Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_C02
(505 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC3F6.02c |||3 beta-hydroxysteroid dehydrogenase/delta 5-->4-i... 34 0.014
SPBC365.14c |||UDP-glucose 4-epimerase |Schizosaccharomyces pomb... 32 0.043
SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyc... 31 0.13
SPBPB2B2.11 |||nucleotide-sugar 4,6-dehydratase |Schizosaccharom... 30 0.17
SPBC211.03c |||guanyl-nucleotide exchange factor|Schizosaccharom... 29 0.40
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 29 0.52
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 27 1.2
SPBC2A9.02 |||NAD dependent epimerase/dehydratase family protein... 27 1.2
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 27 2.1
SPBC27B12.04c |||conserved eukaryotic protein|Schizosaccharomyce... 27 2.1
SPAC18G6.09c |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 26 3.7
SPAC513.07 |||flavonol reductase/cinnamoyl-CoA reductase family|... 26 3.7
SPAC20G8.06 |||CCR4-Not complex subunit Not1 |Schizosaccharomyce... 25 4.9
SPAC3G6.01 |hrp3||ATP-dependent DNA helicase Hrp3|Schizosaccharo... 25 6.5
SPBC947.06c |||spermidine family transporter |Schizosaccharomyce... 25 6.5
SPBP23A10.14c |ell1||RNA polymerase II transcription elongation ... 25 8.5
SPAC13F5.02c |ptr6|taf7|transcription factor TFIID complex subun... 25 8.5
SPAP7G5.04c |lys1||aminoadipate-semialdehyde dehydrogenase |Schi... 25 8.5
>SPBC3F6.02c |||3 beta-hydroxysteroid dehydrogenase/delta
5-->4-isomerase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 340
Score = 33.9 bits (74), Expect = 0.014
Identities = 40/153 (26%), Positives = 71/153 (46%), Gaps = 4/153 (2%)
Frame = +3
Query: 57 VVVTGAGGFLGSRVADFLLGSDSPLHVTELVLSGSRLPASRDDPRVRLLAVDLSKPGAGD 236
V+V G+G FLG + L ++ L + L + + + DL+K G +
Sbjct: 6 VLVIGSG-FLGGHIIRQLCEREN-LRIAAFDLFENEKLLHELHGQFTMYTGDLTKQGDIE 63
Query: 237 QLIDA-NTDVFFHMAAVVSGHAEAEFDYGFKVNFDATRELLETARKRAPNLKFVYTSAVA 413
++ + + V H A+ V A D F+VN D T +++ +K + VYTS+
Sbjct: 64 RVFEEFHPRVVIHTASPVHNLAR---DIYFEVNVDGTANIIKACQKFNVD-ALVYTSSAG 119
Query: 414 VF--GGDLPSVVD-DTIAVMPQNSYGTAKAISE 503
V G DL +V + I + ++Y +KA++E
Sbjct: 120 VVFNGADLINVDESQPIPEVHMDAYNESKALAE 152
>SPBC365.14c |||UDP-glucose 4-epimerase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 355
Score = 32.3 bits (70), Expect = 0.043
Identities = 35/131 (26%), Positives = 56/131 (42%), Gaps = 9/131 (6%)
Frame = +3
Query: 57 VVVTGAGGFLGSRVADFLLGSDSPLHVTELVLSGSRLPA-----SRDDPRVRLLAVD-LS 218
V+VTG G++GS LL + + + L SR+ A +V VD L
Sbjct: 9 VLVTGGAGYIGSHTCVVLLEKGYDVVIVD-NLCNSRVEAVHRIEKLTGKKVIFHQVDLLD 67
Query: 219 KPGAGDQLIDANTDVFFHMAAV--VSGHAEAEFDYGFKVNFDATRELLETARKRAPNLK- 389
+P + N H A + V + Y +K N T L+E +K N++
Sbjct: 68 EPALDKVFANQNISAVIHFAGLKAVGESVQVPLSY-YKNNISGTINLIECMKKY--NVRD 124
Query: 390 FVYTSAVAVFG 422
FV++S+ V+G
Sbjct: 125 FVFSSSATVYG 135
>SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1016
Score = 30.7 bits (66), Expect = 0.13
Identities = 14/47 (29%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Frame = -2
Query: 228 LRVWTDRLREAGLEDRLAKLVGVNQIALAR--LHATGNLIPKENQPH 94
+++W + ++ +EDR ++G+ + AL + L+A GN+ P QP+
Sbjct: 581 MKLWGQVIGDSDMEDRANIILGIERNALNKYMLYADGNVQPTSMQPN 627
>SPBPB2B2.11 |||nucleotide-sugar 4,6-dehydratase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 365
Score = 30.3 bits (65), Expect = 0.17
Identities = 40/167 (23%), Positives = 67/167 (40%), Gaps = 22/167 (13%)
Frame = +3
Query: 60 VVTGAGGFLGSRVADFLLGSDSPLHVT-----ELVLSGSRLPASR--DDPRVRLLAVDLS 218
++TG GF+GS D+ + H T V + + + S+ + P R L +DL+
Sbjct: 13 LITGGAGFIGSNFLDYAVDKYPDFHFTCIDKLSYVSNYTTVFLSKVLNQPNFRFLEMDLA 72
Query: 219 KPGAGDQLIDANTDVFFHMAAVVSGHAEAEFDYGF-------KVNFDATRELLETAR--- 368
+ +++ AE+ D F K N +T+ LLE R
Sbjct: 73 TNYKFLYQFMVEDSEINKITHIINFAAESSVDRSFIDPLYFTKNNILSTQNLLECVRILL 132
Query: 369 ----KRAPNLKFVYTSAVAVFG-GDLPSVVDDTIAVMPQNSYGTAKA 494
+ L FV+ S V+G D + VD+ + P + Y +KA
Sbjct: 133 GKKEELRNRLNFVHVSTDEVYGEQDENASVDEKSKLNPTSPYAASKA 179
>SPBC211.03c |||guanyl-nucleotide exchange
factor|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1462
Score = 29.1 bits (62), Expect = 0.40
Identities = 26/102 (25%), Positives = 40/102 (39%)
Frame = +3
Query: 84 LGSRVADFLLGSDSPLHVTELVLSGSRLPASRDDPRVRLLAVDLSKPGAGDQLIDANTDV 263
L RV L S H+ +S R D +RLL PG QLI+ +
Sbjct: 595 LSKRVLGEFLTKGSNSHILNAFISAFDFKGKRIDEALRLLLQSFRLPGE-SQLIERVLET 653
Query: 264 FFHMAAVVSGHAEAEFDYGFKVNFDATRELLETARKRAPNLK 389
F H + + + D F +++ +L T + PN+K
Sbjct: 654 FSHYYMSANPDSMSSKDAAFVLSYSII--MLNTDQHN-PNIK 692
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 28.7 bits (61), Expect = 0.52
Identities = 21/72 (29%), Positives = 37/72 (51%)
Frame = -1
Query: 460 TAIVSSTTEGRSPPKTATALV*TNFKLGARFLAVSKSSRVASKLTLNP*SNSASAWPLTT 281
T I SST SPP T++ +V ++ + + V+ S+ + S +N + S+ L T
Sbjct: 1642 TPITSSTALNTSPPITSSTVVNSSTPITSS-TVVNTSTPITSSTVVNSSTPITSSTALNT 1700
Query: 280 AAMWKNTSVLAS 245
+ ++SVL S
Sbjct: 1701 STPITSSSVLNS 1712
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 27.5 bits (58), Expect = 1.2
Identities = 24/126 (19%), Positives = 52/126 (41%), Gaps = 4/126 (3%)
Frame = -1
Query: 460 TAIVSSTTEGRSPPKTATALV*TNFKLGARFLA----VSKSSRVASKLTLNP*SNSASAW 293
++I+SS++ S P + ++ + ++ + + +S SS +S + S+S S+
Sbjct: 270 SSIISSSSSSSSSPTSTSSTISSSSSSSSSPTSTSSTISSSSSSSSSFSSTLSSSSMSSS 329
Query: 292 PLTTAAMWKNTSVLASIS*SPAPGLDXXXXXXXXXXXXXXXXXXEPDSTSSVTCNGESDP 113
+++ ++S ++S S SP+ STSS T S
Sbjct: 330 SSFSSSPTSSSSTISSSSSSPSSSSFSSTTSSSKSSSSFSSTVSSSSSTSSSTLTSSSSS 389
Query: 112 KRKSAT 95
+ A+
Sbjct: 390 SSRPAS 395
Score = 25.0 bits (52), Expect = 6.5
Identities = 16/73 (21%), Positives = 28/73 (38%)
Frame = -1
Query: 313 SNSASAWPLTTAAMWKNTSVLASIS*SPAPGLDXXXXXXXXXXXXXXXXXXEPDSTSSVT 134
S +SA P +T++ + ++S + S S SP+ STSS
Sbjct: 195 STFSSAAPTSTSSSYLSSSSVVSSSSSPSSSSSSTLTSSSLSTSSIPSTSSSSSSTSSSL 254
Query: 133 CNGESDPKRKSAT 95
+ S S++
Sbjct: 255 SSSSSSSTASSSS 267
>SPBC2A9.02 |||NAD dependent epimerase/dehydratase family
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 295
Score = 27.5 bits (58), Expect = 1.2
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +3
Query: 51 MKVVVTGAGGFLGSRVADFLL 113
M++ VTGA GF+GS + LL
Sbjct: 1 MRIFVTGAAGFIGSEIVRQLL 21
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 26.6 bits (56), Expect = 2.1
Identities = 21/102 (20%), Positives = 41/102 (40%), Gaps = 2/102 (1%)
Frame = -1
Query: 358 SKSSRVASKLTLNP*SNSASAWPLTTAAMWKNTSVLASIS*SPAPGLDXXXXXXXXXXXX 179
S S ++ T +P S+S+S+ ++++ ++S +S S S +
Sbjct: 142 SSPSSSSTTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 201
Query: 178 XXXXXXEP--DSTSSVTCNGESDPKRKSATREPKNPPAPVTT 59
P STSS + S S++ P + + +TT
Sbjct: 202 SSSSSSVPITSSTSSSHSSSSSSSSSSSSSSRPSSSSSFITT 243
>SPBC27B12.04c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 817
Score = 26.6 bits (56), Expect = 2.1
Identities = 16/57 (28%), Positives = 28/57 (49%)
Frame = -2
Query: 186 DRLAKLVGVNQIALARLHATGNLIPKENQPHASLKTHRHRSLQLSYLLVGLKKKTVN 16
+++ K + + +AR + NL PH L+ + + L+LS +GLK K N
Sbjct: 646 EKVCKYSNIRKEIIARSNLHENLKKLLAIPHDKLRLYALKVLKLSVPFLGLKWKQAN 702
>SPAC18G6.09c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 312
Score = 25.8 bits (54), Expect = 3.7
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = -2
Query: 135 HATGNLIPKENQPHASLKTHRHRSLQLSY 49
H TGN+ P N P+ + H +L L +
Sbjct: 267 HPTGNITPTLNSPNNGIHCHSTSALDLLF 295
>SPAC513.07 |||flavonol reductase/cinnamoyl-CoA reductase
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 336
Score = 25.8 bits (54), Expect = 3.7
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +3
Query: 57 VVVTGAGGFLGSRVADFLL 113
V+VTG GF+G+ VA+ LL
Sbjct: 6 VLVTGVTGFIGAHVAEQLL 24
>SPAC20G8.06 |||CCR4-Not complex subunit Not1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2100
Score = 25.4 bits (53), Expect = 4.9
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +3
Query: 366 RKRAPNLKFVYTSAVAVFGGDLPSVVDDTIAVMPQ 470
RK PNL FV + A +LPSV+ + + PQ
Sbjct: 1272 RKTTPNLPFVDPAGAANLHLNLPSVLKLSSELTPQ 1306
>SPAC3G6.01 |hrp3||ATP-dependent DNA helicase Hrp3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1388
Score = 25.0 bits (52), Expect = 6.5
Identities = 8/26 (30%), Positives = 17/26 (65%)
Frame = -1
Query: 151 STSSVTCNGESDPKRKSATREPKNPP 74
S+ +++ NG++ PK+++A R P
Sbjct: 1209 SSPAISTNGKTQPKKQTANRRQSGKP 1234
>SPBC947.06c |||spermidine family transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 498
Score = 25.0 bits (52), Expect = 6.5
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -1
Query: 157 PDSTSSVTCNGESDPKR 107
PDS VT NGE DP++
Sbjct: 30 PDSDFLVTFNGEDDPEK 46
>SPBP23A10.14c |ell1||RNA polymerase II transcription elongation
factor SpELL|Schizosaccharomyces pombe|chr 2|||Manual
Length = 533
Score = 24.6 bits (51), Expect = 8.5
Identities = 14/36 (38%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Frame = -1
Query: 157 PDSTSSVTCNGESDP--KRKSATREPKNPPAPVTTT 56
P SS TC+ S P KRKS + P P T+
Sbjct: 395 PSPGSSTTCSNLSSPHIKRKSRSPPQSLPSTPFPTS 430
>SPAC13F5.02c |ptr6|taf7|transcription factor TFIID complex subunit
Taf7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 393
Score = 24.6 bits (51), Expect = 8.5
Identities = 14/28 (50%), Positives = 14/28 (50%), Gaps = 2/28 (7%)
Frame = -1
Query: 154 DSTSSVTCNGESDP--KRKSATREPKNP 77
DS SS G P K K TREPK P
Sbjct: 15 DSRSSTPATGPPPPIPKIKIKTREPKGP 42
>SPAP7G5.04c |lys1||aminoadipate-semialdehyde dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1419
Score = 24.6 bits (51), Expect = 8.5
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +3
Query: 57 VVVTGAGGFLGSRVADFLLGSDSPLHVTELVLSGS 161
V +TGA G+LG + L+ S L V LV + S
Sbjct: 1007 VFLTGANGYLGVFILRDLMTRSSNLKVIALVRASS 1041
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,972,971
Number of Sequences: 5004
Number of extensions: 38056
Number of successful extensions: 148
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 136
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 148
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 200198394
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -