Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_B09
         (553 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    25   0.39 
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    22   4.8  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    21   6.3  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   6.3  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   6.3  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    21   8.3  

>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 25.4 bits (53), Expect = 0.39
 Identities = 13/31 (41%), Positives = 21/31 (67%), Gaps = 5/31 (16%)
 Frame = +1

Query: 226 KTTGLHIQVQVG---GAPLADV--LDLAAYC 303
           ++TGLH+Q++VG   GA +A +  L +  YC
Sbjct: 509 RSTGLHLQIRVGVHSGAVVAGIVGLKMPRYC 539


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +3

Query: 447 ERGGYKCSGFRKRGYRL 497
           +R GYK +GF +  Y++
Sbjct: 194 QRVGYKVTGFEELAYKM 210


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -3

Query: 503 GIQAVASFTKAGAFISTPLL 444
           G+  VA +  AGA  S PLL
Sbjct: 157 GLMIVAVWVLAGAITSPPLL 176


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -3

Query: 320  SAPTS*QYAARSKTSASGAPPTCT 249
            S+P+S   + R++  A G PP  T
Sbjct: 1483 SSPSSPVLSVRTQGQAPGIPPAAT 1506


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -3

Query: 320  SAPTS*QYAARSKTSASGAPPTCT 249
            S+P+S   + R++  A G PP  T
Sbjct: 1479 SSPSSPVLSVRTQGQAPGIPPAAT 1502


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +1

Query: 472 AFVKEATAWIPNFKGLK 522
           A V++ATA +PN +G +
Sbjct: 660 ALVRDATARLPNGEGTR 676


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,895
Number of Sequences: 438
Number of extensions: 3337
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15827139
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)