Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_B21
(487 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X57398-1|CAA40655.1| 1190|Homo sapiens pm5 protein protein. 30 3.8
U91318-4|AAC15783.1| 1148|Homo sapiens pM5 (3' partial) protein. 30 3.8
BC065535-1|AAH65535.1| 1222|Homo sapiens NODAL modulator 1 protein. 30 3.8
BC041131-1|AAH41131.1| 1222|Homo sapiens NODAL modulator 2 protein. 30 3.8
BC028389-1|AAH28389.1| 1100|Homo sapiens NOMO2 protein protein. 30 3.8
BC006531-1|AAH06531.2| 807|Homo sapiens NOMO3 protein protein. 30 3.8
AY358167-1|AAQ88534.1| 206|Homo sapiens RFVG5814 protein. 30 3.8
BC033799-1|AAH33799.1| 792|Homo sapiens host cell factor C2 pro... 29 6.6
BC006558-1|AAH06558.1| 412|Homo sapiens HCFC2 protein protein. 29 6.6
AK223342-1|BAD97062.1| 792|Homo sapiens host cell factor C2 var... 29 6.6
AF117210-1|AAD27814.1| 792|Homo sapiens host cell factor 2 prot... 29 6.6
X79198-1|CAA55790.1| 1938|Homo sapiens host cell factor protein. 29 8.7
>X57398-1|CAA40655.1| 1190|Homo sapiens pm5 protein protein.
Length = 1190
Score = 30.3 bits (65), Expect = 3.8
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = -3
Query: 173 LAGEFGPEPTGIEDVLAEVWASQPIVMVF 87
L G+ PE G+E V++E AS P++ VF
Sbjct: 771 LEGQIHPELEGVEIVISEKGASSPLITVF 799
>U91318-4|AAC15783.1| 1148|Homo sapiens pM5 (3' partial) protein.
Length = 1148
Score = 30.3 bits (65), Expect = 3.8
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = -3
Query: 173 LAGEFGPEPTGIEDVLAEVWASQPIVMVF 87
L G+ PE G+E V++E AS P++ VF
Sbjct: 803 LEGQIHPELEGVEIVISEKGASSPLITVF 831
>BC065535-1|AAH65535.1| 1222|Homo sapiens NODAL modulator 1 protein.
Length = 1222
Score = 30.3 bits (65), Expect = 3.8
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = -3
Query: 173 LAGEFGPEPTGIEDVLAEVWASQPIVMVF 87
L G+ PE G+E V++E AS P++ VF
Sbjct: 803 LEGQIHPELEGVEIVISEKGASSPLITVF 831
>BC041131-1|AAH41131.1| 1222|Homo sapiens NODAL modulator 2 protein.
Length = 1222
Score = 30.3 bits (65), Expect = 3.8
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = -3
Query: 173 LAGEFGPEPTGIEDVLAEVWASQPIVMVF 87
L G+ PE G+E V++E AS P++ VF
Sbjct: 803 LEGQIHPELEGVEIVISEKGASSPLITVF 831
>BC028389-1|AAH28389.1| 1100|Homo sapiens NOMO2 protein protein.
Length = 1100
Score = 30.3 bits (65), Expect = 3.8
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = -3
Query: 173 LAGEFGPEPTGIEDVLAEVWASQPIVMVF 87
L G+ PE G+E V++E AS P++ VF
Sbjct: 636 LEGQIHPELEGVEIVISEKGASSPLITVF 664
>BC006531-1|AAH06531.2| 807|Homo sapiens NOMO3 protein protein.
Length = 807
Score = 30.3 bits (65), Expect = 3.8
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = -3
Query: 173 LAGEFGPEPTGIEDVLAEVWASQPIVMVF 87
L G+ PE G+E V++E AS P++ VF
Sbjct: 388 LEGQIHPELEGVEIVISEKGASSPLITVF 416
>AY358167-1|AAQ88534.1| 206|Homo sapiens RFVG5814 protein.
Length = 206
Score = 30.3 bits (65), Expect = 3.8
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +2
Query: 338 CLSAXXPHPQPPGTERIFGCRTCPDCVM*TELGL 439
CLSA P P G + +CP CV + LGL
Sbjct: 40 CLSAHPPQPHRRGVASLVALLSCPLCVPLSSLGL 73
>BC033799-1|AAH33799.1| 792|Homo sapiens host cell factor C2
protein.
Length = 792
Score = 29.5 bits (63), Expect = 6.6
Identities = 27/74 (36%), Positives = 33/74 (44%)
Frame = -1
Query: 484 SGFTGETIFSTTPGRKSQFRSHYAVRACPTSKYSFCTGGLWVGGXC**TVLETGRVGLET 305
SG G +I T S SH AV C K S GG C + + ++ LET
Sbjct: 172 SGVVGWSIPVTKGVVPSPRESHTAVIYC--KKDSGSPKMYVFGGMCGARLDDLWQLDLET 229
Query: 304 MSFSSKEVKGIVTL 263
MS+S E KG V L
Sbjct: 230 MSWSKPETKGTVPL 243
>BC006558-1|AAH06558.1| 412|Homo sapiens HCFC2 protein protein.
Length = 412
Score = 29.5 bits (63), Expect = 6.6
Identities = 27/74 (36%), Positives = 33/74 (44%)
Frame = -1
Query: 484 SGFTGETIFSTTPGRKSQFRSHYAVRACPTSKYSFCTGGLWVGGXC**TVLETGRVGLET 305
SG G +I T S SH AV C K S GG C + + ++ LET
Sbjct: 172 SGVVGWSIPVTKGVVPSPRESHTAVIYC--KKDSGSPKMYVFGGMCGARLDDLWQLDLET 229
Query: 304 MSFSSKEVKGIVTL 263
MS+S E KG V L
Sbjct: 230 MSWSKPETKGTVPL 243
>AK223342-1|BAD97062.1| 792|Homo sapiens host cell factor C2
variant protein.
Length = 792
Score = 29.5 bits (63), Expect = 6.6
Identities = 27/74 (36%), Positives = 33/74 (44%)
Frame = -1
Query: 484 SGFTGETIFSTTPGRKSQFRSHYAVRACPTSKYSFCTGGLWVGGXC**TVLETGRVGLET 305
SG G +I T S SH AV C K S GG C + + ++ LET
Sbjct: 172 SGVVGWSIPVTKGVVPSPRESHTAVIYC--KKDSGSPKMYVFGGMCGARLDDLWQLDLET 229
Query: 304 MSFSSKEVKGIVTL 263
MS+S E KG V L
Sbjct: 230 MSWSKPETKGTVPL 243
>AF117210-1|AAD27814.1| 792|Homo sapiens host cell factor 2
protein.
Length = 792
Score = 29.5 bits (63), Expect = 6.6
Identities = 27/74 (36%), Positives = 33/74 (44%)
Frame = -1
Query: 484 SGFTGETIFSTTPGRKSQFRSHYAVRACPTSKYSFCTGGLWVGGXC**TVLETGRVGLET 305
SG G +I T S SH AV C K S GG C + + ++ LET
Sbjct: 172 SGVVGWSIPVTKGVVPSPRESHTAVIYC--KKDSGSPKMYVFGGMCGARLDDLWQLDLET 229
Query: 304 MSFSSKEVKGIVTL 263
MS+S E KG V L
Sbjct: 230 MSWSKPETKGTVPL 243
>X79198-1|CAA55790.1| 1938|Homo sapiens host cell factor protein.
Length = 1938
Score = 29.1 bits (62), Expect = 8.7
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +1
Query: 28 RPCRRHRTTVWGTTKCLSIRNTITIG*EAHTSARTSSIPVGSGPN 162
RPC H+TT GTT +S+ + +H + S + V + P+
Sbjct: 1258 RPCETHQTTSTGTTMSVSVGALLPDATSSHRTVE-SGLEVAAAPS 1301
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,140,900
Number of Sequences: 237096
Number of extensions: 1625390
Number of successful extensions: 3720
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 3612
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3720
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4384610846
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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