Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_C02
(505 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g30620.1 68414.m03745 UDP-D-xylose 4-epimerase, putative (MUR... 45 3e-05
At1g78570.1 68414.m09157 NAD-dependent epimerase/dehydratase fam... 44 6e-05
At5g44480.1 68418.m05450 NAD-dependent epimerase/dehydratase fam... 44 8e-05
At4g33360.1 68417.m04743 terpene cyclase/mutase-related low simi... 43 1e-04
At1g53500.1 68414.m06066 NAD-dependent epimerase/dehydratase fam... 43 1e-04
At4g20460.1 68417.m02985 NAD-dependent epimerase/dehydratase fam... 42 2e-04
At3g14790.1 68416.m01869 NAD-dependent epimerase/dehydratase fam... 42 2e-04
At4g27250.1 68417.m03912 dihydroflavonol 4-reductase family / di... 40 0.001
At3g53520.2 68416.m05910 NAD-dependent epimerase/dehydratase fam... 40 0.001
At3g53520.1 68416.m05909 NAD-dependent epimerase/dehydratase fam... 40 0.001
At2g33590.1 68415.m04117 cinnamoyl-CoA reductase family similar ... 38 0.003
At3g62830.1 68416.m07059 NAD-dependent epimerase/dehydratase fam... 37 0.007
At2g47650.1 68415.m05950 NAD-dependent epimerase/dehydratase fam... 37 0.007
At2g28760.2 68415.m03498 NAD-dependent epimerase/dehydratase fam... 37 0.009
At2g28760.1 68415.m03497 NAD-dependent epimerase/dehydratase fam... 37 0.009
At2g33600.1 68415.m04118 cinnamoyl-CoA reductase family similar ... 36 0.020
At3g46440.1 68416.m05034 NAD-dependent epimerase/dehydratase fam... 35 0.036
At5g59290.1 68418.m07429 UDP-glucuronic acid decarboxylase (UXS3... 34 0.063
At1g64440.1 68414.m07304 UDP-glucose 4-epimerase, putative / UDP... 33 0.14
At1g76470.1 68414.m08895 cinnamoyl-CoA reductase family similar ... 31 0.33
At2g02400.1 68415.m00180 cinnamoyl-CoA reductase family similar ... 30 1.0
At5g28840.1 68418.m03547 NAD-dependent epimerase/dehydratase fam... 29 1.3
At5g19440.1 68418.m02316 cinnamyl-alcohol dehydrogenase, putativ... 29 1.3
At3g04550.1 68416.m00483 expressed protein 29 1.3
At1g10000.1 68414.m01128 expressed protein 29 1.8
At4g23920.1 68417.m03440 UDP-glucose 4-epimerase, putative / UDP... 29 2.4
At5g42800.1 68418.m05213 dihydroflavonol 4-reductase (dihydrokae... 28 3.1
At5g04370.1 68418.m00429 S-adenosyl-L-methionine:carboxyl methyl... 28 4.1
At5g38350.1 68418.m04628 disease resistance protein (NBS-LRR cla... 27 5.4
At1g04810.1 68414.m00477 26S proteasome regulatory subunit, puta... 27 5.4
At1g04120.1 68414.m00401 ABC transporter family protein Strong s... 27 5.4
At2g34450.1 68415.m04227 high mobility group (HMG1/2) family pro... 27 7.2
At1g80750.1 68414.m09474 60S ribosomal protein L7 (RPL7A) simila... 27 7.2
At5g14570.1 68418.m01708 transporter, putative similar to trans-... 27 9.5
At2g21280.1 68415.m02533 expressed protein similar to YfhF (GI:2... 27 9.5
At1g77720.1 68414.m09049 protein kinase family protein contains ... 27 9.5
>At1g30620.1 68414.m03745 UDP-D-xylose 4-epimerase, putative (MUR4)
similar to SP|P55180 UDP-glucose 4-epimerase (EC
5.1.3.2) from Bacillus subtilis, GI:3021357
UDP-galactose 4-epimerase from Cyamopsis tetragonoloba;
contains Pfam profile PF01370 NAD dependent
epimerase/dehydratase family; contains TIGRfam profile
TIGR01179: UDP-glucose 4-epimerase
Length = 419
Score = 45.2 bits (102), Expect = 3e-05
Identities = 45/159 (28%), Positives = 71/159 (44%), Gaps = 10/159 (6%)
Frame = +3
Query: 57 VVVTGAGGFLGSRVADFLLGSDSPLHVTELVLSGSRLPASR-------DDPRVRLLAVDL 215
V+VTG G++GS A LL + + + LS L A R + R++ + DL
Sbjct: 73 VLVTGGAGYIGSHAALRLLKESYRVTIVDN-LSRGNLAAVRILQELFPEPGRLQFIYADL 131
Query: 216 SKPGAGDQLIDANT-DVFFHMAAVVSGHAEAEFDYGFKVNFDA-TRELLETARKRAPNLK 389
A +++ N D H AAV +F + N + T +LET
Sbjct: 132 GDAKAVNKIFTENAFDAVMHFAAVAYVGESTQFPLKYYHNITSNTLVVLETMAAHGVKT- 190
Query: 390 FVYTSAVAVFGG-DLPSVVDDTIAVMPQNSYGTAKAISE 503
+Y+S A +G D+ + ++T V P N YG AK ++E
Sbjct: 191 LIYSSTCATYGEPDIMPITEETPQV-PINPYGKAKKMAE 228
>At1g78570.1 68414.m09157 NAD-dependent epimerase/dehydratase family
protein similar to dTDP-glucose 4,6-dehydratase from
Aneurinibacillus thermoaerophilus GI:16357461, RmlB from
Leptospira borgpetersenii GI:4234803; contains Pfam
profile PF01370 NAD dependent epimerase/dehydratase
family
Length = 669
Score = 44.0 bits (99), Expect = 6e-05
Identities = 45/161 (27%), Positives = 71/161 (44%), Gaps = 12/161 (7%)
Frame = +3
Query: 57 VVVTGAGGFLGSRVADFLLGS--DSPLHVTELVLSGSRLP---ASRDDPRVRLLAVDLSK 221
+++TGA GF+ S VA+ L+ S D + V + + S L S+ P + + D++
Sbjct: 9 ILITGAAGFIASHVANRLIRSYPDYKIVVLDKLDYCSNLKNLNPSKHSPNFKFVKGDIAS 68
Query: 222 PG-AGDQLIDANTDVFFHMAAVVSGHAEAEFDYGF---KVNFDATRELLETARKRAPNLK 389
LI D H AA H + F F K N T LLE + +
Sbjct: 69 ADLVNHLLITEGIDTIMHFAA--QTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRR 126
Query: 390 FVYTSAVAVFG-GDLPSVVDDTIA--VMPQNSYGTAKAISE 503
F++ S V+G D ++V + A ++P N Y KA +E
Sbjct: 127 FIHVSTDEVYGETDEDALVGNHEASQLLPTNPYSATKAGAE 167
>At5g44480.1 68418.m05450 NAD-dependent epimerase/dehydratase family
protein similar to SP|P55180 UDP-glucose 4-epimerase (EC
5.1.3.2) from Bacillus subtilis, GI:3021357
UDP-galactose 4-epimerase from Cyamopsis tetragonoloba;
contains Pfam profile PF01370 NAD dependent
epimerase/dehydratase family
Length = 436
Score = 43.6 bits (98), Expect = 8e-05
Identities = 40/157 (25%), Positives = 65/157 (41%), Gaps = 8/157 (5%)
Frame = +3
Query: 57 VVVTGAGGFLGSRVADFLLGSDSPLHVTELVLSGSRLPASR-------DDPRVRLLAVDL 215
V+VTG G++GS A LL + + + LS L A + R++ + DL
Sbjct: 97 VLVTGGAGYIGSHAALRLLRDSYRVTIVDN-LSRGNLGAVKTLQQLFPQTGRLQFIYADL 155
Query: 216 SKPGAGDQLIDANT-DVFFHMAAVVSGHAEAEFDYGFKVNFDATRELLETARKRAPNLKF 392
P A +++ N D H AAV + + N + + A R K
Sbjct: 156 GDPLAVEKIFSENAFDAVMHFAAVAYVGESTLYPLKYYHNITSNTLGVLEAMARHKVKKL 215
Query: 393 VYTSAVAVFGGDLPSVVDDTIAVMPQNSYGTAKAISE 503
+Y+S A +G + + +P N YG AK ++E
Sbjct: 216 IYSSTCATYGEPEKMPITEDTPQVPINPYGKAKKMAE 252
>At4g33360.1 68417.m04743 terpene cyclase/mutase-related low
similarity to squalene-hopene cyclase from Zymomonas
mobilis [SP|P33990]
Length = 344
Score = 43.2 bits (97), Expect = 1e-04
Identities = 42/136 (30%), Positives = 62/136 (45%), Gaps = 2/136 (1%)
Frame = +3
Query: 48 NMKVVVTGAGGFLGSRVADFLLGSDSPLHVTELVLSGSRLPASRDDPRVRLLAVDLSKPG 227
NMK++VTG+ G+LG+R+ LL V LV S L S P V L D++
Sbjct: 12 NMKILVTGSTGYLGARLCHVLLRRGH--SVRALVRRTSDL--SDLPPEVELAYGDVTDYR 67
Query: 228 AGDQLIDA--NTDVFFHMAAVVSGHAEAEFDYGFKVNFDATRELLETARKRAPNLKFVYT 401
+ L DA D+ FH AA+V + VN + +LE ++ K +YT
Sbjct: 68 S---LTDACSGCDIVFHAAALVEPWLPDPSRF-ISVNVGGLKNVLEAVKETKTVQKIIYT 123
Query: 402 SAVAVFGGDLPSVVDD 449
S+ G SV ++
Sbjct: 124 SSFFALGSTDGSVANE 139
>At1g53500.1 68414.m06066 NAD-dependent epimerase/dehydratase family
protein low similarity to dTDP-D-glucose-4,6-dehydratase
from Aneurinibacillus thermoaerophilus GI:16357461,
Sphingomonas sp. GI:1314581; contains Pfam profile
PF01370: NAD dependent epimerase/dehydratase family;
putative NDP-rhamnose synthase (rhm2 gene) GI:31559258
Length = 667
Score = 42.7 bits (96), Expect = 1e-04
Identities = 45/161 (27%), Positives = 71/161 (44%), Gaps = 12/161 (7%)
Frame = +3
Query: 57 VVVTGAGGFLGSRVADFLLGS--DSPLHVTELVLSGS---RLPASRDDPRVRLLAVDLSK 221
+++TGA GF+ S VA+ L+ + D + V + + S L S P + + D++
Sbjct: 11 ILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSDLKNLDPSFSSPNFKFVKGDIAS 70
Query: 222 PGAGDQ-LIDANTDVFFHMAAVVSGHAEAEFDYGF---KVNFDATRELLETARKRAPNLK 389
+ LI N D H AA H + F F K N T LLE + +
Sbjct: 71 DDLVNYLLITENIDTIMHFAA--QTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRR 128
Query: 390 FVYTSAVAVFG-GDLPSVVDDTIA--VMPQNSYGTAKAISE 503
F++ S V+G D + V + A ++P N Y KA +E
Sbjct: 129 FIHVSTDEVYGETDEDAAVGNHEASQLLPTNPYSATKAGAE 169
>At4g20460.1 68417.m02985 NAD-dependent epimerase/dehydratase family
protein similar to UDP-galactose 4-epimerase from
Cyamopsis tetragonoloba GI:3021357 [EMBL:AJ005082],
Bacillus subtilis SP|P55180; contains Pfam profile
PF01370 NAD dependent epimerase/dehydratase family
Length = 379
Score = 42.3 bits (95), Expect = 2e-04
Identities = 39/156 (25%), Positives = 65/156 (41%), Gaps = 7/156 (4%)
Frame = +3
Query: 57 VVVTGAGGFLGSRVADFLLGSDSPLHVTELVLSGSR-----LPASRDDP-RVRLLAVDLS 218
V+VTG G++GS A LL + + + + G+ L +P R++ + DL
Sbjct: 40 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNLGAVKVLQGLFPEPGRLQFIYADLG 99
Query: 219 KPGAGDQLIDANT-DVFFHMAAVVSGHAEAEFDYGFKVNFDATRELLETARKRAPNLKFV 395
A D++ N D H AAV + N + ++ A R K +
Sbjct: 100 DAKAVDKIFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLEAVARHKVKKLI 159
Query: 396 YTSAVAVFGGDLPSVVDDTIAVMPQNSYGTAKAISE 503
Y+S A +G + + +P N YG AK ++E
Sbjct: 160 YSSTCATYGEPDKMPIVEVTPQVPINPYGKAKKMAE 195
>At3g14790.1 68416.m01869 NAD-dependent epimerase/dehydratase family
protein similar to dTDP-glucose 4,6-dehydratase from
Aneurinibacillus thermoaerophilus GI:16357461,
Saccharopolyspora spinosa GI:15077647, RmlB from
Leptospira borgpetersenii GI:4234803; contains Pfam
profile PF01370 NAD dependent epimerase/dehydratase
family
Length = 664
Score = 42.3 bits (95), Expect = 2e-04
Identities = 45/161 (27%), Positives = 71/161 (44%), Gaps = 12/161 (7%)
Frame = +3
Query: 57 VVVTGAGGFLGSRVADFLLGS--DSPLHVTELVLSGSRLP---ASRDDPRVRLLAVDLSK 221
+++TGA GF+ S VA+ L+ S D + V + + S L S+ P + + D++
Sbjct: 9 ILITGAAGFIASHVANRLVRSYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIAS 68
Query: 222 PGAGDQ-LIDANTDVFFHMAAVVSGHAEAEFDYGF---KVNFDATRELLETARKRAPNLK 389
+ LI D H AA H + F F K N T LLE + +
Sbjct: 69 ADLVNYLLITEEIDTIMHFAA--QTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRR 126
Query: 390 FVYTSAVAVFG-GDLPSVVDDTIA--VMPQNSYGTAKAISE 503
F++ S V+G D + V + A ++P N Y KA +E
Sbjct: 127 FIHVSTDEVYGETDEDASVGNHEASQLLPTNPYSATKAGAE 167
>At4g27250.1 68417.m03912 dihydroflavonol 4-reductase family /
dihydrokaempferol 4-reductase family similar to
dihydrokaempferol 4-reductase, Ipomoea purpurea
(GI:4239849), Medicago sativa, PIR2:S61416
Length = 354
Score = 39.9 bits (89), Expect = 0.001
Identities = 37/127 (29%), Positives = 57/127 (44%), Gaps = 10/127 (7%)
Frame = +3
Query: 63 VTGAGGFLGSRVADFLLGSDSPLHVTELVLSGSRLPAS--RDDPRVRLLAVDLSKPGAGD 236
VTGA G++GS + LL +H T L+ S S +++ R+RL DL G+ D
Sbjct: 15 VTGASGYIGSWLVKSLLQRGYTVHATLRDLAKSEYFQSKWKENERLRLFRADLRDDGSFD 74
Query: 237 QLIDANTDVFFHMAA-----VVSGHAEAEFDYGFKV---NFDATRELLETARKRAPNLKF 392
+ D FH+AA + S H E KV R +L + K +
Sbjct: 75 DAV-KGCDGVFHVAASMEFDISSDHVNLESYVQSKVIEPALKGVRNVLSSCLKSKSVKRV 133
Query: 393 VYTSAVA 413
V+TS+++
Sbjct: 134 VFTSSIS 140
>At3g53520.2 68416.m05910 NAD-dependent epimerase/dehydratase family
protein similar to UDP-glucuronic acid decarboxylase
Uxs1p from Filobasidiella neoformans GI:14318327;
contains Pfam profile PF01370 NAD dependent
epimerase/dehydratase family
Length = 426
Score = 39.5 bits (88), Expect = 0.001
Identities = 35/129 (27%), Positives = 58/129 (44%), Gaps = 2/129 (1%)
Frame = +3
Query: 51 MKVVVTGAGGFLGSRVADFLLGSDSPLHVTELVLSGSR--LPASRDDPRVRLLAVDLSKP 224
+++VVTG GF+GS + D L+G + V + +G + L +PR L+ D+ +P
Sbjct: 120 LRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLFSNPRFELIRHDVVEP 179
Query: 225 GAGDQLIDANTDVFFHMAAVVSGHAEAEFDYGFKVNFDATRELLETARKRAPNLKFVYTS 404
I D +H+A S +K N T +L A++ +F+ TS
Sbjct: 180 ------ILLEVDQIYHLACPASPF--------YKTNVMGTLNMLGLAKR--VGARFLLTS 223
Query: 405 AVAVFGGDL 431
V+G L
Sbjct: 224 TSEVYGDPL 232
>At3g53520.1 68416.m05909 NAD-dependent epimerase/dehydratase family
protein similar to UDP-glucuronic acid decarboxylase
Uxs1p from Filobasidiella neoformans GI:14318327;
contains Pfam profile PF01370 NAD dependent
epimerase/dehydratase family
Length = 345
Score = 39.5 bits (88), Expect = 0.001
Identities = 35/129 (27%), Positives = 58/129 (44%), Gaps = 2/129 (1%)
Frame = +3
Query: 51 MKVVVTGAGGFLGSRVADFLLGSDSPLHVTELVLSGSR--LPASRDDPRVRLLAVDLSKP 224
+++VVTG GF+GS + D L+G + V + +G + L +PR L+ D+ +P
Sbjct: 120 LRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLFSNPRFELIRHDVVEP 179
Query: 225 GAGDQLIDANTDVFFHMAAVVSGHAEAEFDYGFKVNFDATRELLETARKRAPNLKFVYTS 404
I D +H+A S +K N T +L A++ +F+ TS
Sbjct: 180 ------ILLEVDQIYHLACPASPF--------YKTNVMGTLNMLGLAKR--VGARFLLTS 223
Query: 405 AVAVFGGDL 431
V+G L
Sbjct: 224 TSEVYGDPL 232
>At2g33590.1 68415.m04117 cinnamoyl-CoA reductase family similar to
cinnamoyl-CoA reductase from Pinus taeda [GI:17978649],
Eucalyptus gunnii [GI:2058311]
Length = 321
Score = 38.3 bits (85), Expect = 0.003
Identities = 19/29 (65%), Positives = 20/29 (68%)
Frame = +3
Query: 54 KVVVTGAGGFLGSRVADFLLGSDSPLHVT 140
KV VTGAGGFLGS V D LL D +H T
Sbjct: 8 KVCVTGAGGFLGSWVVDLLLSKDYFVHGT 36
>At3g62830.1 68416.m07059 NAD-dependent epimerase/dehydratase family
protein similar to UDP-glucuronic acid decarboxylase
Uxs1p from Filobasidiella neoformans GI:14318327;
contains Pfam profile PF01370 NAD dependent
epimerase/dehydratase family; contains non-consensus CA
donor splice site at exon 1 and TA acceptor splice site
at exon 2
Length = 445
Score = 37.1 bits (82), Expect = 0.007
Identities = 33/130 (25%), Positives = 56/130 (43%), Gaps = 3/130 (2%)
Frame = +3
Query: 51 MKVVVTGAGGFLGSRVADFLLGSDSPLHVTELVLSGSRLPASR--DDPRVRLLAVDLSKP 224
++VVVTG GF+GS + D L+ + V + +G + +P ++ D+ +P
Sbjct: 119 LRVVVTGGAGFVGSHLVDRLMARGDTVIVVDNFFTGRKENVMHHFSNPNFEMIRHDVVEP 178
Query: 225 GAGDQLIDANTDVFFHMAAVVSG-HAEAEFDYGFKVNFDATRELLETARKRAPNLKFVYT 401
I D +H+A S H + K N T +L A++ +F+ T
Sbjct: 179 ------ILLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKR--VGARFLLT 230
Query: 402 SAVAVFGGDL 431
S V+G L
Sbjct: 231 STSEVYGDPL 240
>At2g47650.1 68415.m05950 NAD-dependent epimerase/dehydratase family
protein similar to UDP-glucuronic acid decarboxylase
Uxs1p from Filobasidiella neoformans GI:14318327;
contains Pfam profile PF01370 NAD dependent
epimerase/dehydratase family; contains non-consensus AT
donor splice site at exon 1 and non-consensus AC
acceptor splice site at exon 2
Length = 443
Score = 37.1 bits (82), Expect = 0.007
Identities = 33/130 (25%), Positives = 57/130 (43%), Gaps = 3/130 (2%)
Frame = +3
Query: 51 MKVVVTGAGGFLGSRVADFLLGSDSPLHVTELVLSGSRLPASR--DDPRVRLLAVDLSKP 224
++VVVTG GF+GS + D L+ + V + +G + ++P ++ D+ +P
Sbjct: 121 LRVVVTGGAGFVGSHLVDRLMARGDNVIVVDNFFTGRKENVMHHFNNPNFEMIRHDVVEP 180
Query: 225 GAGDQLIDANTDVFFHMAAVVSG-HAEAEFDYGFKVNFDATRELLETARKRAPNLKFVYT 401
I D +H+A S H + K N T +L A++ +F+ T
Sbjct: 181 ------ILLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKR--VGARFLLT 232
Query: 402 SAVAVFGGDL 431
S V+G L
Sbjct: 233 STSEVYGDPL 242
>At2g28760.2 68415.m03498 NAD-dependent epimerase/dehydratase family
protein similar to UDP-glucuronic acid decarboxylase
Uxs1p from Filobasidiella neoformans GI:14318327;
contains Pfam profile PF01370 NAD dependent
epimerase/dehydratase family
Length = 343
Score = 36.7 bits (81), Expect = 0.009
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Frame = +3
Query: 45 ANMKVVVTGAGGFLGSRVADFLLGSD-SPLHVTELVLSGSR--LPASRDDPRVRLLAVDL 215
+NM+++VTG GF+GS + D L+ ++ + + V + +GS+ L PR L+ D+
Sbjct: 29 SNMRILVTGGAGFIGSHLVDKLMQNEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDV 88
Query: 216 SKPGAGDQLIDANTDVFFHMAAVVS 290
++P + D +H+A S
Sbjct: 89 TEP------LFVEVDQIYHLACPAS 107
>At2g28760.1 68415.m03497 NAD-dependent epimerase/dehydratase family
protein similar to UDP-glucuronic acid decarboxylase
Uxs1p from Filobasidiella neoformans GI:14318327;
contains Pfam profile PF01370 NAD dependent
epimerase/dehydratase family
Length = 343
Score = 36.7 bits (81), Expect = 0.009
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Frame = +3
Query: 45 ANMKVVVTGAGGFLGSRVADFLLGSD-SPLHVTELVLSGSR--LPASRDDPRVRLLAVDL 215
+NM+++VTG GF+GS + D L+ ++ + + V + +GS+ L PR L+ D+
Sbjct: 29 SNMRILVTGGAGFIGSHLVDKLMQNEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDV 88
Query: 216 SKPGAGDQLIDANTDVFFHMAAVVS 290
++P + D +H+A S
Sbjct: 89 TEP------LFVEVDQIYHLACPAS 107
>At2g33600.1 68415.m04118 cinnamoyl-CoA reductase family similar to
cinnamoyl-CoA reductase from Pinus taeda [GI:17978649],
Eucalyptus gunnii [GI:2058311]
Length = 321
Score = 35.5 bits (78), Expect = 0.020
Identities = 18/29 (62%), Positives = 20/29 (68%)
Frame = +3
Query: 54 KVVVTGAGGFLGSRVADFLLGSDSPLHVT 140
KV VTGAGGFLGS V + LL D +H T
Sbjct: 8 KVCVTGAGGFLGSWVVNHLLSRDYFVHGT 36
>At3g46440.1 68416.m05034 NAD-dependent epimerase/dehydratase family
protein similar to UDP-glucuronic acid decarboxylase
Uxs1p from Filobasidiella neoformans GI:14318327;
contains Pfam profile PF01370 NAD dependent
epimerase/dehydratase family
Length = 341
Score = 34.7 bits (76), Expect = 0.036
Identities = 24/85 (28%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
Frame = +3
Query: 45 ANMKVVVTGAGGFLGSRVADFLLGSD-SPLHVTELVLSGSR--LPASRDDPRVRLLAVDL 215
+NM+++++G GF+GS + D L+ ++ + + V + +GS+ L PR L+ D+
Sbjct: 27 SNMRILISGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDV 86
Query: 216 SKPGAGDQLIDANTDVFFHMAAVVS 290
++P LI+ D +H+A S
Sbjct: 87 TEP----LLIE--VDQIYHLACPAS 105
>At5g59290.1 68418.m07429 UDP-glucuronic acid decarboxylase (UXS3)
identical to UDP-glucuronic acid decarboxylase
[Arabidopsis thaliana] GI:14595666; contains Pfam
profile PF01370 NAD dependent epimerase/dehydratase
family; identical to cDNA UDP-glucuronic acid
decarboxylase (UXS3) GI:14595665
Length = 342
Score = 33.9 bits (74), Expect = 0.063
Identities = 18/62 (29%), Positives = 37/62 (59%), Gaps = 3/62 (4%)
Frame = +3
Query: 48 NMKVVVTGAGGFLGSRVADFLLGSD-SPLHVTELVLSGSR--LPASRDDPRVRLLAVDLS 218
NM+++++G GF+GS + D L+ ++ + + V + +GS+ L PR L+ D++
Sbjct: 29 NMRILISGGAGFIGSHLVDKLMENEKNEVVVADNYFTGSKENLKKWIGHPRFELIRHDVT 88
Query: 219 KP 224
+P
Sbjct: 89 EP 90
>At1g64440.1 68414.m07304 UDP-glucose 4-epimerase, putative /
UDP-galactose 4-epimerase, putative / Galactowaldenase,
putative similar to UDP-galactose 4-epimerase from
Arabidopsis thaliana SP|Q42605, Cyamopsis tetragonoloba
GI:3021357 [AJ005082] (Plant Sci. 142, 147-154 (1999))
Length = 348
Score = 32.7 bits (71), Expect = 0.14
Identities = 42/160 (26%), Positives = 68/160 (42%), Gaps = 11/160 (6%)
Frame = +3
Query: 57 VVVTGAGGFLGSR-VADFLLGSDSPLHVTEL----VLSGSRLPASRDDPRVRLLA--VDL 215
++VTG G++GS V LLG + + + L ++S R+ D L VDL
Sbjct: 5 ILVTGGAGYIGSHTVLQLLLGGYNTVVIDNLDNSSLVSIQRVKDLAGDHGQNLTVHQVDL 64
Query: 216 -SKPGAGDQLIDANTDVFFHMAAVVS-GHAEAEFDYGFKVNFDATRELLETARKRAPNLK 389
KP + D H A + + G + A+ + N AT LLE K
Sbjct: 65 RDKPALEKVFSETKFDAVMHFAGLKAVGESVAKPLLYYNNNLIATITLLEVMAAHGCK-K 123
Query: 390 FVYTSAVAVFG--GDLPSVVDDTIAVMPQNSYGTAKAISE 503
V++S+ V+G ++P + ++ M + YG K E
Sbjct: 124 LVFSSSATVYGWPKEVPCTEESPLSGM--SPYGRTKLFIE 161
>At1g76470.1 68414.m08895 cinnamoyl-CoA reductase family similar to
cinnamoyl-CoA reductase GB:CAA56103 [Eucalyptus gunnii],
Pinus taeda [GI:17978649]; contains non-consensus GG
acceptor splice site at exon 4
Length = 317
Score = 31.5 bits (68), Expect = 0.33
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = +3
Query: 54 KVVVTGAGGFLGSRVADFLLGSDSPLHVT 140
KV VTGAGGF+ S + FLL +H T
Sbjct: 6 KVCVTGAGGFIASWLVKFLLSRGYTVHGT 34
>At2g02400.1 68415.m00180 cinnamoyl-CoA reductase family similar to
cinnamoyl-CoA reductase from Pinus taeda [GI:17978649],
Eucalyptus gunnii [GI:2058311]
Length = 318
Score = 29.9 bits (64), Expect = 1.0
Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 7/87 (8%)
Frame = +3
Query: 42 LANMKVVVTGAGGFLGSRVADFLLGSD-SPLHVTELVLSGS------RLPASRDDPRVRL 200
+A V VTGA GF+GS + L+ + +H + + GS +LP S D ++++
Sbjct: 1 MAKETVCVTGANGFIGSWIIRTLIEKGYTKIHAS--IYPGSDPTHLLQLPGS--DSKIKI 56
Query: 201 LAVDLSKPGAGDQLIDANTDVFFHMAA 281
DL A + ID V FH+A+
Sbjct: 57 FEADLLDSDAISRAIDGCAGV-FHVAS 82
>At5g28840.1 68418.m03547 NAD-dependent epimerase/dehydratase family
protein similar to sugar epimerase BlmG from
Streptomyces verticillus GI:9937230; contains Pfam
profile PF01370 NAD dependent epimerase/dehydratase
family
Length = 377
Score = 29.5 bits (63), Expect = 1.3
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = +3
Query: 48 NMKVVVTGAGGFLGSRVA 101
N+K+ +TGAGGF+ S +A
Sbjct: 27 NLKISITGAGGFIASHIA 44
>At5g19440.1 68418.m02316 cinnamyl-alcohol dehydrogenase, putative
(CAD) similar to cinnamyl-alcohol dehydrogenase,
Eucalyptus gunnii [GI:1143445], apple tree, PIR:T16995
Length = 326
Score = 29.5 bits (63), Expect = 1.3
Identities = 35/139 (25%), Positives = 54/139 (38%), Gaps = 6/139 (4%)
Frame = +3
Query: 57 VVVTGAGGFLGSRVADFLLGSDSPLHVTELVLSGSR-----LPASRDDPRVRLLAVDLSK 221
V VTGA G++ S + FLL + + S + + R+ L DL +
Sbjct: 10 VCVTGASGYIASWLVKFLLSRGYTVKASVRDPSDPKKTQHLVSLEGAKERLHLFKADLLE 69
Query: 222 PGAGDQLIDANTDVFFHMAAVVSGHAEAEFDYGFKVNFDATRELLETARKRAPNLKFVYT 401
G+ D ID V FH A+ A+ T +L + K + + V T
Sbjct: 70 QGSFDSAIDGCHGV-FHTASPFFNDAKDPQAELIDPAVKGTLNVLNSCAKASSVKRVVVT 128
Query: 402 SAVAVFG-GDLPSVVDDTI 455
S++A G P D T+
Sbjct: 129 SSMAAVGYNGKPRTPDVTV 147
>At3g04550.1 68416.m00483 expressed protein
Length = 449
Score = 29.5 bits (63), Expect = 1.3
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = -1
Query: 148 TSSVTCNGESDPKRKSATREPKNPPA 71
T S T PKR SA PKNPPA
Sbjct: 35 TVSFTVTASMIPKRSSANMIPKNPPA 60
>At1g10000.1 68414.m01128 expressed protein
Length = 303
Score = 29.1 bits (62), Expect = 1.8
Identities = 15/29 (51%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +1
Query: 289 VATPRPNLTTGL-KSILTLHENSWRQQES 372
VATPRPN TT L L + +W+QQ S
Sbjct: 145 VATPRPNSTTTLTHDFLCYVDAAWQQQSS 173
>At4g23920.1 68417.m03440 UDP-glucose 4-epimerase, putative /
UDP-galactose 4-epimerase, putative / Galactowaldenase,
putative similar to UDP-galactose 4-epimerase from
Arabidopsis thaliana SP|Q42605, Cyamopsis tetragonoloba
GI:3021357 [AJ005082]
Length = 350
Score = 28.7 bits (61), Expect = 2.4
Identities = 42/160 (26%), Positives = 61/160 (38%), Gaps = 11/160 (6%)
Frame = +3
Query: 57 VVVTGAGGFLGSR-VADFLLGSDSPLHV------TELVLSGSRLPASRDDPRVRLLAVDL 215
V+VTG G++GS V L G S + V + L + A + R+ VDL
Sbjct: 5 VLVTGGAGYIGSHTVLQLLEGGYSAVVVDNYDNSSAASLQRVKKLAGENGNRLSFHQVDL 64
Query: 216 -SKPGAGDQLIDANTDVFFHMAAV--VSGHAEAEFDYGFKVNFDATRELLET-ARKRAPN 383
+P + D H A + V E Y + N T LLE A+ N
Sbjct: 65 RDRPALEKIFSETKFDAVIHFAGLKAVGESVEKPLLY-YNNNIVGTVTLLEVMAQYGCKN 123
Query: 384 LKFVYTSAVAVFGGDLPSVVDDTIAVMPQNSYGTAKAISE 503
L V++S+ V+G + + N YG K E
Sbjct: 124 L--VFSSSATVYGWPKEVPCTEESPISATNPYGRTKLFIE 161
>At5g42800.1 68418.m05213 dihydroflavonol 4-reductase
(dihydrokaempferol 4-reductase) (DFR) nearly identical
to GI:166686
Length = 382
Score = 28.3 bits (60), Expect = 3.1
Identities = 31/122 (25%), Positives = 52/122 (42%), Gaps = 5/122 (4%)
Frame = +3
Query: 57 VVVTGAGGFLGSRVADFLLGSDSPLHVTELVLSG-SRLPASRDDPRVRLL----AVDLSK 221
V VTGA GF+GS + LL + T ++ D P + L DLS+
Sbjct: 8 VCVTGASGFIGSWLVMRLLERGYFVRATVRDPGNLKKVQHLLDLPNAKTLLTLWKADLSE 67
Query: 222 PGAGDQLIDANTDVFFHMAAVVSGHAEAEFDYGFKVNFDATRELLETARKRAPNLKFVYT 401
G+ D I+ D FH+A + ++ + K + +++ K +FV+T
Sbjct: 68 EGSYDDAIN-GCDGVFHVATPMDFESKDPENEVIKPTVNGMLGIMKACVKAKTVRRFVFT 126
Query: 402 SA 407
S+
Sbjct: 127 SS 128
>At5g04370.1 68418.m00429 S-adenosyl-L-methionine:carboxyl
methyltransferase family protein similar to
SAM:salicylic acid carboxyl methyltransferase (SAMT)
[GI:6002712][Clarkia breweri] and to SAM:benzoic acid
carboxyl methyltransferase
(BAMT)[GI:9789277][Antirrhinum majus]
Length = 396
Score = 27.9 bits (59), Expect = 4.1
Identities = 10/22 (45%), Positives = 17/22 (77%)
Frame = -1
Query: 154 DSTSSVTCNGESDPKRKSATRE 89
DST+++ CNG+S+ +RK+ E
Sbjct: 7 DSTTTLRCNGKSENERKNGDEE 28
>At5g38350.1 68418.m04628 disease resistance protein (NBS-LRR
class), putative domain signature NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 833
Score = 27.5 bits (58), Expect = 5.4
Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = +3
Query: 234 DQLIDANTDVFFHMAAVVSGHAEAEFDYGFKVNF-DATRELLETARKRAPNLKFVYTSAV 410
D L + + D+F H+A + + E + ++F D + A K NLKF+ T+
Sbjct: 267 DALCEEDKDLFLHIACLFNNQEMVEVEDYLALSFLDVRQGFHLLAEKSLINLKFLSTNCT 326
Query: 411 AV 416
+
Sbjct: 327 RI 328
>At1g04810.1 68414.m00477 26S proteasome regulatory subunit,
putative contains similarity to 26S proteasome
regulatory subunit S1 SP:O88761, GI:3288594 from [Rattus
norvegicus]
Length = 1001
Score = 27.5 bits (58), Expect = 5.4
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -2
Query: 153 IALARLHATGNLIPKENQPHASLKTHRHRSLQLSYLL 43
+A A + + G L+ N+PH SLK H LSYL+
Sbjct: 1 MAAAMVSSAGGLLAMLNEPHPSLKLH-----ALSYLI 32
>At1g04120.1 68414.m00401 ABC transporter family protein Strong
similarity to MRP-like ABC transporter gb|U92650 from A.
thaliana and canalicular multi-drug resistance protein
gb|L49379 from Rattus norvegicus
Length = 1514
Score = 27.5 bits (58), Expect = 5.4
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -2
Query: 105 NQPHASLKTHRHRSLQLSYLLVGLKKKTVNFRTHR 1
+ P ++L H L Y+L L +KTV F TH+
Sbjct: 771 DDPFSALDAHTGSDLFRDYILSALAEKTVVFVTHQ 805
>At2g34450.1 68415.m04227 high mobility group (HMG1/2) family
protein similar to HMG protein [Arabidopsis thaliana]
GI:2832361; contains Pfam profile PF00505: HMG (high
mobility group) box
Length = 151
Score = 27.1 bits (57), Expect = 7.2
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = -1
Query: 124 ESDPKRKSATREPKNPPAPVTTTFIFASRFEKK 26
++ PK+K + K P P T F F F K+
Sbjct: 48 KTSPKKKPVKLQTKMPKKPATAFFFFLDDFRKQ 80
>At1g80750.1 68414.m09474 60S ribosomal protein L7 (RPL7A) similar
to ribosomal protein L7 GB:AAA03081 GI:307388 from [Homo
sapiens]
Length = 247
Score = 27.1 bits (57), Expect = 7.2
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = -1
Query: 112 KRKSATREPKNPPAPVTTTFIFASRFEKKN 23
+ K + PK+ P PV + +F R + KN
Sbjct: 68 RMKQRVKRPKSSPPPVKSDLVFIIRIQGKN 97
>At5g14570.1 68418.m01708 transporter, putative similar to
trans-membrane nitrate transporter protein AtNRT2:1
[Arabidopsis thaliana] GI:3747058, high-affinity nitrate
transporter ACH1 [Arabidopsis thaliana] GI:3608362;
contains Pfam profile PF00083: Sugar (and other)
transporter
Length = 493
Score = 26.6 bits (56), Expect = 9.5
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 27 FFSNRLANMKVVVTGAGGFLGSRVADFLLGS 119
F S R + +TG+GG +G+ V FLL S
Sbjct: 391 FVSTRSLGVVAGITGSGGTVGAVVTQFLLFS 421
>At2g21280.1 68415.m02533 expressed protein similar to YfhF
(GI:2804536) [Bacillus subtilis]
Length = 347
Score = 26.6 bits (56), Expect = 9.5
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +3
Query: 33 SNRLANMKVVVTGAGGFLGSRVADFLLGSDSPLHV 137
S + + M V VTGA GF+G R+ L + + V
Sbjct: 40 SQKESQMTVSVTGATGFIGRRLVQRLRADNHAIRV 74
>At1g77720.1 68414.m09049 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 777
Score = 26.6 bits (56), Expect = 9.5
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +3
Query: 153 SGSRLPASRDDPRVRLLAVDLSK 221
+ S +PAS +DP VR+ D SK
Sbjct: 303 TASEMPASTNDPEVRVKETDTSK 325
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,537,745
Number of Sequences: 28952
Number of extensions: 208776
Number of successful extensions: 670
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 652
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 666
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 898188928
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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