Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_B23
         (655 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM295016-1|CAL25731.1|   96|Tribolium castaneum ecdysone recepto...    22   3.8  
AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.    21   6.7  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    21   6.7  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          21   8.9  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   8.9  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   8.9  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           21   8.9  

>AM295016-1|CAL25731.1|   96|Tribolium castaneum ecdysone receptor
           (isoform B) protein.
          Length = 96

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = +1

Query: 343 VAPYQATPENIEKAKIIISRLESIGGTDI 429
           VAP +++ E    + +++S   S+  TDI
Sbjct: 9   VAPEESSSEVTSSSALVMSPANSLASTDI 37


>AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.
          Length = 209

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = +2

Query: 275 KPIRKKQGINTFITTKFNQSWI*LHRIKPH 364
           K  +KK+GI   + T   ++W+  H   P+
Sbjct: 176 KKNQKKRGIFPKVATNILRAWLFQHLTHPY 205


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = +2

Query: 275 KPIRKKQGINTFITTKFNQSWI*LHRIKPH 364
           K  +KK+GI   + T   ++W+  H   P+
Sbjct: 332 KKNQKKRGIFPKVATNILRAWLFQHLTHPY 361


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +1

Query: 283 KEKTRYKYFYYNEIQPKL 336
           +EKT Y+Y+  N+  P +
Sbjct: 28  QEKTTYEYYENNQALPPI 45


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +1

Query: 409 SIGGTDINTALTVAVDL 459
           S+GG  + T LTV   L
Sbjct: 312 SVGGESVETVLTVTAPL 328


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +1

Query: 361 TPENIEKAKIIISRLESIGGTDI 429
           TP +  KA   +S L  +GG D+
Sbjct: 320 TPSDATKALEKMSELSKLGGEDL 342


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +1

Query: 283 KEKTRYKYFYYNEIQPKL 336
           +EKT Y+Y+  N+  P +
Sbjct: 19  QEKTTYEYYENNQALPPI 36


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.317    0.138    0.390 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,009
Number of Sequences: 336
Number of extensions: 3366
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)