Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_B16
(563 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003139-2|AAB54165.1| 244|Caenorhabditis elegans Ribosomal pro... 169 9e-43
U64856-6|AAB04989.1| 406|Caenorhabditis elegans Hypothetical pr... 29 1.7
U64856-5|AAT81185.1| 301|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z97190-2|CAM06586.1| 650|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z66564-7|CAA91472.2| 650|Caenorhabditis elegans Hypothetical pr... 29 3.1
U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical pr... 28 5.3
AF016672-5|AAB66120.1| 951|Caenorhabditis elegans Hypothetical ... 28 5.3
AC006631-2|AAL02500.1| 142|Caenorhabditis elegans Hypothetical ... 28 5.3
U39999-8|AAY44011.1| 146|Caenorhabditis elegans Hypothetical pr... 27 7.0
Z82095-7|CAN86628.1| 390|Caenorhabditis elegans Hypothetical pr... 27 9.3
Z82095-6|CAI79281.2| 412|Caenorhabditis elegans Hypothetical pr... 27 9.3
Z82095-5|CAB05026.2| 414|Caenorhabditis elegans Hypothetical pr... 27 9.3
Z48334-3|CAA88310.1| 471|Caenorhabditis elegans Hypothetical pr... 27 9.3
>AF003139-2|AAB54165.1| 244|Caenorhabditis elegans Ribosomal
protein, large subunitprotein 7 protein.
Length = 244
Score = 169 bits (412), Expect = 9e-43
Identities = 73/123 (59%), Positives = 103/123 (83%)
Frame = +3
Query: 195 KKRKEIFKRAEQYVKEYRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGVNQVSPK 374
+K+ + FKRAE+YV+EYR +++ +RL R+A +G++YVP E K+AFV+RIRG+NQ+ PK
Sbjct: 41 EKKTQYFKRAEKYVQEYRNAQKEGLRLKREAEAKGDFYVPAEHKVAFVVRIRGINQLHPK 100
Query: 375 VRKVLQLFRLRQINNGVFVRLNKATVNMLRIA*PYIAWGYPNLKSVRELVYKRGFAELNG 554
RK LQ+ RLRQINNGVFV+LNKAT+ +LRI PY+AWGYPN K++ +L+YKRG+A+++G
Sbjct: 101 PRKALQILRLRQINNGVFVKLNKATLPLLRIIEPYVAWGYPNNKTIHDLLYKRGYAKVDG 160
Query: 555 KRV 563
RV
Sbjct: 161 NRV 163
>U64856-6|AAB04989.1| 406|Caenorhabditis elegans Hypothetical
protein T25F10.6a protein.
Length = 406
Score = 29.5 bits (63), Expect = 1.7
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +2
Query: 56 KKPVKGKEDSKKLPAVPESVLKHPYKEGGTPSSPSSDHTQE 178
K P G++ P++P+SVL+ ++ + PS+ HT+E
Sbjct: 56 KSPTPGRQQVNFTPSIPQSVLRK--QQNYSSGKPSTIHTKE 94
>U64856-5|AAT81185.1| 301|Caenorhabditis elegans Hypothetical
protein T25F10.6b protein.
Length = 301
Score = 29.5 bits (63), Expect = 1.7
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +2
Query: 56 KKPVKGKEDSKKLPAVPESVLKHPYKEGGTPSSPSSDHTQE 178
K P G++ P++P+SVL+ ++ + PS+ HT+E
Sbjct: 56 KSPTPGRQQVNFTPSIPQSVLRK--QQNYSSGKPSTIHTKE 94
>Z97190-2|CAM06586.1| 650|Caenorhabditis elegans Hypothetical
protein F52D10.6 protein.
Length = 650
Score = 28.7 bits (61), Expect = 3.1
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Frame = -1
Query: 257 LLDAVFFDILFGSLKDFFPLLNGSGTPLECDLKTASSECLPPYTDASRLIPEQLAT--SY 84
++D F LFGSLK+ P+ PL L+ +S+E P + A+ + P LAT +
Sbjct: 196 VVDCRFLKELFGSLKELPPI----HQPLIDALRESSNE--PEDSKAAMVAPVLLATVHNL 249
Query: 83 CPLYPSQV 60
PLY S V
Sbjct: 250 TPLYQSLV 257
>Z66564-7|CAA91472.2| 650|Caenorhabditis elegans Hypothetical
protein F52D10.6 protein.
Length = 650
Score = 28.7 bits (61), Expect = 3.1
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Frame = -1
Query: 257 LLDAVFFDILFGSLKDFFPLLNGSGTPLECDLKTASSECLPPYTDASRLIPEQLAT--SY 84
++D F LFGSLK+ P+ PL L+ +S+E P + A+ + P LAT +
Sbjct: 196 VVDCRFLKELFGSLKELPPI----HQPLIDALRESSNE--PEDSKAAMVAPVLLATVHNL 249
Query: 83 CPLYPSQV 60
PLY S V
Sbjct: 250 TPLYQSLV 257
>U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical
protein F35A5.1 protein.
Length = 1274
Score = 27.9 bits (59), Expect = 5.3
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +2
Query: 56 KKPVKGKEDSKKLPAVPESVLKHPYKEGGTP 148
KK + K++ + LPAVP + +K+P K+ P
Sbjct: 116 KKIMAAKKEPETLPAVPPTPVKNPVKKFKAP 146
>AF016672-5|AAB66120.1| 951|Caenorhabditis elegans Hypothetical
protein F56D12.6b protein.
Length = 951
Score = 27.9 bits (59), Expect = 5.3
Identities = 15/76 (19%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Frame = +3
Query: 165 ITLKRRSASIKKRKEIFKRAEQYVKEYRIKERDEIRLARQARNRGNYYVPGEAKL-AFVI 341
++LK ++KK +E Q+VKE E + ++ ++ N+ ++Y+ + + A +
Sbjct: 1 MSLKVLQENLKKSEETVAEVAQFVKERLSVEDEYVKAINRSVNKVSHYIQNGSSIDAMWL 60
Query: 342 RIRGVNQVSPKVRKVL 389
+G ++ ++ +L
Sbjct: 61 LTKGTMELMAEIHVML 76
>AC006631-2|AAL02500.1| 142|Caenorhabditis elegans Hypothetical
protein F27B3.7 protein.
Length = 142
Score = 27.9 bits (59), Expect = 5.3
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 5/36 (13%)
Frame = +1
Query: 181 VPLPLRRGK-----KSLREPNNMSKNTASRSVMKSD 273
+PL +RR KS+ +P N+ NTA ++M SD
Sbjct: 25 IPLEIRRKHNLTQLKSMIDPQNLDDNTALEAIMNSD 60
>U39999-8|AAY44011.1| 146|Caenorhabditis elegans Hypothetical
protein F41G3.19 protein.
Length = 146
Score = 27.5 bits (58), Expect = 7.0
Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Frame = +1
Query: 310 CPVKLN*HLSSVFVVSTKYH-PRYARYCSCSGCVRSTTACSFVSTRPQ*TCFVSLSPISH 486
CP + +SV++ K P+ YC+ S STT+ S TC V L+ S
Sbjct: 60 CPKMASYCTNSVYLTLMKTQCPKTCGYCTSSSSTSSTTSSSS-------TC-VDLTNAST 111
Query: 487 GAIPT*RVSESWCTNAV 537
G R++ S+CTN++
Sbjct: 112 GVSDCTRMA-SYCTNSI 127
>Z82095-7|CAN86628.1| 390|Caenorhabditis elegans Hypothetical
protein ZK849.2c protein.
Length = 390
Score = 27.1 bits (57), Expect = 9.3
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +1
Query: 163 RSHSRGVPLPLRRGKKSLREPNNMSKN 243
R +++G+ PLR KSLR+ N + K+
Sbjct: 233 RGNTKGLTAPLRHNFKSLRKRNGVGKS 259
>Z82095-6|CAI79281.2| 412|Caenorhabditis elegans Hypothetical
protein ZK849.2b protein.
Length = 412
Score = 27.1 bits (57), Expect = 9.3
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +1
Query: 163 RSHSRGVPLPLRRGKKSLREPNNMSKN 243
R +++G+ PLR KSLR+ N + K+
Sbjct: 255 RGNTKGLTAPLRHNFKSLRKRNGVGKS 281
>Z82095-5|CAB05026.2| 414|Caenorhabditis elegans Hypothetical
protein ZK849.2a protein.
Length = 414
Score = 27.1 bits (57), Expect = 9.3
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +1
Query: 163 RSHSRGVPLPLRRGKKSLREPNNMSKN 243
R +++G+ PLR KSLR+ N + K+
Sbjct: 257 RGNTKGLTAPLRHNFKSLRKRNGVGKS 283
>Z48334-3|CAA88310.1| 471|Caenorhabditis elegans Hypothetical
protein F10B5.3 protein.
Length = 471
Score = 27.1 bits (57), Expect = 9.3
Identities = 21/71 (29%), Positives = 29/71 (40%), Gaps = 7/71 (9%)
Frame = -1
Query: 272 SDFITLLDAVFFDILFGSLKD-----FFPLLN--GSGTPLECDLKTASSECLPPYTDASR 114
S I+L FF LFG+ F P + S T E A+S PP TD +
Sbjct: 172 SSMISLWSNPFFSALFGNTTGTPSLPFSPQSDTENSRTQSEGSSPRANSTSTPPTTDLEK 231
Query: 113 LIPEQLATSYC 81
++P +C
Sbjct: 232 IVPNDDKEGWC 242
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,563,920
Number of Sequences: 27780
Number of extensions: 247745
Number of successful extensions: 922
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 859
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 922
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1166125180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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