Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_C01
(298 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U46669-3|AAA85744.2| 737|Caenorhabditis elegans Regulator of g ... 28 1.4
Z81482-5|CAB03956.3| 409|Caenorhabditis elegans Hypothetical pr... 27 3.2
U72211-1|AAB97099.1| 409|Caenorhabditis elegans putative transc... 27 3.2
DQ338465-1|ABC67522.1| 690|Caenorhabditis elegans KEL-8 protein. 26 4.2
AF067946-5|AAC17684.4| 690|Caenorhabditis elegans Hypothetical ... 26 4.2
Z68760-2|CAA92995.1| 597|Caenorhabditis elegans Hypothetical pr... 26 5.6
Z68012-1|CAA92016.1| 304|Caenorhabditis elegans Hypothetical pr... 26 5.6
Z46241-8|CAA86316.2| 1784|Caenorhabditis elegans Hypothetical pr... 26 5.6
AF016680-1|AAB66163.2| 458|Caenorhabditis elegans Synaptotagmin... 26 5.6
Z81133-4|CAI70414.2| 184|Caenorhabditis elegans Hypothetical pr... 25 7.4
U42838-1|AAB52492.2| 398|Caenorhabditis elegans Hypothetical pr... 25 7.4
AF078786-3|AAC26943.2| 384|Caenorhabditis elegans Hypothetical ... 25 7.4
Z66500-11|CAC42334.1| 625|Caenorhabditis elegans Hypothetical p... 25 9.7
Z66500-10|CAB61022.1| 666|Caenorhabditis elegans Hypothetical p... 25 9.7
Z66500-9|CAA91307.1| 672|Caenorhabditis elegans Hypothetical pr... 25 9.7
Z54237-1|CAA90987.2| 445|Caenorhabditis elegans Hypothetical pr... 25 9.7
AL132904-3|CAB60972.1| 718|Caenorhabditis elegans Hypothetical ... 25 9.7
AF070920-1|AAC24231.1| 554|Caenorhabditis elegans cytoplasmic s... 25 9.7
AF063244-1|AAC16434.1| 666|Caenorhabditis elegans cytoplasmic s... 25 9.7
AF039041-1|AAP46271.1| 1067|Caenorhabditis elegans Laminin relat... 25 9.7
AC024805-13|AAK39335.1| 246|Caenorhabditis elegans Hypothetical... 25 9.7
>U46669-3|AAA85744.2| 737|Caenorhabditis elegans Regulator of g
protein signalingprotein 6 protein.
Length = 737
Score = 27.9 bits (59), Expect = 1.4
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Frame = -3
Query: 296 LSRLPXIL*CVQTVYASGSSGQLSMCFVSY*S--NX*THLRADGASHWPQQREYTRARRT 123
LS+LP + Q + +G +S C + S N HL+ DG + QQ+EYT +
Sbjct: 426 LSQLPSTI-YEQNNFPFHQNGDISYCEIPNESERNKHAHLQHDGPNAAHQQKEYTLSIFN 484
Query: 122 EHTKEPSFSI 93
+ ++ S ++
Sbjct: 485 KFVRKASHAV 494
>Z81482-5|CAB03956.3| 409|Caenorhabditis elegans Hypothetical
protein C40H5.5 protein.
Length = 409
Score = 26.6 bits (56), Expect = 3.2
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +1
Query: 97 LKDGSFVCSVRRARVYSRCC 156
++DG F+C A+ Y +CC
Sbjct: 152 VRDGVFLCRADHAKRYQKCC 171
>U72211-1|AAB97099.1| 409|Caenorhabditis elegans putative
transcription factor TTX-3 protein.
Length = 409
Score = 26.6 bits (56), Expect = 3.2
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +1
Query: 97 LKDGSFVCSVRRARVYSRCC 156
++DG F+C A+ Y +CC
Sbjct: 152 VRDGVFLCRADHAKRYQKCC 171
>DQ338465-1|ABC67522.1| 690|Caenorhabditis elegans KEL-8 protein.
Length = 690
Score = 26.2 bits (55), Expect = 4.2
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 5/47 (10%)
Frame = -1
Query: 151 SENTRERD---VQ--STRRSHLSVFYFLLQSRSVNKLTRNSNECSAI 26
S N R+R VQ T R HL + FL ++ + N +NS EC I
Sbjct: 283 SSNPRDRQHHFVQLFKTLRLHLVGWNFLCEAVNSNSYVKNSQECREI 329
>AF067946-5|AAC17684.4| 690|Caenorhabditis elegans Hypothetical
protein W02G9.2 protein.
Length = 690
Score = 26.2 bits (55), Expect = 4.2
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 5/47 (10%)
Frame = -1
Query: 151 SENTRERD---VQ--STRRSHLSVFYFLLQSRSVNKLTRNSNECSAI 26
S N R+R VQ T R HL + FL ++ + N +NS EC I
Sbjct: 283 SSNPRDRQHHFVQLFKTLRLHLVGWNFLCEAVNSNSYVKNSQECREI 329
>Z68760-2|CAA92995.1| 597|Caenorhabditis elegans Hypothetical
protein F36H1.3 protein.
Length = 597
Score = 25.8 bits (54), Expect = 5.6
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = +2
Query: 158 ASDLPHPLSDAFXNLINKKQNTWKAGRNFPTHTPFA 265
AS LP P+S L+ K A + F PFA
Sbjct: 531 ASPLPSPVSSPAPQLVQKPTTPTDASKPFVAQPPFA 566
>Z68012-1|CAA92016.1| 304|Caenorhabditis elegans Hypothetical
protein T24D5.1 protein.
Length = 304
Score = 25.8 bits (54), Expect = 5.6
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = -1
Query: 145 NTRERDVQSTRRSHLSVFYFLLQSRSVNKLTRNSNECSAITEQ 17
+T+ R+ Q R S +YF+ Q+ +++K RN N A E+
Sbjct: 41 STKYRNGQKARGS----YYFIFQNLAISKTKRNQNNDGADREK 79
>Z46241-8|CAA86316.2| 1784|Caenorhabditis elegans Hypothetical protein
C38D4.3 protein.
Length = 1784
Score = 25.8 bits (54), Expect = 5.6
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = -1
Query: 151 SENTRERDVQSTRRSHLSVFYFLLQSRSVNKLTRNSN 41
S NTR Q T ++ SV + SRS ++ TR+++
Sbjct: 1445 SRNTRSASAQKTVAANKSVLESEIPSRSASRRTRSTS 1481
>AF016680-1|AAB66163.2| 458|Caenorhabditis elegans Synaptotagmin
protein 5 protein.
Length = 458
Score = 25.8 bits (54), Expect = 5.6
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = -3
Query: 158 PQQREYTRARRTEHTKEPSFSILFSFTES 72
P++R + + R + T +P F+ +FSF S
Sbjct: 214 PERRGHCKTRICKKTNDPEFNEMFSFDVS 242
>Z81133-4|CAI70414.2| 184|Caenorhabditis elegans Hypothetical
protein T28B8.6 protein.
Length = 184
Score = 25.4 bits (53), Expect = 7.4
Identities = 9/26 (34%), Positives = 11/26 (42%)
Frame = -2
Query: 228 FHVFCFLLIKXINASESGWGKSLATT 151
FH+FC + I S W K T
Sbjct: 7 FHLFCLIFITFAERSTDAWTKEFEVT 32
>U42838-1|AAB52492.2| 398|Caenorhabditis elegans Hypothetical
protein T08G2.2 protein.
Length = 398
Score = 25.4 bits (53), Expect = 7.4
Identities = 13/51 (25%), Positives = 24/51 (47%)
Frame = -2
Query: 294 FKAPXNIVMCANGVCVGKFRPAFHVFCFLLIKXINASESGWGKSLATTARI 142
F N+ +C NG+ ++RP +V C + + E G++ AR+
Sbjct: 328 FPKNLNVSLCGNGLEGWEYRPFKNVTCESIRITLANFEKSSGRNFPKEARV 378
>AF078786-3|AAC26943.2| 384|Caenorhabditis elegans Hypothetical
protein M01G5.3 protein.
Length = 384
Score = 25.4 bits (53), Expect = 7.4
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = -2
Query: 297 SFKAPXNIVMCANGVCVGKFRPAFHVFCFLL 205
S P ++ +G+C +FRP F +F F +
Sbjct: 204 SCAVPGIVLTWKDGLCYQEFRPYFLIFTFYI 234
>Z66500-11|CAC42334.1| 625|Caenorhabditis elegans Hypothetical
protein T05C12.6c protein.
Length = 625
Score = 25.0 bits (52), Expect = 9.7
Identities = 13/48 (27%), Positives = 24/48 (50%)
Frame = -1
Query: 199 IXKRI*ERMGQVTGHNSENTRERDVQSTRRSHLSVFYFLLQSRSVNKL 56
+ +R E + ++ NSE+ + D + R S Y L +R +NK+
Sbjct: 138 VSRRAGEHLAELYTSNSEDPYQYDEHTRRTGDDSSLYEPLAARDMNKI 185
>Z66500-10|CAB61022.1| 666|Caenorhabditis elegans Hypothetical
protein T05C12.6b protein.
Length = 666
Score = 25.0 bits (52), Expect = 9.7
Identities = 13/48 (27%), Positives = 24/48 (50%)
Frame = -1
Query: 199 IXKRI*ERMGQVTGHNSENTRERDVQSTRRSHLSVFYFLLQSRSVNKL 56
+ +R E + ++ NSE+ + D + R S Y L +R +NK+
Sbjct: 138 VSRRAGEHLAELYTSNSEDPYQYDEHTRRTGDDSSLYEPLAARDMNKI 185
>Z66500-9|CAA91307.1| 672|Caenorhabditis elegans Hypothetical
protein T05C12.6a protein.
Length = 672
Score = 25.0 bits (52), Expect = 9.7
Identities = 13/48 (27%), Positives = 24/48 (50%)
Frame = -1
Query: 199 IXKRI*ERMGQVTGHNSENTRERDVQSTRRSHLSVFYFLLQSRSVNKL 56
+ +R E + ++ NSE+ + D + R S Y L +R +NK+
Sbjct: 138 VSRRAGEHLAELYTSNSEDPYQYDEHTRRTGDDSSLYEPLAARDMNKI 185
>Z54237-1|CAA90987.2| 445|Caenorhabditis elegans Hypothetical
protein T11B7.1 protein.
Length = 445
Score = 25.0 bits (52), Expect = 9.7
Identities = 12/47 (25%), Positives = 23/47 (48%)
Frame = +3
Query: 18 CSVIALHSFELRVNLLTDRLCKRK*NTERWLLRVLCTSRSRVFSLLW 158
C ++ LH E R+ L + + +K +W R + + R+ +L W
Sbjct: 300 CKMLQLHKEECRLILESLEVHDKKDQEIQWFQRQINDQKKRIANLGW 346
>AL132904-3|CAB60972.1| 718|Caenorhabditis elegans Hypothetical
protein Y111B2A.3 protein.
Length = 718
Score = 25.0 bits (52), Expect = 9.7
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = -2
Query: 180 SGWGKSLATTARIHASATYRAHEGAIFQYF 91
S W KSL R SA Y+A GAI + F
Sbjct: 380 STWFKSLEVEKRRIPSAIYKAVNGAIEETF 409
>AF070920-1|AAC24231.1| 554|Caenorhabditis elegans cytoplasmic
signalling transducer protein.
Length = 554
Score = 25.0 bits (52), Expect = 9.7
Identities = 13/48 (27%), Positives = 24/48 (50%)
Frame = -1
Query: 199 IXKRI*ERMGQVTGHNSENTRERDVQSTRRSHLSVFYFLLQSRSVNKL 56
+ +R E + ++ NSE+ + D + R S Y L +R +NK+
Sbjct: 67 VSRRAGEHLAELYTSNSEDPYQYDEHTRRTGDDSSLYEPLAARDMNKI 114
>AF063244-1|AAC16434.1| 666|Caenorhabditis elegans cytoplasmic
signalling transducer protein.
Length = 666
Score = 25.0 bits (52), Expect = 9.7
Identities = 13/48 (27%), Positives = 24/48 (50%)
Frame = -1
Query: 199 IXKRI*ERMGQVTGHNSENTRERDVQSTRRSHLSVFYFLLQSRSVNKL 56
+ +R E + ++ NSE+ + D + R S Y L +R +NK+
Sbjct: 138 VSRRAGEHLAELYTSNSEDPYQYDEHTRRTGDDSSLYEPLAARDMNKI 185
>AF039041-1|AAP46271.1| 1067|Caenorhabditis elegans Laminin related.
see also lmb-protein 1 protein.
Length = 1067
Score = 25.0 bits (52), Expect = 9.7
Identities = 14/44 (31%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Frame = -3
Query: 245 GSSGQLSMCFVSY*SNX*THLRADGASHWPQQRE-YTRARRTEH 117
GS G+ C VS+ D + W QRE Y + R E+
Sbjct: 59 GSQGRQRFCIVSHLEEQTKCFYCDSRTEWKPQREPYRLSHRIEN 102
>AC024805-13|AAK39335.1| 246|Caenorhabditis elegans Hypothetical
protein Y51H7C.2 protein.
Length = 246
Score = 25.0 bits (52), Expect = 9.7
Identities = 9/30 (30%), Positives = 17/30 (56%)
Frame = -2
Query: 192 NASESGWGKSLATTARIHASATYRAHEGAI 103
N + W ++AT A+ HA+ + H+G +
Sbjct: 55 NIMKMKWNVTIATAAQNHANKCPKGHDGPL 84
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,488,140
Number of Sequences: 27780
Number of extensions: 114908
Number of successful extensions: 348
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 346
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 348
length of database: 12,740,198
effective HSP length: 70
effective length of database: 10,795,598
effective search space used: 302276744
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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