Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_B08
         (515 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    25   0.30 
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   2.1  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    22   2.8  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   6.5  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   6.5  

>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 25.4 bits (53), Expect = 0.30
 Identities = 13/33 (39%), Positives = 16/33 (48%)
 Frame = -3

Query: 444 SDTFATLTTLNLTPGMSPTAWPLRPNPATNTSS 346
           +DT+ TL T  L  G     WP +P   T  SS
Sbjct: 52  TDTYPTLETCRLVCGKYGALWP-QPTSVTKISS 83


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = +2

Query: 380 GHAVGDIPGVR 412
           G AVGD+PG+R
Sbjct: 62  GTAVGDVPGLR 72


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 13/28 (46%), Positives = 15/28 (53%)
 Frame = -3

Query: 303 AVTFLPFLMSCTRTHLTNGLNSAAWLQR 220
           AVT    L +CTRT L N   S   +QR
Sbjct: 245 AVTATVQLSTCTRTTLKNNRASPYPMQR 272


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +1

Query: 340 GER*GVSCRIRS*RPRCW 393
           GE   V+C+  + +P CW
Sbjct: 869 GEYKCVTCKCENGKPTCW 886


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 14/51 (27%), Positives = 20/51 (39%)
 Frame = -3

Query: 381 PLRPNPATNTSSFSSMWLRQPSRGTNAVTFLPFLMSCTRTHLTNGLNSAAW 229
           P    PA     FS+  + +P  G  A   LP  +     +   G+N A W
Sbjct: 16  PYDATPARIVCYFSNWAIYRPGIGRYAQEDLPVDLCTHIVYSFIGVNDADW 66


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,171
Number of Sequences: 336
Number of extensions: 2570
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)