Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_B15
         (550 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    23   2.7  
AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor p...    23   2.7  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    23   2.7  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    22   3.6  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    21   6.2  
AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.        21   8.2  

>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 10/36 (27%), Positives = 15/36 (41%)
 Frame = -2

Query: 150 ISPVATPIPYGFKAFDIVACPSTSSGEVGSSIHIGF 43
           +SP A     GF    ++   S  S     +IH+ F
Sbjct: 109 LSPAAVSYTSGFYHIPVIGISSRDSAFSDKNIHVSF 144


>AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor
           protein.
          Length = 139

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -2

Query: 204 YCIAPLCRNCLNRTRFA 154
           Y +   CRNC++ T F+
Sbjct: 29  YLVRAFCRNCIHPTVFS 45


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -2

Query: 204 YCIAPLCRNCLNRTRFA 154
           Y +   CRNC++ T F+
Sbjct: 477 YLVRAFCRNCIHPTVFS 493


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +3

Query: 474 IAHNSCLPHWKSTRIQE 524
           I HN+CL    STRI +
Sbjct: 294 IQHNNCLTRIPSTRINK 310


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +1

Query: 253 RLSNGRKTWS 282
           RL +GRKTW+
Sbjct: 515 RLDHGRKTWT 524


>AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.
          Length = 200

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = +3

Query: 213 STRPASEASTKFYPFI 260
           ST PA+  ++  YP++
Sbjct: 77  STSPAARTTSSMYPYV 92


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,818
Number of Sequences: 438
Number of extensions: 4191
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15704448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)