Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_B07
         (412 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    24   0.50 
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    24   0.50 
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    24   0.50 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   2.0  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   3.6  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    20   8.2  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    20   8.2  

>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 24.2 bits (50), Expect = 0.50
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +3

Query: 267 YPLDNNYNFIAFIFPNQVQFP 329
           YP DN YN+ + I PN  Q P
Sbjct: 17  YPSDNYYNYTSDI-PNAQQMP 36


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 24.2 bits (50), Expect = 0.50
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +3

Query: 267 YPLDNNYNFIAFIFPNQVQFP 329
           YP DN YN+ + I PN  Q P
Sbjct: 17  YPSDNYYNYTSDI-PNAQQMP 36


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 24.2 bits (50), Expect = 0.50
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +3

Query: 267 YPLDNNYNFIAFIFPNQVQFP 329
           YP DN YN+ + I PN  Q P
Sbjct: 17  YPSDNYYNYTSDI-PNAQQMP 36


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 2.0
 Identities = 7/16 (43%), Positives = 8/16 (50%)
 Frame = +3

Query: 201  WNKSQDGNRPEWIPIQ 248
            WN     N PEW P +
Sbjct: 1358 WNPGSTTNYPEWQPTE 1373


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.4 bits (43), Expect = 3.6
 Identities = 9/34 (26%), Positives = 16/34 (47%)
 Frame = +3

Query: 189 DKNGWNKSQDGNRPEWIPIQNGYRIQYPLDNNYN 290
           D N  N  ++GN  ++  I  G  + Y +   Y+
Sbjct: 460 DSNNNNNKEEGNSCQYCNIAFGDAVLYTIHMGYH 493


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 20.2 bits (40), Expect = 8.2
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +2

Query: 131 PALNIRYKRQIENNANLFIGQ 193
           P  N+ Y    +NN N+F+ Q
Sbjct: 153 PIFNLVYVYCCDNNFNVFLRQ 173


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 20.2 bits (40), Expect = 8.2
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -2

Query: 285 NCCPKGIEFGN 253
           NC P+G  FG+
Sbjct: 41  NCSPQGASFGS 51


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,675
Number of Sequences: 336
Number of extensions: 2304
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8963165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)