Samia BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_C01
         (298 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g43990.2 68418.m05382 SET domain-containing protein identical...    27   3.0  
At5g43990.1 68418.m05383 SET domain-containing protein identical...    27   3.0  
At3g51360.1 68416.m05624 aspartyl protease family protein contai...    26   3.9  
At5g01550.1 68418.m00070 lectin protein kinase, putative similar...    26   5.2  
At4g29720.1 68417.m04232 amine oxidase family protein similar to...    26   5.2  
At5g05240.1 68418.m00560 expressed protein similar to unknown pr...    25   6.9  
At4g23150.1 68417.m03341 protein kinase family protein contains ...    25   6.9  
At3g48760.1 68416.m05325 zinc finger (DHHC type) family protein ...    25   6.9  
At5g06570.2 68418.m00742 expressed protein similar to PrMC3 [Pin...    25   9.1  
At5g06570.1 68418.m00741 expressed protein similar to PrMC3 [Pin...    25   9.1  
At3g59910.1 68416.m06686 expressed protein                             25   9.1  
At3g20280.1 68416.m02569 PHD finger family protein contains Pfam...    25   9.1  

>At5g43990.2 68418.m05382 SET domain-containing protein identical to
           SET domain protein SUVR2 [Arabidopsis thaliana]
           GI:15290521; contains Pfam profiles PF00856: SET domain,
           PF05033: Pre-SET motif; identical to cDNA SET domain
           protein SUVR2 GI:15290520
          Length = 740

 Score = 26.6 bits (56), Expect = 3.0
 Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = +1

Query: 121 SVRRARVYSRCCGQ*LAPS-ALRCVYXFD 204
           ++R  +  S CCG  LAPS A RC   F+
Sbjct: 462 NIRDDQCCSSCCGDCLAPSMACRCATAFN 490


>At5g43990.1 68418.m05383 SET domain-containing protein identical to
           SET domain protein SUVR2 [Arabidopsis thaliana]
           GI:15290521; contains Pfam profiles PF00856: SET domain,
           PF05033: Pre-SET motif; identical to cDNA SET domain
           protein SUVR2 GI:15290520
          Length = 717

 Score = 26.6 bits (56), Expect = 3.0
 Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = +1

Query: 121 SVRRARVYSRCCGQ*LAPS-ALRCVYXFD 204
           ++R  +  S CCG  LAPS A RC   F+
Sbjct: 439 NIRDDQCCSSCCGDCLAPSMACRCATAFN 467


>At3g51360.1 68416.m05624 aspartyl protease family protein contains
           Eukaryotic and viral aspartyl proteases active site,
           PROSITE:PS00141
          Length = 488

 Score = 26.2 bits (55), Expect = 3.9
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = -2

Query: 231 AFHVFCFLLIKXINASESGWGKSLATTARI 142
           +F V+C  ++K +NA  S  G++  T  RI
Sbjct: 390 SFQVYCLAVLKQVNADFSIIGQNFMTNYRI 419


>At5g01550.1 68418.m00070 lectin protein kinase, putative similar to
           receptor lectin kinase 3 [Arabidopsis thaliana]
           gi|4100060|gb|AAD00733; contains protein kinase domain,
           Pfam:PF00069; contains legume lectins alpha and beta
           domains, Pfam:PF00138 and Pfam:PF00139
          Length = 688

 Score = 25.8 bits (54), Expect = 5.2
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +1

Query: 40  RLSYASIY*PIDSVKENKILKDGSF 114
           RL Y  +Y   D  KEN+I+  G F
Sbjct: 348 RLRYKDLYAATDGFKENRIVGTGGF 372


>At4g29720.1 68417.m04232 amine oxidase family protein similar to
           polyamine oxidase isoform-2 [Homo sapiens] GI:16554963;
           contains Pfam profile PF01593: amine oxidase,
           flavin-containing
          Length = 533

 Score = 25.8 bits (54), Expect = 5.2
 Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 6/54 (11%)
 Frame = -1

Query: 190 RI*ERMGQVTGHNSENTRERDV----QSTRRSHLSVFYFLLQS--RSVNKLTRN 47
           +I +++GQV GH+     E  V    ++T R+H S  +    S  R  N+L ++
Sbjct: 475 KINKKVGQVNGHDQAKVHELQVMFAGEATHRTHYSTTHGAYYSGLREANRLLKH 528


>At5g05240.1 68418.m00560 expressed protein similar to unknown
           protein (gb AAD32815.2)
          Length = 530

 Score = 25.4 bits (53), Expect = 6.9
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = +1

Query: 67  PIDSVKENKILKDGSFVCSVRRARVYSRC 153
           P+DS   N ++ D   V     A +YS C
Sbjct: 492 PLDSRAANALISDKDLVIKAAAASIYSTC 520


>At4g23150.1 68417.m03341 protein kinase family protein contains
           Pfam domain, PF00069: Protein kinase domain
          Length = 659

 Score = 25.4 bits (53), Expect = 6.9
 Identities = 13/44 (29%), Positives = 20/44 (45%)
 Frame = -1

Query: 208 INQIXKRI*ERMGQVTGHNSENTRERDVQSTRRSHLSVFYFLLQ 77
           INQ    +   M Q+    ++N R+     T  + L  FY L+Q
Sbjct: 157 INQFTNLVLSNMNQIAIEAADNPRKFSTIKTELTALQTFYGLVQ 200


>At3g48760.1 68416.m05325 zinc finger (DHHC type) family protein
           contains Pfam profile PF01529: DHHC zinc finger domain
          Length = 476

 Score = 25.4 bits (53), Expect = 6.9
 Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
 Frame = -2

Query: 273 VMCANGVCVGKFRPAFHVFCFLLIKXINASE--SGWGKSLATTARI 142
           V+C+  +C+       HVFC++ +K I  SE  + W   L T A I
Sbjct: 207 VLCSTLLCI-----YVHVFCWIYVKRIMDSENINIWKSFLKTPASI 247


>At5g06570.2 68418.m00742 expressed protein similar to PrMC3 [Pinus
           radiata] GI:5487873
          Length = 329

 Score = 25.0 bits (52), Expect = 9.1
 Identities = 12/34 (35%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
 Frame = -2

Query: 285 PXNIVMCANGVCVG-KFRPAFHVFCFLLIKXINA 187
           P  +     G C G +  P FH FC  L   +NA
Sbjct: 77  PVVVFFHGGGFCFGSRSWPHFHNFCLTLASSLNA 110


>At5g06570.1 68418.m00741 expressed protein similar to PrMC3 [Pinus
           radiata] GI:5487873
          Length = 329

 Score = 25.0 bits (52), Expect = 9.1
 Identities = 12/34 (35%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
 Frame = -2

Query: 285 PXNIVMCANGVCVG-KFRPAFHVFCFLLIKXINA 187
           P  +     G C G +  P FH FC  L   +NA
Sbjct: 77  PVVVFFHGGGFCFGSRSWPHFHNFCLTLASSLNA 110


>At3g59910.1 68416.m06686 expressed protein
          Length = 611

 Score = 25.0 bits (52), Expect = 9.1
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = -2

Query: 240 FRPAFHVFCFLLIKXINASESGWGKSLATT 151
           F  AF   CF L    N+ + GW   ++ T
Sbjct: 279 FTEAFDAACFPLTLFSNSFDPGWASGMSAT 308


>At3g20280.1 68416.m02569 PHD finger family protein contains Pfam
           profile: PF00628 PHD-finger
          Length = 743

 Score = 25.0 bits (52), Expect = 9.1
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = +3

Query: 171 PIRSQMRLXI*LIRNKTHGKLAGTSRRIHRLHTSQY 278
           PI+S +R      R   HG   GT++ +H   TS +
Sbjct: 235 PIQSSVRTADPSFRPFRHGTFTGTNQPMHYSQTSSF 270


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,025,577
Number of Sequences: 28952
Number of extensions: 105676
Number of successful extensions: 264
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 262
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 264
length of database: 12,070,560
effective HSP length: 70
effective length of database: 10,043,920
effective search space used: 281229760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)