Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_B08
(515 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62266 Cluster: 40S ribosomal protein S23; n=141; cellu... 149 3e-35
UniRef50_P32827 Cluster: 40S ribosomal protein S23; n=66; cellul... 137 2e-31
UniRef50_Q5AAQ9 Cluster: Putative uncharacterized protein; n=1; ... 101 7e-21
UniRef50_Q8ZYQ4 Cluster: 30S ribosomal protein S12P; n=17; Archa... 98 1e-19
UniRef50_Q8S6I4 Cluster: Putative 40s ribosomal protein S23; n=4... 91 1e-17
UniRef50_Q0W8G5 Cluster: 30S ribosomal protein S12P; n=20; cellu... 89 7e-17
UniRef50_Q8H6J0 Cluster: Putative 40S ribosomal protein; n=1; Ze... 88 1e-16
UniRef50_A3H7W0 Cluster: Protein splicing (Intein) site; n=4; ce... 88 1e-16
UniRef50_UPI00004CC6C0 Cluster: PREDICTED: hypothetical protein;... 69 5e-11
UniRef50_A3B198 Cluster: Putative uncharacterized protein; n=1; ... 51 1e-05
UniRef50_Q8BGG2 Cluster: Adult male spinal cord cDNA, RIKEN full... 43 0.004
UniRef50_Q7SZ18 Cluster: Mrps12-prov protein; n=8; Euteleostomi|... 42 0.011
UniRef50_Q5K6X0 Cluster: Ribosomal protein S12, putative; n=2; D... 42 0.011
UniRef50_O70089 Cluster: 30S ribosomal protein S12; n=35; cellul... 41 0.019
UniRef50_Q1PPX2 Cluster: Em1-tg19B; n=1; Euplotes aediculatus|Re... 40 0.025
UniRef50_A5DX89 Cluster: 30S ribosomal protein S12; n=6; Sacchar... 40 0.034
UniRef50_Q05682 Cluster: Caldesmon; n=68; Tetrapoda|Rep: Caldesm... 36 0.41
UniRef50_A4S304 Cluster: VIC family transporter: sodium/calcium ... 36 0.55
UniRef50_UPI00015B40B9 Cluster: PREDICTED: similar to mitochondr... 35 0.96
UniRef50_UPI000049A59F Cluster: ankyrin repeat protein; n=1; Ent... 35 0.96
UniRef50_Q2H267 Cluster: Putative uncharacterized protein; n=1; ... 34 1.7
UniRef50_Q3WB12 Cluster: Putative uncharacterized protein; n=1; ... 34 2.2
UniRef50_Q6K6D7 Cluster: Cell wall protein-like; n=1; Oryza sati... 34 2.2
UniRef50_Q1HPJ4 Cluster: Mitochondrial ribosomal protein S12; n=... 34 2.2
UniRef50_Q9TMN0 Cluster: Apicoplast 30S ribosomal protein S12; n... 34 2.2
UniRef50_A7RV08 Cluster: Predicted protein; n=1; Nematostella ve... 33 2.9
UniRef50_Q2GWF5 Cluster: Putative uncharacterized protein; n=1; ... 33 2.9
UniRef50_UPI0000ECC754 Cluster: UPI0000ECC754 related cluster; n... 33 3.9
UniRef50_Q5XGT0 Cluster: LOC495149 protein; n=13; Eumetazoa|Rep:... 33 3.9
UniRef50_Q1LUE5 Cluster: Novel protein; n=5; Clupeocephala|Rep: ... 33 3.9
UniRef50_Q8CBJ2 Cluster: 16 days neonate cerebellum cDNA, RIKEN ... 33 3.9
UniRef50_P14149 Cluster: Chloroplast 30S ribosomal protein S12; ... 33 3.9
UniRef50_A4IG42 Cluster: Zgc:162193 protein; n=11; Clupeocephala... 33 5.1
UniRef50_O61646 Cluster: Splicing factor SRp54; n=8; Endopterygo... 33 5.1
UniRef50_Q6CAQ5 Cluster: Similar to tr|Q9P7X2 Schizosaccharomyce... 33 5.1
UniRef50_UPI0000D56039 Cluster: PREDICTED: similar to CG7358-PA;... 32 6.8
UniRef50_Q2G7F6 Cluster: Putative uncharacterized protein precur... 32 6.8
UniRef50_Q7RL71 Cluster: Drosophila melanogaster SD07741p; n=4; ... 32 6.8
UniRef50_A7AXG1 Cluster: Rps12; n=1; Babesia bovis|Rep: Rps12 - ... 32 6.8
UniRef50_Q2GNQ4 Cluster: Putative uncharacterized protein; n=1; ... 32 6.8
UniRef50_A5P549 Cluster: Putative uncharacterized protein precur... 32 8.9
UniRef50_A4XF13 Cluster: Transcriptional regulator, LysR family;... 32 8.9
UniRef50_A3IXB4 Cluster: Putative uncharacterized protein; n=1; ... 32 8.9
UniRef50_Q9VYK0 Cluster: CG4013-PA, isoform A; n=7; Coelomata|Re... 32 8.9
UniRef50_Q9NEH6 Cluster: EG:BACH59J11.1 protein; n=2; Bilateria|... 32 8.9
UniRef50_Q54D83 Cluster: Putative uncharacterized protein; n=2; ... 32 8.9
UniRef50_O44381 Cluster: Shar pei/DRhoGEF2; n=5; Drosophila mela... 32 8.9
UniRef50_Q5T200 Cluster: Zinc finger CCCH domain-containing prot... 32 8.9
UniRef50_P10735 Cluster: 40S ribosomal protein S12, mitochondria... 32 8.9
>UniRef50_P62266 Cluster: 40S ribosomal protein S23; n=141; cellular
organisms|Rep: 40S ribosomal protein S23 - Homo sapiens
(Human)
Length = 143
Score = 149 bits (362), Expect = 3e-35
Identities = 70/76 (92%), Positives = 73/76 (96%)
Frame = +2
Query: 257 RCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVAN 436
+CVRVQLIKNGKK+TAFVP DGCLN IEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVAN
Sbjct: 68 KCVRVQLIKNGKKITAFVPNDGCLNFIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVAN 127
Query: 437 VSLLALYKEQKERPRS 484
VSLLALYK +KERPRS
Sbjct: 128 VSLLALYKGKKERPRS 143
Score = 102 bits (245), Expect = 4e-21
Identities = 46/58 (79%), Positives = 52/58 (89%)
Frame = +3
Query: 75 RAARKHVNHRREQRWADKEFKKAHMGTRWKANPFGGASHAKGIVLEKVGVEAKQPNSA 248
R ARK +HRR+Q+W DK++KKAH+GT KANPFGGASHAKGIVLEKVGVEAKQPNSA
Sbjct: 8 RTARKLRSHRRDQKWHDKQYKKAHLGTALKANPFGGASHAKGIVLEKVGVEAKQPNSA 65
>UniRef50_P32827 Cluster: 40S ribosomal protein S23; n=66; cellular
organisms|Rep: 40S ribosomal protein S23 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 145
Score = 137 bits (331), Expect = 2e-31
Identities = 63/76 (82%), Positives = 71/76 (93%)
Frame = +2
Query: 257 RCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVAN 436
+CVRVQLIKNGKKVTAFVP DGCLN ++ENDEVL+AGFGRKG A GDIPGVRFKVVKV+
Sbjct: 70 KCVRVQLIKNGKKVTAFVPNDGCLNFVDENDEVLLAGFGRKGKAKGDIPGVRFKVVKVSG 129
Query: 437 VSLLALYKEQKERPRS 484
VSLLAL+KE+KE+PRS
Sbjct: 130 VSLLALWKEKKEKPRS 145
Score = 83.4 bits (197), Expect = 3e-15
Identities = 36/57 (63%), Positives = 47/57 (82%)
Frame = +3
Query: 78 AARKHVNHRREQRWADKEFKKAHMGTRWKANPFGGASHAKGIVLEKVGVEAKQPNSA 248
+ARK HRR RWA+ +KK +GT +K++PFGG+SHAKGIVLEK+G+E+KQPNSA
Sbjct: 11 SARKLRVHRRNNRWAENNYKKRLLGTAFKSSPFGGSSHAKGIVLEKLGIESKQPNSA 67
>UniRef50_Q5AAQ9 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 102
Score = 101 bits (243), Expect = 7e-21
Identities = 49/78 (62%), Positives = 57/78 (73%)
Frame = -3
Query: 486 YDLGLSFCSLYRARSDTFATLTTLNLTPGMSPTAWPLRPNPATNTSSFSSMWLRQPSRGT 307
YDLG SF S ++A +T TLTTLNLTPG+SP A PL P PA TSSFSS +QPS GT
Sbjct: 5 YDLGFSFFSFHKANKETPETLTTLNLTPGISPLALPLLPKPANKTSSFSSTKFKQPSFGT 64
Query: 306 NAVTFLPFLMSCTRTHLT 253
AVTFLPFL++ T TH +
Sbjct: 65 KAVTFLPFLINWTSTHFS 82
Score = 37.9 bits (84), Expect = 0.14
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = -2
Query: 271 YTDTPYEWAEFGCLASTPTFSRTMPLA 191
+T T + AEFGCL S P FS+T+PLA
Sbjct: 76 WTSTHFSIAEFGCLDSIPIFSKTIPLA 102
>UniRef50_Q8ZYQ4 Cluster: 30S ribosomal protein S12P; n=17;
Archaea|Rep: 30S ribosomal protein S12P - Pyrobaculum
aerophilum
Length = 147
Score = 97.9 bits (233), Expect = 1e-19
Identities = 45/75 (60%), Positives = 61/75 (81%), Gaps = 1/75 (1%)
Frame = +2
Query: 257 RCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGF-GRKGHAVGDIPGVRFKVVKVA 433
+CVRVQL+KNGK VTAFVP DG LN+I E+DEV++ G +G ++GDIPGVRFKV+KV
Sbjct: 71 KCVRVQLVKNGKVVTAFVPLDGSLNYINEHDEVVIERIGGPEGRSLGDIPGVRFKVIKVN 130
Query: 434 NVSLLALYKEQKERP 478
VSL A+++ +K++P
Sbjct: 131 GVSLWAIWRGKKQKP 145
Score = 55.6 bits (128), Expect = 6e-07
Identities = 30/66 (45%), Positives = 42/66 (63%)
Frame = +3
Query: 51 KRVRLGVFRAARKHVNHRREQRWADKEFKKAHMGTRWKANPFGGASHAKGIVLEKVGVEA 230
K+ G+F A K R++ RW D +K+ +G K +P GA A+GIVLEKVGVEA
Sbjct: 4 KKSPYGLF-AGGKLKRKRQKFRWNDVTYKRKMLGLVEKYDPLEGAPMARGIVLEKVGVEA 62
Query: 231 KQPNSA 248
++PN+A
Sbjct: 63 RKPNAA 68
>UniRef50_Q8S6I4 Cluster: Putative 40s ribosomal protein S23; n=4;
Oryza sativa|Rep: Putative 40s ribosomal protein S23 -
Oryza sativa (Rice)
Length = 301
Score = 91.1 bits (216), Expect = 1e-17
Identities = 40/57 (70%), Positives = 45/57 (78%)
Frame = +3
Query: 78 AARKHVNHRREQRWADKEFKKAHMGTRWKANPFGGASHAKGIVLEKVGVEAKQPNSA 248
A RK HRR QRWADK +KK+H G WK PF G+SHAKGIVLEK+G+EAKQPNSA
Sbjct: 80 AGRKLKTHRRNQRWADKAYKKSHFGNEWK-KPFAGSSHAKGIVLEKIGIEAKQPNSA 135
Score = 57.6 bits (133), Expect = 2e-07
Identities = 24/37 (64%), Positives = 28/37 (75%)
Frame = +2
Query: 245 SPFVRCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEV 355
S +C RVQL+KNGKK+ AFVP DGCLN I+EN V
Sbjct: 134 SAICKCARVQLVKNGKKIAAFVPNDGCLNFIKENGPV 170
>UniRef50_Q0W8G5 Cluster: 30S ribosomal protein S12P; n=20; cellular
organisms|Rep: 30S ribosomal protein S12P - Uncultured
methanogenic archaeon RC-I
Length = 142
Score = 88.6 bits (210), Expect = 7e-17
Identities = 39/75 (52%), Positives = 57/75 (76%), Gaps = 1/75 (1%)
Frame = +2
Query: 257 RCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGF-GRKGHAVGDIPGVRFKVVKVA 433
+C+R+QLIKNG+++TAF P DG +N I+E+DEV + G GR G + GDIPGVRF+V KV
Sbjct: 66 KCIRIQLIKNGRQITAFCPGDGAINFIDEHDEVTIEGIGGRMGGSYGDIPGVRFRVFKVN 125
Query: 434 NVSLLALYKEQKERP 478
+VSL + ++++P
Sbjct: 126 DVSLEEMVAGKRDKP 140
Score = 66.5 bits (155), Expect = 3e-10
Identities = 34/62 (54%), Positives = 44/62 (70%)
Frame = +3
Query: 63 LGVFRAARKHVNHRREQRWADKEFKKAHMGTRWKANPFGGASHAKGIVLEKVGVEAKQPN 242
+G F A RK V+ R+ RW+D+++ + + KA+P GA AKGIVLEKVGVEAKQPN
Sbjct: 3 IGKF-ACRKLVHDRKLYRWSDRDYARRVLRLDEKADPLEGAPQAKGIVLEKVGVEAKQPN 61
Query: 243 SA 248
SA
Sbjct: 62 SA 63
>UniRef50_Q8H6J0 Cluster: Putative 40S ribosomal protein; n=1; Zea
mays|Rep: Putative 40S ribosomal protein - Zea mays
(Maize)
Length = 309
Score = 88.2 bits (209), Expect = 1e-16
Identities = 40/46 (86%), Positives = 45/46 (97%)
Frame = +2
Query: 347 DEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKEQKERPRS 484
DEVL+AGFGRKGHAVGDIPGVRFKVVKV+ VSLLAL+KE+KE+PRS
Sbjct: 224 DEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS 269
>UniRef50_A3H7W0 Cluster: Protein splicing (Intein) site; n=4;
cellular organisms|Rep: Protein splicing (Intein) site -
Caldivirga maquilingensis IC-167
Length = 661
Score = 88.2 bits (209), Expect = 1e-16
Identities = 45/74 (60%), Positives = 54/74 (72%), Gaps = 1/74 (1%)
Frame = +2
Query: 260 CVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGF-GRKGHAVGDIPGVRFKVVKVAN 436
CVRVQL KNGK VTAFVP DG LN I E+DEV++ G +G A GD+PGVRFKV KV
Sbjct: 586 CVRVQLTKNGKVVTAFVPWDGGLNLINEHDEVIIERIGGPEGRAYGDLPGVRFKVTKVNG 645
Query: 437 VSLLALYKEQKERP 478
VSL A+ +K++P
Sbjct: 646 VSLKAILLGKKQKP 659
Score = 63.3 bits (147), Expect = 3e-09
Identities = 33/66 (50%), Positives = 47/66 (71%)
Frame = +3
Query: 51 KRVRLGVFRAARKHVNHRREQRWADKEFKKAHMGTRWKANPFGGASHAKGIVLEKVGVEA 230
K+ LG++ AARK R++ RW+D ++KK +G K +P GA A+GIVLEKVGVEA
Sbjct: 4 KKSPLGLY-AARKLRRKRQKFRWSDIQYKKRALGFIKKYDPLEGAPMARGIVLEKVGVEA 62
Query: 231 KQPNSA 248
++PN+A
Sbjct: 63 RKPNAA 68
>UniRef50_UPI00004CC6C0 Cluster: PREDICTED: hypothetical protein;
n=1; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 143
Score = 69.3 bits (162), Expect = 5e-11
Identities = 35/70 (50%), Positives = 48/70 (68%)
Frame = -2
Query: 472 LLLFFVQS*KRHVCYLNHLKSDSRNVTNSVAFTTESCN*HLIVLLNVVEATITRHECCHF 293
L F +QS +R++ Y NHLK DSR++T S+ F+T+S N +I+ LN V+A I HE C
Sbjct: 4 LAQFDLQSQQRNIGYFNHLKEDSRDITYSMTFSTKSSN-WIIIFLNEVQAAIIGHERCDL 62
Query: 292 LAVLNELYTD 263
L VLNEL+ D
Sbjct: 63 LPVLNELHPD 72
Score = 34.3 bits (75), Expect = 1.7
Identities = 22/67 (32%), Positives = 31/67 (46%)
Frame = -1
Query: 272 VHGHTLRMG*IRLLGFNANFFEDDALSMRCTTEGVRLPSRTHVGFFEFLVGPSLLATMIH 93
+H L G I L G N FF+ ++L MR + + L VGF V P L+ ++
Sbjct: 69 LHPDALPDGRIWLFGLNPYFFQHNSLCMRGAPKRIGLQGCAQVGFLVLFVMPLLVPSVTA 128
Query: 92 VLARRSE 72
L SE
Sbjct: 129 ELPGSSE 135
>UniRef50_A3B198 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 128
Score = 51.2 bits (117), Expect = 1e-05
Identities = 22/27 (81%), Positives = 25/27 (92%)
Frame = +2
Query: 347 DEVLVAGFGRKGHAVGDIPGVRFKVVK 427
DEVL++GFG KGHAVGDI GVRF+VVK
Sbjct: 67 DEVLISGFGHKGHAVGDIRGVRFEVVK 93
>UniRef50_Q8BGG2 Cluster: Adult male spinal cord cDNA, RIKEN
full-length enriched library, clone:A330001L23
product:hypothetical protein, full insert sequence; n=8;
Euarchontoglires|Rep: Adult male spinal cord cDNA, RIKEN
full-length enriched library, clone:A330001L23
product:hypothetical protein, full insert sequence - Mus
musculus (Mouse)
Length = 154
Score = 43.2 bits (97), Expect = 0.004
Identities = 20/41 (48%), Positives = 27/41 (65%)
Frame = -2
Query: 385 VAFTTESCN*HLIVLLNVVEATITRHECCHFLAVLNELYTD 263
+ F+T+S N + I+ LN V+A I HE C L VLNEL+ D
Sbjct: 1 MTFSTKSSNQNFIIFLNEVQAAIIGHERCDLLPVLNELHPD 41
Score = 36.3 bits (80), Expect = 0.41
Identities = 23/67 (34%), Positives = 32/67 (47%)
Frame = -1
Query: 272 VHGHTLRMG*IRLLGFNANFFEDDALSMRCTTEGVRLPSRTHVGFFEFLVGPSLLATMIH 93
+H L G I L G N FF+ ++L MR T + + L VGF V P L+ ++
Sbjct: 38 LHPDALPDGRIWLFGLNPYFFQHNSLCMRGTPKRIGLQGCAQVGFLVLFVMPLLVPSVTA 97
Query: 92 VLARRSE 72
L SE
Sbjct: 98 ELPGSSE 104
>UniRef50_Q7SZ18 Cluster: Mrps12-prov protein; n=8;
Euteleostomi|Rep: Mrps12-prov protein - Xenopus laevis
(African clawed frog)
Length = 150
Score = 41.5 bits (93), Expect = 0.011
Identities = 24/57 (42%), Positives = 39/57 (68%)
Frame = +2
Query: 257 RCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVK 427
+C RV+L NGK+V F+P +G ++++E++ VLV G GR D+PGV+ K+V+
Sbjct: 90 KCARVRL-SNGKEVICFIPGEG--HNLQEHNIVLVEG-GR----TQDLPGVKLKIVR 138
>UniRef50_Q5K6X0 Cluster: Ribosomal protein S12, putative; n=2;
Dikarya|Rep: Ribosomal protein S12, putative -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 176
Score = 41.5 bits (93), Expect = 0.011
Identities = 23/57 (40%), Positives = 38/57 (66%)
Frame = +2
Query: 257 RCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVK 427
+ RV+L NG+ TA++P +G ++++E+ VLV G G K D+PGVR+K+V+
Sbjct: 102 KVARVKL-SNGQMTTAYIPGEG--HNLQEHSVVLVRGGGAK-----DLPGVRYKIVR 150
>UniRef50_O70089 Cluster: 30S ribosomal protein S12; n=35; cellular
organisms|Rep: 30S ribosomal protein S12 - Aquifex
aeolicus
Length = 128
Score = 40.7 bits (91), Expect = 0.019
Identities = 25/59 (42%), Positives = 41/59 (69%)
Frame = +2
Query: 257 RCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVA 433
+ RV+L NG +VTA++P +G ++++E+ VLV G GR V D+PGVR+K+++ A
Sbjct: 51 KVARVRL-SNGIEVTAYIPGEG--HNLQEHSIVLVRG-GR----VKDLPGVRYKIIRGA 101
>UniRef50_Q1PPX2 Cluster: Em1-tg19B; n=1; Euplotes aediculatus|Rep:
Em1-tg19B - Euplotes aediculatus
Length = 139
Score = 40.3 bits (90), Expect = 0.025
Identities = 22/71 (30%), Positives = 45/71 (63%), Gaps = 2/71 (2%)
Frame = -2
Query: 469 LLFFV--QS*KRHVCYLNHLKSDSRNVTNSVAFTTESCN*HLIVLLNVVEATITRHECCH 296
L+FFV + R+ + L+ D+R++++SV+ ++E + + +V+ + T++ +E H
Sbjct: 15 LVFFVSPKCVNRNSGNFDDLEPDTRHISDSVSLSSEVLDENFVVIFCESKTTVSWNESSH 74
Query: 295 FLAVLNELYTD 263
FL VL EL++D
Sbjct: 75 FLVVLFELHSD 85
>UniRef50_A5DX89 Cluster: 30S ribosomal protein S12; n=6;
Saccharomycetales|Rep: 30S ribosomal protein S12 -
Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 183
Score = 39.9 bits (89), Expect = 0.034
Identities = 24/59 (40%), Positives = 40/59 (67%)
Frame = +2
Query: 257 RCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVA 433
+C RV+L NGK ++A +P +G ++++E+ VLV G GR V D+PGV++ +V+ A
Sbjct: 110 KCARVRL-SNGKVISALIPGEG--HNLQEHHVVLVRG-GR----VQDVPGVKYHLVRGA 160
>UniRef50_Q05682 Cluster: Caldesmon; n=68; Tetrapoda|Rep: Caldesmon
- Homo sapiens (Human)
Length = 793
Score = 36.3 bits (80), Expect = 0.41
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = +2
Query: 2 RERERERHIPRSRQRVEESETRSIQSGAQARESSSRAAMGRQGIQK 139
R RE E+ RQR++E E R+ + + +E RAA RQ I++
Sbjct: 316 RMREEEKRAAEERQRIKEEEKRAAEERQRIKEEEKRAAEERQRIKE 361
Score = 33.5 bits (73), Expect = 2.9
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +2
Query: 8 RERERHIPRSRQRVEESETRSIQSGAQARESSSRAAMGRQGIQK 139
+ERER R+R+ E E R+ + + +E RAA RQ I++
Sbjct: 304 QERERREAEERERMREEEKRAAEERQRIKEEEKRAAEERQRIKE 347
Score = 33.1 bits (72), Expect = 3.9
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +2
Query: 2 RERERERHIPRSRQRVEESETRSIQSGAQARESSSRAAMGRQ 127
R +E E+ RQR++E E R+ + + +E RAA RQ
Sbjct: 330 RIKEEEKRAAEERQRIKEEEKRAAEERQRIKEEEKRAAEERQ 371
>UniRef50_A4S304 Cluster: VIC family transporter: sodium/calcium ion
channel; n=1; Ostreococcus lucimarinus CCE9901|Rep: VIC
family transporter: sodium/calcium ion channel -
Ostreococcus lucimarinus CCE9901
Length = 1012
Score = 35.9 bits (79), Expect = 0.55
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +2
Query: 2 RERERERHIPRSRQRVEESETRSIQSGAQARESSSRA-AMGRQGIQKSPHGYEMEG 166
RERERER R R+R ESE+ S + + S+ R G + Y++EG
Sbjct: 77 RERERERERERERERESESESESDSASTSTSDGSTTTDGETRAGAAPATEEYDVEG 132
>UniRef50_UPI00015B40B9 Cluster: PREDICTED: similar to mitochondrial
ribosomal protein S12; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to mitochondrial ribosomal protein
S12 - Nasonia vitripennis
Length = 173
Score = 35.1 bits (77), Expect = 0.96
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = +3
Query: 156 RWKANPFGGASHAKGIVLEKVGVEAKQPNSAH 251
R NPF GA AKG+VL+ + + K+PNSA+
Sbjct: 79 RKSKNPFNGAPFAKGVVLKTLIKKPKKPNSAN 110
Score = 33.9 bits (74), Expect = 2.2
Identities = 22/57 (38%), Positives = 37/57 (64%)
Frame = +2
Query: 257 RCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVK 427
+CV V+L NGK++TA++P G ++++E++ VL R G D+PGV+ K V+
Sbjct: 112 KCVLVRL-SNGKEMTAYIP--GIGHNLQEHNIVLC----RVGRC-RDVPGVKIKCVR 160
>UniRef50_UPI000049A59F Cluster: ankyrin repeat protein; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: ankyrin repeat
protein - Entamoeba histolytica HM-1:IMSS
Length = 681
Score = 35.1 bits (77), Expect = 0.96
Identities = 22/69 (31%), Positives = 40/69 (57%)
Frame = +2
Query: 278 IKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALY 457
IK + V+ F+P + L ++ N+ V V +KG AVG I G R+ + +A +++ L
Sbjct: 544 IKKVRMVSDFMPEEEELLRLKSNEIVEVYWEHKKGWAVGGING-RYGMFPLAKGTIIPLS 602
Query: 458 KEQKERPRS 484
KE++++ S
Sbjct: 603 KEEQDKINS 611
>UniRef50_Q2H267 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 141
Score = 34.3 bits (75), Expect = 1.7
Identities = 23/59 (38%), Positives = 37/59 (62%)
Frame = +2
Query: 257 RCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVA 433
+ RV+L GK +TA++P +G ++I+++ VLV G GR D PGVR+ +V+ A
Sbjct: 64 KTARVRL-STGKVITAYIPGEG--HNIQQHSVVLVRG-GRS----QDCPGVRYHLVRGA 114
>UniRef50_Q3WB12 Cluster: Putative uncharacterized protein; n=1;
Frankia sp. EAN1pec|Rep: Putative uncharacterized
protein - Frankia sp. EAN1pec
Length = 496
Score = 33.9 bits (74), Expect = 2.2
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = -3
Query: 477 GLSFCSLYRARSDTFATLTTLNLTPGM-SPTAWPLRPNPATNTSS 346
GL +CS +R+ AT + PG SP AWP P + TSS
Sbjct: 287 GLPYCSGCASRTCGSATFVAIRSVPGTPSPAAWPASPWRSAGTSS 331
>UniRef50_Q6K6D7 Cluster: Cell wall protein-like; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Cell wall protein-like -
Oryza sativa subsp. japonica (Rice)
Length = 398
Score = 33.9 bits (74), Expect = 2.2
Identities = 19/40 (47%), Positives = 27/40 (67%), Gaps = 2/40 (5%)
Frame = -3
Query: 474 LSFCSLYR-ARSDTFATLTTLNLTPGMSPTAW-PLRPNPA 361
++F SL+R AR+ T++T +T SP+A PLRPNPA
Sbjct: 187 VAFGSLFRRARAPADVTISTSGITAARSPSASPPLRPNPA 226
>UniRef50_Q1HPJ4 Cluster: Mitochondrial ribosomal protein S12; n=3;
Coelomata|Rep: Mitochondrial ribosomal protein S12 -
Bombyx mori (Silk moth)
Length = 111
Score = 33.9 bits (74), Expect = 2.2
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +3
Query: 144 HMGTRWKANPFGGASHAKGIVLEKVGVEAKQPNSAH 251
H+ R NP G AKG+VL+ V + K+PNSA+
Sbjct: 13 HIKKRKSRNPLNGNPFAKGVVLKTVIKKPKKPNSAN 48
>UniRef50_Q9TMN0 Cluster: Apicoplast 30S ribosomal protein S12; n=3;
Eukaryota|Rep: Apicoplast 30S ribosomal protein S12 -
Toxoplasma gondii
Length = 121
Score = 33.9 bits (74), Expect = 2.2
Identities = 16/50 (32%), Positives = 36/50 (72%)
Frame = +2
Query: 278 IKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVK 427
+KN K++ A++P +G + +++++ VL+ +KG V D+PG+++KV++
Sbjct: 55 LKNKKEILAYIPGEG--HALQDHNFVLI----KKGR-VQDLPGIKYKVIR 97
>UniRef50_A7RV08 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 864
Score = 33.5 bits (73), Expect = 2.9
Identities = 23/64 (35%), Positives = 34/64 (53%)
Frame = +2
Query: 2 RERERERHIPRSRQRVEESETRSIQSGAQARESSSRAAMGRQGIQKSPHGYEMEGEPLRW 181
R+R R R RSR+RVE S++RS + +AR + R R+ K H Y ++ E
Sbjct: 512 RDRSRSRESQRSRERVERSQSRSCEY-HKARRAKERERR-RKMKGKEKHVY-IDSEDSYH 568
Query: 182 CISC 193
C +C
Sbjct: 569 CHAC 572
>UniRef50_Q2GWF5 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 659
Score = 33.5 bits (73), Expect = 2.9
Identities = 21/48 (43%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Frame = -3
Query: 453 RARSDTFATLTTLNLT-PGMSPTAWPLRPNPA-TNTSSFSSMWLRQPS 316
R+ S T + L+LT P + P+A+PLRP PA T T +F L PS
Sbjct: 180 RSASTTSRSTNRLSLTLPIVPPSAYPLRPTPASTTTPAFPPTPLDTPS 227
>UniRef50_UPI0000ECC754 Cluster: UPI0000ECC754 related cluster; n=1;
Gallus gallus|Rep: UPI0000ECC754 UniRef100 entry -
Gallus gallus
Length = 161
Score = 33.1 bits (72), Expect = 3.9
Identities = 22/79 (27%), Positives = 38/79 (48%)
Frame = +2
Query: 2 RERERERHIPRSRQRVEESETRSIQSGAQARESSSRAAMGRQGIQKSPHGYEMEGEPLRW 181
+ER+RER R R+R +E + + + RE + +Q K HG ++ + R
Sbjct: 84 KERKREREKERKREREKERKREREKERKREREKERKKKQQQQKACKKVHGKSLDRKSPR- 142
Query: 182 CISC*GHRPRKSWR*SQAA 238
G RP+ ++R S A+
Sbjct: 143 --KKYGRRPQYNYRKSDAS 159
>UniRef50_Q5XGT0 Cluster: LOC495149 protein; n=13; Eumetazoa|Rep:
LOC495149 protein - Xenopus laevis (African clawed frog)
Length = 1029
Score = 33.1 bits (72), Expect = 3.9
Identities = 18/52 (34%), Positives = 23/52 (44%)
Frame = +2
Query: 2 RERERERHIPRSRQRVEESETRSIQSGAQARESSSRAAMGRQGIQKSPHGYE 157
RERERER R R R E E + + RE GR+ + P +E
Sbjct: 780 RERERERERERERDRERERERERERERERDREKEKERERGRERDRDRPRDWE 831
>UniRef50_Q1LUE5 Cluster: Novel protein; n=5; Clupeocephala|Rep:
Novel protein - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 1148
Score = 33.1 bits (72), Expect = 3.9
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Frame = +2
Query: 2 RERERERHIPRSRQRVEESETRSIQSG--AQARESSSRAAMGRQGIQKS 142
R++ER++H P R+ V S + S SG +++R SS A+ R G KS
Sbjct: 832 RKKERQQHNPPRRRTVSGSVSGSSYSGSSSRSRSRSSSASASRSGSHKS 880
>UniRef50_Q8CBJ2 Cluster: 16 days neonate cerebellum cDNA, RIKEN
full-length enriched library, clone:9630015E22
product:hypothetical Leucine-rich region containing
protein, full insert sequence; n=1; Mus musculus|Rep: 16
days neonate cerebellum cDNA, RIKEN full-length enriched
library, clone:9630015E22 product:hypothetical
Leucine-rich region containing protein, full insert
sequence - Mus musculus (Mouse)
Length = 142
Score = 33.1 bits (72), Expect = 3.9
Identities = 16/23 (69%), Positives = 19/23 (82%)
Frame = -3
Query: 69 LRVSLSSTLCLDLGMCLSLSLSL 1
L +SLS +LCL L +CLSLSLSL
Sbjct: 65 LSLSLSLSLCLCLSLCLSLSLSL 87
>UniRef50_P14149 Cluster: Chloroplast 30S ribosomal protein S12;
n=5; cellular organisms|Rep: Chloroplast 30S ribosomal
protein S12 - Chlamydomonas reinhardtii
Length = 133
Score = 33.1 bits (72), Expect = 3.9
Identities = 23/57 (40%), Positives = 37/57 (64%)
Frame = +2
Query: 257 RCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVK 427
+ RV+L G +VTA++P G ++++E+ VLV G GR V D+PGVR+ +V+
Sbjct: 51 KVARVRLT-TGFEVTAYIPGVG--HNLQEHAVVLVRG-GR----VKDLPGVRYHIVR 99
>UniRef50_A4IG42 Cluster: Zgc:162193 protein; n=11;
Clupeocephala|Rep: Zgc:162193 protein - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 912
Score = 32.7 bits (71), Expect = 5.1
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = -3
Query: 444 SDTFATLTTLNLTPGMSPTAWPLRPNPATNTSSFSSMWLRQP 319
+ TF+ + LNL+P WP++PN N S + W P
Sbjct: 867 AQTFSKVVNLNLSPFFKAWGWPIQPNTEQNLSHLPA-WSDHP 907
>UniRef50_O61646 Cluster: Splicing factor SRp54; n=8;
Endopterygota|Rep: Splicing factor SRp54 - Drosophila
melanogaster (Fruit fly)
Length = 513
Score = 32.7 bits (71), Expect = 5.1
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = +2
Query: 2 RERERERHIPRSRQRVEESETRSIQSGAQARESSSRAAMGR 124
R R R+R RSR S RS +SG++ R S SR+ R
Sbjct: 290 RSRSRDRRTSRSRSHRSTSRRRSRRSGSRERRSVSRSRRSR 330
>UniRef50_Q6CAQ5 Cluster: Similar to tr|Q9P7X2 Schizosaccharomyces
pombe Hypothetical coiled- coil protein; n=1; Yarrowia
lipolytica|Rep: Similar to tr|Q9P7X2 Schizosaccharomyces
pombe Hypothetical coiled- coil protein - Yarrowia
lipolytica (Candida lipolytica)
Length = 525
Score = 32.7 bits (71), Expect = 5.1
Identities = 18/38 (47%), Positives = 25/38 (65%)
Frame = +2
Query: 2 RERERERHIPRSRQRVEESETRSIQSGAQARESSSRAA 115
RERERER R R+RVE+ +S + +RESSS ++
Sbjct: 261 RERERERERERERERVEKE--KSDRDSRTSRESSSSSS 296
>UniRef50_UPI0000D56039 Cluster: PREDICTED: similar to CG7358-PA;
n=2; Coelomata|Rep: PREDICTED: similar to CG7358-PA -
Tribolium castaneum
Length = 1031
Score = 32.3 bits (70), Expect = 6.8
Identities = 16/59 (27%), Positives = 31/59 (52%)
Frame = +2
Query: 2 RERERERHIPRSRQRVEESETRSIQSGAQARESSSRAAMGRQGIQKSPHGYEMEGEPLR 178
+ERERE+ R+++ E+ + + +S + R+S S ++ S H + +G P R
Sbjct: 305 KEREREKEKERNKKDREKDDHKKKESRSPKRDSRSTKDTKKRDTPDSSHSRDKKGSPSR 363
>UniRef50_Q2G7F6 Cluster: Putative uncharacterized protein
precursor; n=2; Proteobacteria|Rep: Putative
uncharacterized protein precursor - Novosphingobium
aromaticivorans (strain DSM 12444)
Length = 339
Score = 32.3 bits (70), Expect = 6.8
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = -3
Query: 441 DTFATLTTLNLTPGMSPTAWPLRPNPATNTSSFSSMWLRQPSRGTNAVTF 292
D+ +T TT+ TP +PTA P P P +++S+ + P GT T+
Sbjct: 31 DSSSTATTVTPTPSPTPTATP-TPTPTATGTAYSTASVDCPYSGTYTGTY 79
>UniRef50_Q7RL71 Cluster: Drosophila melanogaster SD07741p; n=4;
Plasmodium (Vinckeia)|Rep: Drosophila melanogaster
SD07741p - Plasmodium yoelii yoelii
Length = 931
Score = 32.3 bits (70), Expect = 6.8
Identities = 15/56 (26%), Positives = 24/56 (42%)
Frame = +2
Query: 5 ERERERHIPRSRQRVEESETRSIQSGAQARESSSRAAMGRQGIQKSPHGYEMEGEP 172
+R+R R I R R R ESE+ + + + E+ S + + H Y P
Sbjct: 828 DRDRNREIDRDRNREMESESSTTRKRSHGNENDSNHNKNSNSVLRKVHDYNSSEHP 883
>UniRef50_A7AXG1 Cluster: Rps12; n=1; Babesia bovis|Rep: Rps12 -
Babesia bovis
Length = 123
Score = 32.3 bits (70), Expect = 6.8
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +2
Query: 284 NGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVV 424
N K V A+VP + + I +N VL+ KG V D+PGV++KV+
Sbjct: 58 NKKTVLAYVPGENVI--IPKNSRVLI-----KGGNVPDLPGVKYKVI 97
>UniRef50_Q2GNQ4 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 645
Score = 32.3 bits (70), Expect = 6.8
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 10/58 (17%)
Frame = +2
Query: 2 RERERERHIPRSRQRVEESETRSIQSGAQARE------SSSRAAM----GRQGIQKSP 145
R+RER+R R R+R E+ R +SG + RE SSS A G G++K P
Sbjct: 549 RDRERDRERDREREREREARLRGRESGREQRERPRERRSSSAAGFPERRGSSGMRKPP 606
>UniRef50_A5P549 Cluster: Putative uncharacterized protein
precursor; n=2; Alphaproteobacteria|Rep: Putative
uncharacterized protein precursor - Methylobacterium sp.
4-46
Length = 574
Score = 31.9 bits (69), Expect = 8.9
Identities = 13/53 (24%), Positives = 29/53 (54%)
Frame = +2
Query: 8 RERERHIPRSRQRVEESETRSIQSGAQARESSSRAAMGRQGIQKSPHGYEMEG 166
++R++H R+ QRV+E R + A ++ + + G+++ +E+EG
Sbjct: 322 QDRQQHQHRAEQRVQEELERGVDPALAAPDTDDQEHRDQAGLEEQVEQHEVEG 374
>UniRef50_A4XF13 Cluster: Transcriptional regulator, LysR family;
n=1; Novosphingobium aromaticivorans DSM 12444|Rep:
Transcriptional regulator, LysR family - Novosphingobium
aromaticivorans (strain DSM 12444)
Length = 315
Score = 31.9 bits (69), Expect = 8.9
Identities = 18/51 (35%), Positives = 23/51 (45%)
Frame = +3
Query: 84 RKHVNHRREQRWADKEFKKAHMGTRWKANPFGGASHAKGIVLEKVGVEAKQ 236
R+H + W EF A G W ANP G A+ A G+V + KQ
Sbjct: 193 RRHAGALQSLGWG-YEFDAALPGGPWSANPAGEAAQAAGLVTFNAWPQLKQ 242
>UniRef50_A3IXB4 Cluster: Putative uncharacterized protein; n=1;
Cyanothece sp. CCY 0110|Rep: Putative uncharacterized
protein - Cyanothece sp. CCY 0110
Length = 617
Score = 31.9 bits (69), Expect = 8.9
Identities = 16/36 (44%), Positives = 18/36 (50%)
Frame = -2
Query: 355 HLIVLLNVVEATITRHECCHFLAVLNELYTDTPYEW 248
H+IV NV +T H C FL L LY YEW
Sbjct: 376 HMIVSRNVSRSTPRPHPLCVFLDELPTLYLPQLYEW 411
>UniRef50_Q9VYK0 Cluster: CG4013-PA, isoform A; n=7; Coelomata|Rep:
CG4013-PA, isoform A - Drosophila melanogaster (Fruit
fly)
Length = 3604
Score = 31.9 bits (69), Expect = 8.9
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = +2
Query: 2 RERERERHIPRSRQRVEESETRSIQSGAQARESSSR 109
RERERER R R+R + R+ + A+ RE SR
Sbjct: 2885 RERERERERERERERERREQDRARRVVAEEREHDSR 2920
>UniRef50_Q9NEH6 Cluster: EG:BACH59J11.1 protein; n=2;
Bilateria|Rep: EG:BACH59J11.1 protein - Drosophila
melanogaster (Fruit fly)
Length = 154
Score = 31.9 bits (69), Expect = 8.9
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +3
Query: 144 HMGTRWKANPFGGASHAKGIVLEKVGVEAKQPNSAH 251
H+ TR P G AKG+VL+ + + K+PNSA+
Sbjct: 56 HIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSAN 91
>UniRef50_Q54D83 Cluster: Putative uncharacterized protein; n=2;
Eukaryota|Rep: Putative uncharacterized protein -
Dictyostelium discoideum AX4
Length = 988
Score = 31.9 bits (69), Expect = 8.9
Identities = 16/54 (29%), Positives = 29/54 (53%)
Frame = +2
Query: 2 RERERERHIPRSRQRVEESETRSIQSGAQARESSSRAAMGRQGIQKSPHGYEME 163
RE+ERE+ R ++R E E R+++S + RE + ++ QK H + +
Sbjct: 761 REKEREKEREREKERERERERRAMESELEEREREREKHVNKK--QKHTHKQQQQ 812
>UniRef50_O44381 Cluster: Shar pei/DRhoGEF2; n=5; Drosophila
melanogaster|Rep: Shar pei/DRhoGEF2 - Drosophila
melanogaster (Fruit fly)
Length = 2559
Score = 31.9 bits (69), Expect = 8.9
Identities = 23/47 (48%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Frame = -3
Query: 432 ATLTTLNLTPGMSPTAWPLRPNPATNTSSFSSM---WLRQPSRGTNA 301
ATLTT L P M P A + P PATN S+ SS+ LR P R A
Sbjct: 1925 ATLTTTPLAP-MLPIA-TVTPAPATNNSNVSSLTGVQLRNPQRDATA 1969
>UniRef50_Q5T200 Cluster: Zinc finger CCCH domain-containing protein
13; n=32; cellular organisms|Rep: Zinc finger CCCH
domain-containing protein 13 - Homo sapiens (Human)
Length = 1668
Score = 31.9 bits (69), Expect = 8.9
Identities = 19/56 (33%), Positives = 24/56 (42%)
Frame = +2
Query: 2 RERERERHIPRSRQRVEESETRSIQSGAQARESSSRAAMGRQGIQKSPHGYEMEGE 169
R+RERER R R R E E + A+ RE R+ + H E E E
Sbjct: 685 RDRERERERERERDREREKERELERERAREREREREKERDRERDRDRDHDRERERE 740
>UniRef50_P10735 Cluster: 40S ribosomal protein S12, mitochondrial
precursor; n=7; Coelomata|Rep: 40S ribosomal protein
S12, mitochondrial precursor - Drosophila melanogaster
(Fruit fly)
Length = 140
Score = 31.9 bits (69), Expect = 8.9
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +3
Query: 144 HMGTRWKANPFGGASHAKGIVLEKVGVEAKQPNSAH 251
H+ TR P G AKG+VL+ + + K+PNSA+
Sbjct: 42 HIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSAN 77
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 518,144,163
Number of Sequences: 1657284
Number of extensions: 10682290
Number of successful extensions: 36684
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 31490
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34958
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 31782822356
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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