Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_C03
         (437 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF213011-1|AAG43567.1|   62|Apis mellifera esterase A2 protein.        25   0.48 
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    23   1.1  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    23   1.1  
DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    23   1.5  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   4.5  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    21   7.9  

>AF213011-1|AAG43567.1|   62|Apis mellifera esterase A2 protein.
          Length = 62

 Score = 24.6 bits (51), Expect = 0.48
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +2

Query: 290 YISLSKTFSEMNPDYFTMANKIYVGHKY 373
           +IS + +F EM PDY    + + V   Y
Sbjct: 29  FISGTSSFHEMRPDYLLPKDVVVVSSNY 56


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +3

Query: 9   IKLCLLAVIAVCNVRAFIPLTTSTT 83
           + + LLA + VC +  F+ L T TT
Sbjct: 553 LTIILLAGVLVCYLNTFLLLATPTT 577


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +3

Query: 9   IKLCLLAVIAVCNVRAFIPLTTSTT 83
           + + LLA + VC +  F+ L T TT
Sbjct: 643 LTIILLAGVLVCYLNTFLLLATPTT 667


>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = -2

Query: 415 LVLTDSDREFLIQSIFMSDVDFIGHSEVIRIHLRE 311
           L+LT+SD +   Q I   DV+   +SEV +   +E
Sbjct: 366 LILTESDTKLSSQGILGEDVE--NNSEVSKSRTKE 398


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = +1

Query: 235 CGDRQVFRQW 264
           CG  Q FR+W
Sbjct: 648 CGQEQAFRKW 657


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +3

Query: 330 ITSLWPIKSTSDINILW 380
           IT+LW     +D+N+ W
Sbjct: 71  ITNLWLKLEWNDVNMRW 87


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,264
Number of Sequences: 438
Number of extensions: 2694
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11327868
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)