Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_B15
(550 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X89602-1|CAA61761.1| 416|Homo sapiens rTSbeta protein. 255 9e-68
X67098-2|CAA47472.1| 361|Homo sapiens protein ( H.sapiens rTS a... 255 9e-68
BC001285-1|AAH01285.2| 443|Homo sapiens enolase superfamily mem... 255 9e-68
AF305057-2|AAG29536.1| 361|Homo sapiens RTS alpha protein. 255 9e-68
AF305057-1|AAG29537.1| 416|Homo sapiens RTS beta protein. 255 9e-68
AK127818-1|BAC87148.1| 474|Homo sapiens protein ( Homo sapiens ... 219 4e-57
AY684169-1|AAT74627.1| 3052|Homo sapiens REV3-like, catalytic su... 30 6.1
AL512325-1|CAI20998.1| 3130|Homo sapiens REV3-like, catalytic su... 30 6.1
AL136310-2|CAI20509.1| 3130|Homo sapiens REV3-like, catalytic su... 30 6.1
AL080317-2|CAI19192.1| 3130|Homo sapiens REV3-like, catalytic su... 30 6.1
AF179429-1|AAG09403.1| 3052|Homo sapiens DNA polymerase zeta cat... 30 6.1
AF179428-1|AAG09402.1| 3052|Homo sapiens DNA polymerase zeta cat... 30 6.1
AF157476-1|AAD40184.1| 3130|Homo sapiens DNA polymerase zeta cat... 30 6.1
AF078695-1|AAC28460.1| 3052|Homo sapiens DNA polymerase zeta cat... 30 6.1
AF071798-1|AAC24009.1| 3130|Homo sapiens DNA polymerase zeta cat... 30 6.1
AF058701-1|AAC24357.1| 3130|Homo sapiens DNA polymerase zeta cat... 30 6.1
AF035537-1|AAB88486.1| 3052|Homo sapiens DNA polymerase zeta pro... 30 6.1
>X89602-1|CAA61761.1| 416|Homo sapiens rTSbeta protein.
Length = 416
Score = 255 bits (624), Expect = 9e-68
Identities = 111/182 (60%), Positives = 141/182 (77%)
Frame = +2
Query: 2 VNEAIEWMKKLAPLKPIWIEEPTSPDDVLGHATISKALKPYGIGVATGEMCANRVLFKQF 181
V EA+EWM KLA KP+WIEEPTSPDD+LGHATISKAL P GIG+ATGE C NRV+FKQ
Sbjct: 230 VPEAVEWMSKLAKFKPLWIEEPTSPDDILGHATISKALVPLGIGIATGEQCHNRVIFKQL 289
Query: 182 LQSGAMQYCQIDSARIGGINEILSVYLMAAKLGVKVCPHAGGVGLCEMVQHLQCWDYTSV 361
LQ+ A+Q+ QIDS R+G +NE LSV LMA K + VCPHAGGVGLCE+VQHL +DY SV
Sbjct: 290 LQAKALQFLQIDSCRLGSVNENLSVLLMAKKFEIPVCPHAGGVGLCELVQHLIIFDYISV 349
Query: 362 SGTMEDRLIEYIDQQHEHFTDPCIVENARYLAPKLPGYSTQFLPATLEKYTYPRGSEWKR 541
S ++E+R+ EY+D HEHF P +++ A Y+ PK PGYST+ +++K+ YP G WK+
Sbjct: 350 SASLENRVCEYVDHLHEHFKYPVMIQRASYMPPKDPGYSTEMKEESVKKHQYPDGEVWKK 409
Query: 542 MI 547
++
Sbjct: 410 LL 411
>X67098-2|CAA47472.1| 361|Homo sapiens protein ( H.sapiens rTS
alpha mRNA containing four open reading frames. ).
Length = 361
Score = 255 bits (624), Expect = 9e-68
Identities = 111/182 (60%), Positives = 141/182 (77%)
Frame = +2
Query: 2 VNEAIEWMKKLAPLKPIWIEEPTSPDDVLGHATISKALKPYGIGVATGEMCANRVLFKQF 181
V EA+EWM KLA KP+WIEEPTSPDD+LGHATISKAL P GIG+ATGE C NRV+FKQ
Sbjct: 175 VPEAVEWMSKLAKFKPLWIEEPTSPDDILGHATISKALVPLGIGIATGEQCHNRVIFKQL 234
Query: 182 LQSGAMQYCQIDSARIGGINEILSVYLMAAKLGVKVCPHAGGVGLCEMVQHLQCWDYTSV 361
LQ+ A+Q+ QIDS R+G +NE LSV LMA K + VCPHAGGVGLCE+VQHL +DY SV
Sbjct: 235 LQAKALQFLQIDSCRLGSVNENLSVLLMAKKFEIPVCPHAGGVGLCELVQHLIIFDYISV 294
Query: 362 SGTMEDRLIEYIDQQHEHFTDPCIVENARYLAPKLPGYSTQFLPATLEKYTYPRGSEWKR 541
S ++E+R+ EY+D HEHF P +++ A Y+ PK PGYST+ +++K+ YP G WK+
Sbjct: 295 SASLENRVCEYVDHLHEHFKYPVMIQRASYMPPKDPGYSTEMKEESVKKHQYPDGEVWKK 354
Query: 542 MI 547
++
Sbjct: 355 LL 356
>BC001285-1|AAH01285.2| 443|Homo sapiens enolase superfamily member
1 protein.
Length = 443
Score = 255 bits (624), Expect = 9e-68
Identities = 111/182 (60%), Positives = 141/182 (77%)
Frame = +2
Query: 2 VNEAIEWMKKLAPLKPIWIEEPTSPDDVLGHATISKALKPYGIGVATGEMCANRVLFKQF 181
V EA+EWM KLA KP+WIEEPTSPDD+LGHATISKAL P GIG+ATGE C NRV+FKQ
Sbjct: 257 VPEAVEWMSKLAKFKPLWIEEPTSPDDILGHATISKALVPLGIGIATGEQCHNRVIFKQL 316
Query: 182 LQSGAMQYCQIDSARIGGINEILSVYLMAAKLGVKVCPHAGGVGLCEMVQHLQCWDYTSV 361
LQ+ A+Q+ QIDS R+G +NE LSV LMA K + VCPHAGGVGLCE+VQHL +DY SV
Sbjct: 317 LQAKALQFLQIDSCRLGSVNENLSVLLMAKKFEIPVCPHAGGVGLCELVQHLIIFDYISV 376
Query: 362 SGTMEDRLIEYIDQQHEHFTDPCIVENARYLAPKLPGYSTQFLPATLEKYTYPRGSEWKR 541
S ++E+R+ EY+D HEHF P +++ A Y+ PK PGYST+ +++K+ YP G WK+
Sbjct: 377 SASLENRVCEYVDHLHEHFKYPVMIQRASYMPPKDPGYSTEMKEESVKKHQYPDGEVWKK 436
Query: 542 MI 547
++
Sbjct: 437 LL 438
>AF305057-2|AAG29536.1| 361|Homo sapiens RTS alpha protein.
Length = 361
Score = 255 bits (624), Expect = 9e-68
Identities = 111/182 (60%), Positives = 141/182 (77%)
Frame = +2
Query: 2 VNEAIEWMKKLAPLKPIWIEEPTSPDDVLGHATISKALKPYGIGVATGEMCANRVLFKQF 181
V EA+EWM KLA KP+WIEEPTSPDD+LGHATISKAL P GIG+ATGE C NRV+FKQ
Sbjct: 175 VPEAVEWMSKLAKFKPLWIEEPTSPDDILGHATISKALVPLGIGIATGEQCHNRVIFKQL 234
Query: 182 LQSGAMQYCQIDSARIGGINEILSVYLMAAKLGVKVCPHAGGVGLCEMVQHLQCWDYTSV 361
LQ+ A+Q+ QIDS R+G +NE LSV LMA K + VCPHAGGVGLCE+VQHL +DY SV
Sbjct: 235 LQAKALQFLQIDSCRLGSVNENLSVLLMAKKFEIPVCPHAGGVGLCELVQHLIIFDYISV 294
Query: 362 SGTMEDRLIEYIDQQHEHFTDPCIVENARYLAPKLPGYSTQFLPATLEKYTYPRGSEWKR 541
S ++E+R+ EY+D HEHF P +++ A Y+ PK PGYST+ +++K+ YP G WK+
Sbjct: 295 SASLENRVCEYVDHLHEHFKYPVMIQRASYMPPKDPGYSTEMKEESVKKHQYPDGEVWKK 354
Query: 542 MI 547
++
Sbjct: 355 LL 356
>AF305057-1|AAG29537.1| 416|Homo sapiens RTS beta protein.
Length = 416
Score = 255 bits (624), Expect = 9e-68
Identities = 111/182 (60%), Positives = 141/182 (77%)
Frame = +2
Query: 2 VNEAIEWMKKLAPLKPIWIEEPTSPDDVLGHATISKALKPYGIGVATGEMCANRVLFKQF 181
V EA+EWM KLA KP+WIEEPTSPDD+LGHATISKAL P GIG+ATGE C NRV+FKQ
Sbjct: 230 VPEAVEWMSKLAKFKPLWIEEPTSPDDILGHATISKALVPLGIGIATGEQCHNRVIFKQL 289
Query: 182 LQSGAMQYCQIDSARIGGINEILSVYLMAAKLGVKVCPHAGGVGLCEMVQHLQCWDYTSV 361
LQ+ A+Q+ QIDS R+G +NE LSV LMA K + VCPHAGGVGLCE+VQHL +DY SV
Sbjct: 290 LQAKALQFLQIDSCRLGSVNENLSVLLMAKKFEIPVCPHAGGVGLCELVQHLIIFDYISV 349
Query: 362 SGTMEDRLIEYIDQQHEHFTDPCIVENARYLAPKLPGYSTQFLPATLEKYTYPRGSEWKR 541
S ++E+R+ EY+D HEHF P +++ A Y+ PK PGYST+ +++K+ YP G WK+
Sbjct: 350 SASLENRVCEYVDHLHEHFKYPVMIQRASYMPPKDPGYSTEMKEESVKKHQYPDGEVWKK 409
Query: 542 MI 547
++
Sbjct: 410 LL 411
>AK127818-1|BAC87148.1| 474|Homo sapiens protein ( Homo sapiens
cDNA FLJ45920 fis, clone PLACE6003004, highly similar
to Homo sapiens rTS beta protein (HSRTSBETA). ).
Length = 474
Score = 219 bits (536), Expect = 4e-57
Identities = 101/182 (55%), Positives = 130/182 (71%)
Frame = +2
Query: 2 VNEAIEWMKKLAPLKPIWIEEPTSPDDVLGHATISKALKPYGIGVATGEMCANRVLFKQF 181
V EA+EWM KLA KP+WIEEPTSPDD+LGHATISK C NRV+FKQ
Sbjct: 302 VPEAVEWMSKLAKFKPLWIEEPTSPDDILGHATISK--------------CHNRVIFKQL 347
Query: 182 LQSGAMQYCQIDSARIGGINEILSVYLMAAKLGVKVCPHAGGVGLCEMVQHLQCWDYTSV 361
LQ+ A+Q+ QIDS R+G +NE LSV LMA K + VCPHAGGVGLCE+VQHL +DY SV
Sbjct: 348 LQAKALQFLQIDSCRLGSVNENLSVLLMAKKFEIPVCPHAGGVGLCELVQHLIIFDYISV 407
Query: 362 SGTMEDRLIEYIDQQHEHFTDPCIVENARYLAPKLPGYSTQFLPATLEKYTYPRGSEWKR 541
S ++E+R+ EY+D HEHF P +++ A Y+ PK PGYST+ +++K+ YP G WK+
Sbjct: 408 SASLENRVCEYVDHLHEHFKYPVMIQRASYMPPKDPGYSTEMKEESVKKHQYPDGEVWKK 467
Query: 542 MI 547
++
Sbjct: 468 LL 469
>AY684169-1|AAT74627.1| 3052|Homo sapiens REV3-like, catalytic
subunit of DNA polymerase zeta (yeast) protein.
Length = 3052
Score = 29.9 bits (64), Expect = 6.1
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +2
Query: 8 EAIEWMKKLAPLKPIWIEEPTSP 76
E +E KKLAPLK W + P SP
Sbjct: 931 EKMELYKKLAPLKDFWPKVPDSP 953
>AL512325-1|CAI20998.1| 3130|Homo sapiens REV3-like, catalytic subunit
of DNA polymerase zeta (yeast) protein.
Length = 3130
Score = 29.9 bits (64), Expect = 6.1
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +2
Query: 8 EAIEWMKKLAPLKPIWIEEPTSP 76
E +E KKLAPLK W + P SP
Sbjct: 1009 EKMELYKKLAPLKDFWPKVPDSP 1031
>AL136310-2|CAI20509.1| 3130|Homo sapiens REV3-like, catalytic subunit
of DNA polymerase zeta (yeast) protein.
Length = 3130
Score = 29.9 bits (64), Expect = 6.1
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +2
Query: 8 EAIEWMKKLAPLKPIWIEEPTSP 76
E +E KKLAPLK W + P SP
Sbjct: 1009 EKMELYKKLAPLKDFWPKVPDSP 1031
>AL080317-2|CAI19192.1| 3130|Homo sapiens REV3-like, catalytic subunit
of DNA polymerase zeta (yeast) protein.
Length = 3130
Score = 29.9 bits (64), Expect = 6.1
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +2
Query: 8 EAIEWMKKLAPLKPIWIEEPTSP 76
E +E KKLAPLK W + P SP
Sbjct: 1009 EKMELYKKLAPLKDFWPKVPDSP 1031
>AF179429-1|AAG09403.1| 3052|Homo sapiens DNA polymerase zeta
catalytic subunit variant 2 protein.
Length = 3052
Score = 29.9 bits (64), Expect = 6.1
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +2
Query: 8 EAIEWMKKLAPLKPIWIEEPTSP 76
E +E KKLAPLK W + P SP
Sbjct: 931 EKMELYKKLAPLKDFWPKVPDSP 953
>AF179428-1|AAG09402.1| 3052|Homo sapiens DNA polymerase zeta
catalytic subunit variant 1 protein.
Length = 3052
Score = 29.9 bits (64), Expect = 6.1
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +2
Query: 8 EAIEWMKKLAPLKPIWIEEPTSP 76
E +E KKLAPLK W + P SP
Sbjct: 931 EKMELYKKLAPLKDFWPKVPDSP 953
>AF157476-1|AAD40184.1| 3130|Homo sapiens DNA polymerase zeta
catalytic subunit protein.
Length = 3130
Score = 29.9 bits (64), Expect = 6.1
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +2
Query: 8 EAIEWMKKLAPLKPIWIEEPTSP 76
E +E KKLAPLK W + P SP
Sbjct: 1009 EKMELYKKLAPLKDFWPKVPDSP 1031
>AF078695-1|AAC28460.1| 3052|Homo sapiens DNA polymerase zeta
catalytic subunit protein.
Length = 3052
Score = 29.9 bits (64), Expect = 6.1
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +2
Query: 8 EAIEWMKKLAPLKPIWIEEPTSP 76
E +E KKLAPLK W + P SP
Sbjct: 931 EKMELYKKLAPLKDFWPKVPDSP 953
>AF071798-1|AAC24009.1| 3130|Homo sapiens DNA polymerase zeta
catalytic subunit protein.
Length = 3130
Score = 29.9 bits (64), Expect = 6.1
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +2
Query: 8 EAIEWMKKLAPLKPIWIEEPTSP 76
E +E KKLAPLK W + P SP
Sbjct: 1009 EKMELYKKLAPLKDFWPKVPDSP 1031
>AF058701-1|AAC24357.1| 3130|Homo sapiens DNA polymerase zeta
catalytic subunit protein.
Length = 3130
Score = 29.9 bits (64), Expect = 6.1
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +2
Query: 8 EAIEWMKKLAPLKPIWIEEPTSP 76
E +E KKLAPLK W + P SP
Sbjct: 1009 EKMELYKKLAPLKDFWPKVPDSP 1031
>AF035537-1|AAB88486.1| 3052|Homo sapiens DNA polymerase zeta
protein.
Length = 3052
Score = 29.9 bits (64), Expect = 6.1
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +2
Query: 8 EAIEWMKKLAPLKPIWIEEPTSP 76
E +E KKLAPLK W + P SP
Sbjct: 931 EKMELYKKLAPLKDFWPKVPDSP 953
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,904,424
Number of Sequences: 237096
Number of extensions: 2188917
Number of successful extensions: 4992
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 4765
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4991
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5421005376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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