F  +    NSC
Sbjct: 357 LCLDSMNAVIRNFNESENRRNSC 379


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,173
Number of Sequences: 438
Number of extensions: 4333
Number of successful extensions: 14
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18337950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)