Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_B12
         (516 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41367-1|AAB04167.1| 1037|Drosophila melanogaster transcription ...    29   2.8  
AY129443-1|AAM76185.1| 1037|Drosophila melanogaster LD17962p pro...    29   2.8  
AE014296-2382|AAF49741.1| 1037|Drosophila melanogaster CG3836-PA...    29   2.8  

>U41367-1|AAB04167.1| 1037|Drosophila melanogaster transcription
           factor protein.
          Length = 1037

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 16/66 (24%), Positives = 32/66 (48%)
 Frame = -3

Query: 352 ITPERRIERNNCEMMILSPTFQNEMTDNCGDSMIRSQTIQNSMTDNCNDSMNSSPNIQNA 173
           +TPE+ +E+NN +  +  P F  + T +    +I  +   +S  ++      S   ++ A
Sbjct: 238 LTPEKSLEKNNTDSTVSQPEFFVKQTRDPRLLIIGRKNSTSSFAESKASKSISGDPLETA 297

Query: 172 MTDNCD 155
           M D+ D
Sbjct: 298 MEDSGD 303


>AY129443-1|AAM76185.1| 1037|Drosophila melanogaster LD17962p
           protein.
          Length = 1037

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 16/66 (24%), Positives = 32/66 (48%)
 Frame = -3

Query: 352 ITPERRIERNNCEMMILSPTFQNEMTDNCGDSMIRSQTIQNSMTDNCNDSMNSSPNIQNA 173
           +TPE+ +E+NN +  +  P F  + T +    +I  +   +S  ++      S   ++ A
Sbjct: 238 LTPEKSLEKNNTDSTVSQPEFFVKQTRDPRLLIIGRKNSTSSFAESKASKSISGDPLETA 297

Query: 172 MTDNCD 155
           M D+ D
Sbjct: 298 MEDSGD 303


>AE014296-2382|AAF49741.1| 1037|Drosophila melanogaster CG3836-PA
           protein.
          Length = 1037

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 16/66 (24%), Positives = 32/66 (48%)
 Frame = -3

Query: 352 ITPERRIERNNCEMMILSPTFQNEMTDNCGDSMIRSQTIQNSMTDNCNDSMNSSPNIQNA 173
           +TPE+ +E+NN +  +  P F  + T +    +I  +   +S  ++      S   ++ A
Sbjct: 238 LTPEKSLEKNNTDSTVSQPEFFVKQTRDPRLLIIGRKNSTSSFAESKASKSISGDPLETA 297

Query: 172 MTDNCD 155
           M D+ D
Sbjct: 298 MEDSGD 303


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,253,278
Number of Sequences: 53049
Number of extensions: 253067
Number of successful extensions: 571
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 563
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 571
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1887744768
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)