Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_C01
(298 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L16510-1|AAC37547.1| 339|Homo sapiens cathepsin B protein. 44 1e-04
BC095408-1|AAH95408.1| 339|Homo sapiens cathepsin B protein. 44 1e-04
M14221-1|AAA52129.1| 339|Homo sapiens CTSB protein. 42 3e-04
BC010240-1|AAH10240.1| 339|Homo sapiens cathepsin B protein. 42 3e-04
M21551-1|AAA59934.1| 121|Homo sapiens neuromedin B protein. 29 2.7
BC008603-1|AAH08603.1| 121|Homo sapiens neuromedin B protein. 29 2.7
BC007431-1|AAH07431.1| 154|Homo sapiens neuromedin B protein. 29 2.7
BC007407-1|AAH07407.1| 154|Homo sapiens neuromedin B protein. 29 2.7
AL390071-2|CAI17182.1| 2943|Homo sapiens neurobeachin protein. 28 6.2
AL357083-2|CAI15737.1| 2943|Homo sapiens neurobeachin protein. 28 6.2
AL356430-2|CAH74071.1| 2943|Homo sapiens neurobeachin protein. 28 6.2
AL161902-1|CAI16334.1| 2943|Homo sapiens neurobeachin protein. 28 6.2
AL161718-1|CAH72182.1| 2943|Homo sapiens neurobeachin protein. 28 6.2
AL139083-1|CAH71882.1| 2943|Homo sapiens neurobeachin protein. 28 6.2
AL138690-1|CAH72296.1| 2943|Homo sapiens neurobeachin protein. 28 6.2
AK001059-1|BAA91485.1| 334|Homo sapiens protein ( Homo sapiens ... 28 6.2
AF467288-1|AAM53531.1| 2946|Homo sapiens BCL8B protein protein. 28 6.2
AK025511-1|BAB15157.1| 132|Homo sapiens protein ( Homo sapiens ... 27 8.2
>L16510-1|AAC37547.1| 339|Homo sapiens cathepsin B protein.
Length = 339
Score = 43.6 bits (98), Expect = 1e-04
Identities = 20/44 (45%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Frame = +2
Query: 122 LYVALACILAVV-ASDLP--HPLSDAFXNLINKKQNTWKAGRNF 244
L+ +L C+L + A P HPLSD N +NK+ TW+AG NF
Sbjct: 4 LWASLCCLLVLANARSRPSFHPLSDELVNYVNKRNTTWQAGHNF 47
>BC095408-1|AAH95408.1| 339|Homo sapiens cathepsin B protein.
Length = 339
Score = 43.6 bits (98), Expect = 1e-04
Identities = 20/44 (45%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Frame = +2
Query: 122 LYVALACILAVV-ASDLP--HPLSDAFXNLINKKQNTWKAGRNF 244
L+ +L C+L + A P HPLSD N +NK+ TW+AG NF
Sbjct: 4 LWASLCCLLVLANARSRPSFHPLSDELVNYVNKRNTTWQAGHNF 47
>M14221-1|AAA52129.1| 339|Homo sapiens CTSB protein.
Length = 339
Score = 42.3 bits (95), Expect = 3e-04
Identities = 19/44 (43%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Frame = +2
Query: 122 LYVALACILAVV-ASDLP--HPLSDAFXNLINKKQNTWKAGRNF 244
L+ +L C+L + A P HP+SD N +NK+ TW+AG NF
Sbjct: 4 LWASLCCLLVLANARSRPSFHPVSDELVNYVNKRNTTWQAGHNF 47
>BC010240-1|AAH10240.1| 339|Homo sapiens cathepsin B protein.
Length = 339
Score = 42.3 bits (95), Expect = 3e-04
Identities = 19/44 (43%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Frame = +2
Query: 122 LYVALACILAVV-ASDLP--HPLSDAFXNLINKKQNTWKAGRNF 244
L+ +L C+L + A P HP+SD N +NK+ TW+AG NF
Sbjct: 4 LWASLCCLLVLANARSRPSFHPVSDELVNYVNKRNTTWQAGHNF 47
>M21551-1|AAA59934.1| 121|Homo sapiens neuromedin B protein.
Length = 121
Score = 29.1 bits (62), Expect = 2.7
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +2
Query: 101 KMAPSCALYVALACILAVVASDLPHPLSDAFXNLINKKQNTWKAG 235
+M S L+ LA +A ++ DLP P S A ++ + N W G
Sbjct: 9 RMFGSLLLFALLAAGVAPLSWDLPEPRSRASKIRVHSRGNLWATG 53
>BC008603-1|AAH08603.1| 121|Homo sapiens neuromedin B protein.
Length = 121
Score = 29.1 bits (62), Expect = 2.7
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +2
Query: 101 KMAPSCALYVALACILAVVASDLPHPLSDAFXNLINKKQNTWKAG 235
+M S L+ LA +A ++ DLP P S A ++ + N W G
Sbjct: 9 RMFGSLLLFALLAAGVAPLSWDLPEPRSRASKIRVHSRGNLWATG 53
>BC007431-1|AAH07431.1| 154|Homo sapiens neuromedin B protein.
Length = 154
Score = 29.1 bits (62), Expect = 2.7
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +2
Query: 101 KMAPSCALYVALACILAVVASDLPHPLSDAFXNLINKKQNTWKAG 235
+M S L+ LA +A ++ DLP P S A ++ + N W G
Sbjct: 9 RMFGSLLLFALLAAGVAPLSWDLPEPRSRASKIRVHSRGNLWATG 53
>BC007407-1|AAH07407.1| 154|Homo sapiens neuromedin B protein.
Length = 154
Score = 29.1 bits (62), Expect = 2.7
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +2
Query: 101 KMAPSCALYVALACILAVVASDLPHPLSDAFXNLINKKQNTWKAG 235
+M S L+ LA +A ++ DLP P S A ++ + N W G
Sbjct: 9 RMFGSLLLFALLAAGVAPLSWDLPEPRSRASKIRVHSRGNLWATG 53
>AL390071-2|CAI17182.1| 2943|Homo sapiens neurobeachin protein.
Length = 2943
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = -2
Query: 228 FHVFCFLLIKXINASESGWGKSLATTARIHASATYRAHE 112
+++F LL I GW + T + H+ TY AH+
Sbjct: 917 YNIFRILLYHAIKYEWGGWRVWVDTLSIAHSKVTYEAHK 955
>AL357083-2|CAI15737.1| 2943|Homo sapiens neurobeachin protein.
Length = 2943
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = -2
Query: 228 FHVFCFLLIKXINASESGWGKSLATTARIHASATYRAHE 112
+++F LL I GW + T + H+ TY AH+
Sbjct: 917 YNIFRILLYHAIKYEWGGWRVWVDTLSIAHSKVTYEAHK 955
>AL356430-2|CAH74071.1| 2943|Homo sapiens neurobeachin protein.
Length = 2943
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = -2
Query: 228 FHVFCFLLIKXINASESGWGKSLATTARIHASATYRAHE 112
+++F LL I GW + T + H+ TY AH+
Sbjct: 917 YNIFRILLYHAIKYEWGGWRVWVDTLSIAHSKVTYEAHK 955
>AL161902-1|CAI16334.1| 2943|Homo sapiens neurobeachin protein.
Length = 2943
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = -2
Query: 228 FHVFCFLLIKXINASESGWGKSLATTARIHASATYRAHE 112
+++F LL I GW + T + H+ TY AH+
Sbjct: 917 YNIFRILLYHAIKYEWGGWRVWVDTLSIAHSKVTYEAHK 955
>AL161718-1|CAH72182.1| 2943|Homo sapiens neurobeachin protein.
Length = 2943
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = -2
Query: 228 FHVFCFLLIKXINASESGWGKSLATTARIHASATYRAHE 112
+++F LL I GW + T + H+ TY AH+
Sbjct: 917 YNIFRILLYHAIKYEWGGWRVWVDTLSIAHSKVTYEAHK 955
>AL139083-1|CAH71882.1| 2943|Homo sapiens neurobeachin protein.
Length = 2943
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = -2
Query: 228 FHVFCFLLIKXINASESGWGKSLATTARIHASATYRAHE 112
+++F LL I GW + T + H+ TY AH+
Sbjct: 917 YNIFRILLYHAIKYEWGGWRVWVDTLSIAHSKVTYEAHK 955
>AL138690-1|CAH72296.1| 2943|Homo sapiens neurobeachin protein.
Length = 2943
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = -2
Query: 228 FHVFCFLLIKXINASESGWGKSLATTARIHASATYRAHE 112
+++F LL I GW + T + H+ TY AH+
Sbjct: 917 YNIFRILLYHAIKYEWGGWRVWVDTLSIAHSKVTYEAHK 955
>AK001059-1|BAA91485.1| 334|Homo sapiens protein ( Homo sapiens
cDNA FLJ10197 fis, clone HEMBA1004795, moderately
similar to CDC4-LIKE PROTEIN. ).
Length = 334
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = -2
Query: 228 FHVFCFLLIKXINASESGWGKSLATTARIHASATYRAHE 112
+++F LL I GW + T + H+ TY AH+
Sbjct: 133 YNIFRILLYHAIKYEWGGWRVWVDTLSIAHSKVTYEAHK 171
>AF467288-1|AAM53531.1| 2946|Homo sapiens BCL8B protein protein.
Length = 2946
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = -2
Query: 228 FHVFCFLLIKXINASESGWGKSLATTARIHASATYRAHE 112
+++F LL I GW + T + H+ TY AH+
Sbjct: 917 YNIFRILLYHAIKYEWGGWRVWVDTLSIAHSKVTYEAHK 955
>AK025511-1|BAB15157.1| 132|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21858 fis, clone HEP02301. ).
Length = 132
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/20 (60%), Positives = 12/20 (60%), Gaps = 1/20 (5%)
Frame = +1
Query: 217 KHMESWPELPDAYT-VCTHH 273
KHM ELP YT CTHH
Sbjct: 104 KHMSPTRELPHMYTCTCTHH 123
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,147,670
Number of Sequences: 237096
Number of extensions: 720854
Number of successful extensions: 1773
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1738
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1773
length of database: 76,859,062
effective HSP length: 75
effective length of database: 59,076,862
effective search space used: 1358767826
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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