Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_B08
(515 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_33031| Best HMM Match : Ribosomal_S12 (HMM E-Value=0) 149 1e-36
SB_37381| Best HMM Match : Ribosomal_S12 (HMM E-Value=0) 103 7e-23
SB_19464| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.080
SB_25447| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.14
SB_22653| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.24
SB_48550| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.74
SB_49238| Best HMM Match : Metallothionein (HMM E-Value=2.8) 30 0.98
SB_21400| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.98
SB_46453| Best HMM Match : DUF947 (HMM E-Value=0.13) 30 0.98
SB_58981| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_38792| Best HMM Match : 7tm_2 (HMM E-Value=2e-13) 29 2.3
SB_9094| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_2709| Best HMM Match : SBP (HMM E-Value=0.83) 29 3.0
SB_41748| Best HMM Match : Transposase_14 (HMM E-Value=0.79) 29 3.0
SB_22759| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.0
SB_34124| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_25657| Best HMM Match : Glyco_hydro_18 (HMM E-Value=0) 28 5.3
SB_22220| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.9
SB_57969| Best HMM Match : zf-CCHC (HMM E-Value=0.0097) 27 9.2
SB_41214| Best HMM Match : Gag_spuma (HMM E-Value=2) 27 9.2
SB_33562| Best HMM Match : ATP-synt_8 (HMM E-Value=0.37) 27 9.2
SB_27475| Best HMM Match : PCMT (HMM E-Value=5.5) 27 9.2
>SB_33031| Best HMM Match : Ribosomal_S12 (HMM E-Value=0)
Length = 143
Score = 149 bits (361), Expect = 1e-36
Identities = 67/76 (88%), Positives = 75/76 (98%)
Frame = +2
Query: 257 RCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVAN 436
+CVRVQLIKNGKK+TAFVP DGCLN+IEENDEVL++GFGR+GHAVGDIPGVRFKVVKVAN
Sbjct: 68 KCVRVQLIKNGKKITAFVPNDGCLNYIEENDEVLISGFGRRGHAVGDIPGVRFKVVKVAN 127
Query: 437 VSLLALYKEQKERPRS 484
VSLLAL+KE+KERPRS
Sbjct: 128 VSLLALFKEKKERPRS 143
>SB_37381| Best HMM Match : Ribosomal_S12 (HMM E-Value=0)
Length = 413
Score = 103 bits (248), Expect = 7e-23
Identities = 43/51 (84%), Positives = 50/51 (98%)
Frame = +2
Query: 257 RCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGV 409
+CVRVQLIKNGKK+TAFVP DGCLN+IEENDEVL++GFGR+GHAVGDIPG+
Sbjct: 67 KCVRVQLIKNGKKITAFVPNDGCLNYIEENDEVLISGFGRRGHAVGDIPGI 117
Score = 101 bits (242), Expect = 4e-22
Identities = 46/58 (79%), Positives = 51/58 (87%)
Frame = +3
Query: 75 RAARKHVNHRREQRWADKEFKKAHMGTRWKANPFGGASHAKGIVLEKVGVEAKQPNSA 248
R ARK +HRR+Q+W DK +KKAH+GT KANPFGGASHAKGIVLEKVGVEAKQPNSA
Sbjct: 7 RTARKLRSHRRDQKWHDKAYKKAHLGTALKANPFGGASHAKGIVLEKVGVEAKQPNSA 64
>SB_19464| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1653
Score = 33.9 bits (74), Expect = 0.080
Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Frame = +2
Query: 2 RERERERHIPRSRQRVEESETRSIQSGAQARESSSRAAMG----RQGIQKSPHGYEMEGE 169
RER R R PRSR+R + + R + G++ R R G R ++S E +GE
Sbjct: 612 RERPRSRERPRSRERSDRRDERPQRRGSRGRSPGRREREGERRPRSAERQSRRQDEPKGE 671
Query: 170 P 172
P
Sbjct: 672 P 672
>SB_25447| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 752
Score = 33.1 bits (72), Expect = 0.14
Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
Frame = +2
Query: 2 RERERERHIPRSRQRVEESET--RSIQSGAQARESSSRAAMGRQGIQKSPHGYEMEGE-P 172
RE +R R P+ +RV + ++ G + E + +++SP GYE E P
Sbjct: 435 RESKRVRESPKGYERVRQGTRGYERVREGTRGYERVREGTRESERVRESPRGYEWVRESP 494
Query: 173 LRWC 184
WC
Sbjct: 495 RGWC 498
Score = 32.7 bits (71), Expect = 0.18
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Frame = +2
Query: 2 RERERERHIPRSRQRVEES--ETRSIQSGAQARESSSRAAMGRQGIQKSPHGYEMEGEPL 175
RE ER R PR +RV E E+ ++ G + + + G + +++ GYE E
Sbjct: 405 RESERVRESPRGSERVREGKRESERVREGKRESKRVRESPKGYERVRQGTRGYERVREGT 464
Query: 176 R 178
R
Sbjct: 465 R 465
Score = 31.1 bits (67), Expect = 0.56
Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Frame = +2
Query: 2 RERERERHIPRSRQRVEES--ETRSIQSGAQARESSSRAAMGRQGIQKSPHGYEMEGEPL 175
+E E+ R P +RV ES E+ ++ + E + + +++SP GYE E
Sbjct: 298 KESEKVREGPTESERVRESPRESERVRKSPRGSERARKGTRESDRVRESPKGYERVREGT 357
Query: 176 R 178
R
Sbjct: 358 R 358
Score = 29.9 bits (64), Expect = 1.3
Identities = 30/92 (32%), Positives = 40/92 (43%), Gaps = 1/92 (1%)
Frame = +2
Query: 2 RERERERHIPRSRQRVEESETRSIQSGAQARESSSRAAMGRQGIQKSPHGYEMEGEPLRW 181
RE ER R PR +RV E S++ + RES + R+ ++S E E R
Sbjct: 164 RESERVRESPRGSERVRE----SLREAERVRESPRESERVRERPRESERVRESPRESERV 219
Query: 182 CISC*GH-RPRKSWR*SQAAEFSPFVRCVRVQ 274
S G+ R RK R S SP RV+
Sbjct: 220 RKSPRGYERARKGTRESDRVRESPKGESERVR 251
>SB_22653| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 737
Score = 32.3 bits (70), Expect = 0.24
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Frame = +2
Query: 2 RERERERHIPRSRQRVEESETRSIQ--SGAQARESSSRAAM 118
R+R R R RSR+RVE S++RS + +A+E R M
Sbjct: 361 RDRSRSRESQRSRERVERSQSRSCEYHKARRAKERERRRKM 401
>SB_48550| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 595
Score = 30.7 bits (66), Expect = 0.74
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = +2
Query: 35 SRQRVEESETRSIQSGAQARESSSRAAMGRQGIQKSPHG 151
SRQ E ++ R I G QARE++ R MGRQ + + G
Sbjct: 187 SRQARENTDRRVI--GRQARENTDRRVMGRQAHENTGRG 223
Score = 27.9 bits (59), Expect = 5.3
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = +2
Query: 8 RERERHIPRSRQRVEESETRSIQSGAQARESSSRAAMGRQ 127
RE RQ E ++ R I G QARE++ R MGRQ
Sbjct: 397 RENTDRRVMGRQARENTDRRVI--GRQARENTDRRVMGRQ 434
Score = 27.5 bits (58), Expect = 6.9
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +2
Query: 80 GAQARESSSRAAMGRQGIQKS 142
G QARE++ R AM RQG++ +
Sbjct: 2 GRQARENTFRRAMSRQGLENT 22
Score = 27.5 bits (58), Expect = 6.9
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +2
Query: 80 GAQARESSSRAAMGRQGIQKS 142
G QARE++ R AM RQG++ +
Sbjct: 281 GRQARENTFRRAMSRQGLENT 301
Score = 27.5 bits (58), Expect = 6.9
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +2
Query: 41 QRVEESETRSIQSGAQARESSSRAAMGRQ 127
Q E ++ RS +G QAR+ + R AMG Q
Sbjct: 480 QARENTDRRSASNGKQARKHTDRRAMGIQ 508
>SB_49238| Best HMM Match : Metallothionein (HMM E-Value=2.8)
Length = 293
Score = 30.3 bits (65), Expect = 0.98
Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 6/62 (9%)
Frame = -3
Query: 393 PTAWPLRPNPATNTSSFSSMWLRQPSRGTNA-VTFLPFLMSCTRTHLT-----NGLNSAA 232
P W PN T S WL QP++GT+A VT+L T +T N +NS
Sbjct: 138 PCTWLAPPNKGT---SAPVTWLAQPNKGTSAPVTWLAPPNKGTSAIITWLTPPNMMNSVT 194
Query: 231 WL 226
WL
Sbjct: 195 WL 196
>SB_21400| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1531
Score = 30.3 bits (65), Expect = 0.98
Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Frame = +2
Query: 2 RERERERHIPRSRQRV--EESETRSIQSGAQARESSSRAAMGRQGIQKSPHGYEMEGEPL 175
R +R++ P+ V EES T +++ +A+++++ G +G P +EG+ L
Sbjct: 1425 RRTKRDQTPPQKEAAVSSEESGTETLKEQLEAKKAAAGLTRGSEGTPLDPSKCSLEGDQL 1484
Query: 176 RWCISC 193
C C
Sbjct: 1485 --CFGC 1488
>SB_46453| Best HMM Match : DUF947 (HMM E-Value=0.13)
Length = 943
Score = 30.3 bits (65), Expect = 0.98
Identities = 14/26 (53%), Positives = 19/26 (73%), Gaps = 2/26 (7%)
Frame = -2
Query: 184 APPKGFAFHLVPMW-AFLN-SLSAHR 113
APPKG+ F +VP+W +F N S+ HR
Sbjct: 911 APPKGYRFLIVPLWRSFSNRSVFGHR 936
>SB_58981| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 794
Score = 29.9 bits (64), Expect = 1.3
Identities = 20/64 (31%), Positives = 27/64 (42%)
Frame = +2
Query: 2 RERERERHIPRSRQRVEESETRSIQSGAQARESSSRAAMGRQGIQKSPHGYEMEGEPLRW 181
RERERER R R+R E E + + RE R+ ++ E E E R
Sbjct: 216 RERERERERERERERERERERERERERERERERERERERERERERERERERERERERERK 275
Query: 182 CISC 193
+C
Sbjct: 276 RYAC 279
Score = 29.5 bits (63), Expect = 1.7
Identities = 16/48 (33%), Positives = 21/48 (43%)
Frame = +2
Query: 2 RERERERHIPRSRQRVEESETRSIQSGAQARESSSRAAMGRQGIQKSP 145
RERERER R R+R E E + + RE A + + P
Sbjct: 242 RERERERERERERERERERERERERERERERERKRYACVSETSTRGEP 289
Score = 28.7 bits (61), Expect = 3.0
Identities = 18/56 (32%), Positives = 24/56 (42%)
Frame = +2
Query: 2 RERERERHIPRSRQRVEESETRSIQSGAQARESSSRAAMGRQGIQKSPHGYEMEGE 169
RERERER R R+R E E + + RE R+ ++ E E E
Sbjct: 212 RERERERERERERERERERERERERERERERERERERERERERERERERERERERE 267
Score = 28.7 bits (61), Expect = 3.0
Identities = 18/56 (32%), Positives = 24/56 (42%)
Frame = +2
Query: 2 RERERERHIPRSRQRVEESETRSIQSGAQARESSSRAAMGRQGIQKSPHGYEMEGE 169
RERERER R R+R E E + + RE R+ ++ E E E
Sbjct: 214 RERERERERERERERERERERERERERERERERERERERERERERERERERERERE 269
Score = 27.5 bits (58), Expect = 6.9
Identities = 17/56 (30%), Positives = 24/56 (42%)
Frame = +2
Query: 2 RERERERHIPRSRQRVEESETRSIQSGAQARESSSRAAMGRQGIQKSPHGYEMEGE 169
RE+ERER R R+R E E + + RE R+ ++ E E E
Sbjct: 208 REKERERERERERERERERERERERERERERERERERERERERERERERERERERE 263
Score = 27.5 bits (58), Expect = 6.9
Identities = 17/56 (30%), Positives = 24/56 (42%)
Frame = +2
Query: 2 RERERERHIPRSRQRVEESETRSIQSGAQARESSSRAAMGRQGIQKSPHGYEMEGE 169
+ERERER R R+R E E + + RE R+ ++ E E E
Sbjct: 210 KERERERERERERERERERERERERERERERERERERERERERERERERERERERE 265
>SB_38792| Best HMM Match : 7tm_2 (HMM E-Value=2e-13)
Length = 1287
Score = 29.1 bits (62), Expect = 2.3
Identities = 18/63 (28%), Positives = 28/63 (44%)
Frame = +2
Query: 2 RERERERHIPRSRQRVEESETRSIQSGAQARESSSRAAMGRQGIQKSPHGYEMEGEPLRW 181
R R ++P SR V E+ TR ++ S G+QG+Q+ P Y P+
Sbjct: 914 RPRYMNMNMPYSR--VSEANTRGVEYPRYTSTPSHPRIPGQQGVQRYPGPYNKVVRPIDG 971
Query: 182 CIS 190
+S
Sbjct: 972 IVS 974
>SB_9094| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 510
Score = 29.1 bits (62), Expect = 2.3
Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = +2
Query: 26 IPRSRQRVEESETRSIQSGAQARESSSRAAM--GRQGIQKSPHGY 154
IPR++QR ++ + + + + S+S+ + R G QK H Y
Sbjct: 265 IPRAKQRTDQQQRKELHTSQGLSASASKVILQGWRSGTQKQYHSY 309
>SB_2709| Best HMM Match : SBP (HMM E-Value=0.83)
Length = 154
Score = 28.7 bits (61), Expect = 3.0
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -2
Query: 178 PKGFAFHLVPMWAFLNSLSAHRCSRR*FTCLRAALNTPS 62
PKG+ F +VP+W+ L + S R ++ +TPS
Sbjct: 10 PKGYRFQIVPLWSSLTNRSVFDHRFRFIIVWKSRNSTPS 48
>SB_41748| Best HMM Match : Transposase_14 (HMM E-Value=0.79)
Length = 270
Score = 28.7 bits (61), Expect = 3.0
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -2
Query: 178 PKGFAFHLVPMWAFLNSLSAHRCSRR*FTCLRAALNTPS 62
PKG+ F +VP+W+ L + S R ++ +TPS
Sbjct: 10 PKGYRFQIVPLWSSLTNRSVFDHRFRFIIVWKSRNSTPS 48
>SB_22759| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 466
Score = 28.3 bits (60), Expect = 4.0
Identities = 16/55 (29%), Positives = 24/55 (43%)
Frame = +2
Query: 29 PRSRQRVEESETRSIQSGAQARESSSRAAMGRQGIQKSPHGYEMEGEPLRWCISC 193
P +R+ ++TR I Q E R Q+S G G PLR+ ++C
Sbjct: 191 PVMARRIHPNDTRKIARSLQVFEQHGRPHSELLAEQQSKDGGSAYGGPLRFDLTC 245
>SB_34124| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 468
Score = 27.9 bits (59), Expect = 5.3
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 137 KSPHGYEMEGEPLRWCISC*GHRPRKS 217
+S HG MEG P+ W +S G P+ S
Sbjct: 84 RSQHGTRMEGVPVCWYVSVWGLSPQVS 110
>SB_25657| Best HMM Match : Glyco_hydro_18 (HMM E-Value=0)
Length = 829
Score = 27.9 bits (59), Expect = 5.3
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
Frame = -3
Query: 282 LMSCTRTHLTNGLNSAAWLQRQLF--RGRCP 196
LMS + +LTNG+ SAA + +L R RCP
Sbjct: 763 LMSAVKNYLTNGVPSAAKGEERLHNTRRRCP 793
>SB_22220| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 369
Score = 27.5 bits (58), Expect = 6.9
Identities = 28/105 (26%), Positives = 45/105 (42%), Gaps = 9/105 (8%)
Frame = +2
Query: 8 RERERHIPRSRQRVEES-ETRSIQSGAQARESSSRAAMGRQGIQKSPHGYEMEGEPLRWC 184
R E R ++ ++S E +I +G R++ S+ RQ +K PH + P C
Sbjct: 126 RANEATAKRLKEMSQQSGEISAISTGPPRRKTGSKGGR-RQESRKPPHTDSSKSNPHPKC 184
Query: 185 ISC*GHRPR-----KSWR*S--QAAEFSPF-VRCVRVQLIKNGKK 295
C PR +W+ + E + F V C ++ K GKK
Sbjct: 185 KFCHRLHPRAKEKCPAWQKTCDTCGELNHFSVACKALKASKKGKK 229
>SB_57969| Best HMM Match : zf-CCHC (HMM E-Value=0.0097)
Length = 410
Score = 27.1 bits (57), Expect = 9.2
Identities = 28/105 (26%), Positives = 45/105 (42%), Gaps = 9/105 (8%)
Frame = +2
Query: 8 RERERHIPRSRQRVEES-ETRSIQSGAQARESSSRAAMGRQGIQKSPHGYEMEGEPLRWC 184
R E R ++ ++S E +I +G R++ S+ RQ +K PH + P C
Sbjct: 181 RANEATAKRLKEMSQQSGEISAITTGPPRRKTGSKGGR-RQESRKPPHTDSSKSNPHPKC 239
Query: 185 ISC*GHRPR-----KSWR*S--QAAEFSPF-VRCVRVQLIKNGKK 295
C PR +W+ + E + F V C ++ K GKK
Sbjct: 240 KFCHRLHPRAKEKCPAWQKTCDTCGELNHFSVACKALKASKKGKK 284
>SB_41214| Best HMM Match : Gag_spuma (HMM E-Value=2)
Length = 454
Score = 27.1 bits (57), Expect = 9.2
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -3
Query: 252 NGLNSAAWLQRQLFRGRCP*HEMHHRRGS 166
N L S W+ R LF+ R P ++ RRG+
Sbjct: 376 NPLVSDGWMYRMLFKKRAPFKDVCKRRGT 404
>SB_33562| Best HMM Match : ATP-synt_8 (HMM E-Value=0.37)
Length = 292
Score = 27.1 bits (57), Expect = 9.2
Identities = 12/24 (50%), Positives = 17/24 (70%), Gaps = 2/24 (8%)
Frame = -2
Query: 178 PKGFAFHLVPMW-AFLN-SLSAHR 113
PKG+ F +VP+W +F N S+ HR
Sbjct: 251 PKGYRFQIVPLWTSFSNRSVFGHR 274
>SB_27475| Best HMM Match : PCMT (HMM E-Value=5.5)
Length = 63
Score = 27.1 bits (57), Expect = 9.2
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +2
Query: 320 GCLNHIEENDEVLVAGFGRKGHA 388
G N +EEN +LV G GRKG++
Sbjct: 39 GNANLLEENRLILVTGDGRKGYS 61
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,590,040
Number of Sequences: 59808
Number of extensions: 364823
Number of successful extensions: 1751
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1536
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1678
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1148326654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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