Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_B12
(516 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A3DIL2 Cluster: Putative uncharacterized protein; n=1; ... 35 0.96
UniRef50_Q54VA4 Cluster: RWP-RK domain-containing protein; n=1; ... 35 1.3
UniRef50_Q8IHX4 Cluster: Putative uncharacterized protein; n=1; ... 34 2.2
UniRef50_Q54SL8 Cluster: Putative uncharacterized protein; n=1; ... 33 2.9
UniRef50_Q4N6N1 Cluster: Putative uncharacterized protein; n=2; ... 33 3.9
UniRef50_Q7RDV9 Cluster: Putative uncharacterized protein PY0531... 33 5.1
UniRef50_Q7PDL7 Cluster: ERYTHROCYTE MEMBRANE PROTEIN PFEMP3; n=... 33 5.1
UniRef50_Q54JG8 Cluster: Putative uncharacterized protein; n=1; ... 33 5.1
UniRef50_UPI00006CAE79 Cluster: hypothetical protein TTHERM_0076... 32 6.8
UniRef50_UPI00006CB603 Cluster: hypothetical protein TTHERM_0044... 32 8.9
UniRef50_A3IHB3 Cluster: Putative uncharacterized protein; n=1; ... 32 8.9
UniRef50_Q54SL5 Cluster: Putative uncharacterized protein; n=1; ... 32 8.9
UniRef50_Q54G52 Cluster: Putative uncharacterized protein; n=1; ... 32 8.9
UniRef50_Q54C77 Cluster: Putative uncharacterized protein; n=1; ... 32 8.9
UniRef50_Q23ED9 Cluster: ATP-dependent DNA helicase, RecQ family... 32 8.9
>UniRef50_A3DIL2 Cluster: Putative uncharacterized protein; n=1;
Clostridium thermocellum ATCC 27405|Rep: Putative
uncharacterized protein - Clostridium thermocellum
(strain ATCC 27405 / DSM 1237)
Length = 138
Score = 35.1 bits (77), Expect = 0.96
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = -3
Query: 286 NEMTDNCGDSMIRSQTIQNSMTDNCNDSMNSSPNIQNAMTDN 161
N + CG + S +++ D NDS N +PNI + M N
Sbjct: 15 NSFCEWCGGKLPESAEVKSEYVDGSNDSFNPNPNINSGMNTN 56
>UniRef50_Q54VA4 Cluster: RWP-RK domain-containing protein; n=1;
Dictyostelium discoideum AX4|Rep: RWP-RK
domain-containing protein - Dictyostelium discoideum AX4
Length = 838
Score = 34.7 bits (76), Expect = 1.3
Identities = 17/50 (34%), Positives = 29/50 (58%)
Frame = -3
Query: 286 NEMTDNCGDSMIRSQTIQNSMTDNCNDSMNSSPNIQNAMTDNCD*KNGSS 137
N M +N +M + + N+M +N N++MN+S N N M +N + N +S
Sbjct: 493 NGMNNNMNSNM--NSNMNNNMNNNMNNNMNNSMNNMNNMNNNTNNNNNNS 540
Score = 31.9 bits (69), Expect = 8.9
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = -3
Query: 286 NEMTDNCGDSMIRSQTIQNSMTDNCNDSMNSSPNIQNAMTDNCD*KNGSSIPN 128
N M N +M + + N+M +N N+SMN+ N+ N +N + N S+ N
Sbjct: 497 NNMNSNMNSNM--NNNMNNNMNNNMNNSMNNMNNMNNNTNNNNNNSNMSNNMN 547
>UniRef50_Q8IHX4 Cluster: Putative uncharacterized protein; n=1;
Plasmodium falciparum 3D7|Rep: Putative uncharacterized
protein - Plasmodium falciparum (isolate 3D7)
Length = 1791
Score = 33.9 bits (74), Expect = 2.2
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = -3
Query: 286 NEMTDNCGDSMIRSQTIQNSMTDNCNDSMNSSPNIQNAMTDN 161
++M DN D+M + + ++M DN ND+MN N N DN
Sbjct: 1349 DKMYDNMNDNM--NDNMNDNMNDNMNDNMNEDDNNNNNYYDN 1388
>UniRef50_Q54SL8 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 753
Score = 33.5 bits (73), Expect = 2.9
Identities = 20/65 (30%), Positives = 33/65 (50%)
Frame = -3
Query: 325 NNCEMMILSPTFQNEMTDNCGDSMIRSQTIQNSMTDNCNDSMNSSPNIQNAMTDNCD*KN 146
NN E M++ Q DN ++++ +Q N DN ND+ N++ N N +N + N
Sbjct: 134 NNNENMLIDQNNQLNSNDNNNENILNNQINSN---DNDNDNNNNNNNNNNNNNNNNNNNN 190
Query: 145 GSSIP 131
+S P
Sbjct: 191 NTSNP 195
>UniRef50_Q4N6N1 Cluster: Putative uncharacterized protein; n=2;
Theileria|Rep: Putative uncharacterized protein -
Theileria parva
Length = 603
Score = 33.1 bits (72), Expect = 3.9
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = -3
Query: 301 SPTFQNEMTDNCGDSMIRSQTIQN---SMTDNCNDSMNSSPNIQNAMTDNCD*KNGSSIP 131
+P N TD + +Q QN ++ +NC+++ N+SPN++N NC+ G +
Sbjct: 503 NPQISNNTTDTVNSTQ-NTQNTQNPPDNLGNNCHNTDNNSPNVEN---KNCNNNMGKDLQ 558
Query: 130 N 128
N
Sbjct: 559 N 559
>UniRef50_Q7RDV9 Cluster: Putative uncharacterized protein PY05311;
n=6; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein PY05311 - Plasmodium yoelii yoelii
Length = 1263
Score = 32.7 bits (71), Expect = 5.1
Identities = 18/52 (34%), Positives = 28/52 (53%)
Frame = -3
Query: 340 RRIERNNCEMMILSPTFQNEMTDNCGDSMIRSQTIQNSMTDNCNDSMNSSPN 185
++I +NN E +I NEM +N + I+ +T QN+ +N N S N N
Sbjct: 330 KQINKNNFEQIINDMILNNEMLEN--GTWIKEKTFQNNNNNNNNISYNDIYN 379
>UniRef50_Q7PDL7 Cluster: ERYTHROCYTE MEMBRANE PROTEIN PFEMP3; n=4;
Plasmodium (Vinckeia)|Rep: ERYTHROCYTE MEMBRANE PROTEIN
PFEMP3 - Plasmodium yoelii yoelii
Length = 2179
Score = 32.7 bits (71), Expect = 5.1
Identities = 20/63 (31%), Positives = 37/63 (58%), Gaps = 6/63 (9%)
Frame = -3
Query: 325 NNCEM---MILSPTFQNEMTDNCGDSMIRSQTIQNSMTDNCNDSMNSS---PNIQNAMTD 164
NN E+ ++++ QN +T+N + MI + QN ++ N N+ +N++ N++N MT
Sbjct: 1143 NNSELYRNIVINNNTQNLITENNQNVMINNMYDQNQISINANNIVNTTTQITNMKNNMTI 1202
Query: 163 NCD 155
N D
Sbjct: 1203 NSD 1205
>UniRef50_Q54JG8 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 1082
Score = 32.7 bits (71), Expect = 5.1
Identities = 15/52 (28%), Positives = 27/52 (51%)
Frame = -3
Query: 286 NEMTDNCGDSMIRSQTIQNSMTDNCNDSMNSSPNIQNAMTDNCD*KNGSSIP 131
N ++ ++ + T N+ +N N++ N++ N N TDN + NGS P
Sbjct: 931 NSSNNSSSSNLNHNNTNNNNNNNNNNNNNNNNNNNNNTSTDNLNESNGSVTP 982
>UniRef50_UPI00006CAE79 Cluster: hypothetical protein
TTHERM_00765290; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00765290 - Tetrahymena
thermophila SB210
Length = 555
Score = 32.3 bits (70), Expect = 6.8
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = -3
Query: 238 IQNSMTDNCNDSMNSSPNIQNAMTDNCD*KNGSSIPN*TVN 116
IQNS + N NDS N +P+ QN + G+ PN VN
Sbjct: 349 IQNSYSSNTNDSSNHNPSQQNNSGEIKKTSTGTKSPNNQVN 389
>UniRef50_UPI00006CB603 Cluster: hypothetical protein
TTHERM_00444130; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00444130 - Tetrahymena
thermophila SB210
Length = 833
Score = 31.9 bits (69), Expect = 8.9
Identities = 17/65 (26%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Frame = -3
Query: 322 NCEMMILSPTFQNEMTDNCGDSMIRSQTIQNSMTDNC--NDSMNSSPNIQNAMTDNCD*K 149
N + I+S Q+ + D SQ++ S+++N N +MN+ QN+ + C+
Sbjct: 311 NNNLNIISHQNQSSNNNQARDGQNNSQSVSTSLSNNYGGNSAMNNQNGSQNSNNNQCNGN 370
Query: 148 NGSSI 134
N ++I
Sbjct: 371 NANNI 375
>UniRef50_A3IHB3 Cluster: Putative uncharacterized protein; n=1;
Cyanothece sp. CCY 0110|Rep: Putative uncharacterized
protein - Cyanothece sp. CCY 0110
Length = 312
Score = 31.9 bits (69), Expect = 8.9
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = -3
Query: 328 RNNCEMMILSPTFQNEMTDNC-GDSMIRSQTIQNSMTDNCNDSMNSSPNIQNAMTDNCD* 152
+N+C++ + +P ++ D+C G+S SQ + N + S N N +D D
Sbjct: 12 KNSCDLKLPNPDLLSQPPDDCQGNSSSNSQDSEKENDSNNSSSENQQDN-NKTKSDQIDG 70
Query: 151 KNGS 140
NGS
Sbjct: 71 FNGS 74
>UniRef50_Q54SL5 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 1331
Score = 31.9 bits (69), Expect = 8.9
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Frame = -3
Query: 340 RRIERNNCEMMILSPTFQNEMTDNCGDSMI----RSQTIQNSMTDNCNDSMNSSPNIQNA 173
+RI +NN + +E T + D+ I S T +S T++ +DS NS+ N N+
Sbjct: 981 KRILKNNNNIESSINNNDDESTQDSSDNSIVDNTSSSTSSSSSTNSNSDSNNSNSNNNNS 1040
Query: 172 MTDNCD*KN 146
+DN + KN
Sbjct: 1041 NSDNNNKKN 1049
>UniRef50_Q54G52 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 1089
Score = 31.9 bits (69), Expect = 8.9
Identities = 14/60 (23%), Positives = 32/60 (53%)
Frame = -3
Query: 307 ILSPTFQNEMTDNCGDSMIRSQTIQNSMTDNCNDSMNSSPNIQNAMTDNCD*KNGSSIPN 128
++ F+NE+ D C + ++ + N+ +N N++ N++ N N +N + N ++ N
Sbjct: 289 LIQSDFKNEIIDECYNYLLNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 348
>UniRef50_Q54C77 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 1186
Score = 31.9 bits (69), Expect = 8.9
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = -3
Query: 325 NNCEMMILSPTFQNEMTDNCGDSMIRSQTIQNSMTDNCNDSMNSSPNIQNAMTDNCD-*K 149
NN E + LS + + + N S+ S N+ +N N++ N +PN+ +NC+
Sbjct: 772 NNNESVNLSTSPGSLVNSNSNPSISNSLNNNNNNNNNNNNNNNGNPNVIITTNNNCNSNS 831
Query: 148 NGSSI 134
NG++I
Sbjct: 832 NGNNI 836
>UniRef50_Q23ED9 Cluster: ATP-dependent DNA helicase, RecQ family
protein; n=1; Tetrahymena thermophila SB210|Rep:
ATP-dependent DNA helicase, RecQ family protein -
Tetrahymena thermophila SB210
Length = 1198
Score = 31.9 bits (69), Expect = 8.9
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = -3
Query: 298 PTFQNEMTDNCGDSMIRSQTIQNSMTDNCNDSMNSSPNIQN 176
P F N+M DNC + +S IQ T +C + + ++ N
Sbjct: 789 PKFCNKMCDNCRNQTSKSNIIQKDFTQDCKNILQEYLSMYN 829
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 362,172,997
Number of Sequences: 1657284
Number of extensions: 5394838
Number of successful extensions: 15788
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 14702
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15665
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 31782822356
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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