Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_B07
(412 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U50312-1|AAA92318.1| 285|Caenorhabditis elegans Hypothetical pr... 29 1.3
U50307-4|AAA92305.1| 413|Caenorhabditis elegans Hypothetical pr... 27 5.3
AL117207-17|CAI79269.1| 421|Caenorhabditis elegans Hypothetical... 27 5.3
Z78540-6|CAD30431.1| 887|Caenorhabditis elegans Hypothetical pr... 27 7.0
Z78540-5|CAB01738.2| 793|Caenorhabditis elegans Hypothetical pr... 27 7.0
Z72501-3|CAD30430.1| 887|Caenorhabditis elegans Hypothetical pr... 27 7.0
U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical p... 27 7.0
U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical p... 27 7.0
AJ133838-1|CAB44432.1| 793|Caenorhabditis elegans DYC-1 protein... 27 7.0
AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical ... 27 7.0
>U50312-1|AAA92318.1| 285|Caenorhabditis elegans Hypothetical
protein B0222.1 protein.
Length = 285
Score = 29.1 bits (62), Expect = 1.3
Identities = 19/59 (32%), Positives = 26/59 (44%)
Frame = +1
Query: 139 EYKIQKADRKQREFIYWTRTDGTNLRTGTVPNGSQFRMVTEFNTLWTTIIIL*PSFFLI 315
EY+I D++ R + T T L G + S M NT W TII++ LI
Sbjct: 135 EYQITDDDQELRNVTFSNGTKPTTLTFGCTSSESCCGMECCSNTSWVTIILIIVGIVLI 193
>U50307-4|AAA92305.1| 413|Caenorhabditis elegans Hypothetical
protein F43H9.3 protein.
Length = 413
Score = 27.1 bits (57), Expect = 5.3
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = -1
Query: 202 HPFLSNK*IRVVFYLPFVSYIQCRSPDWL 116
HP SN+ ++ + LP+V YI+ + P+ L
Sbjct: 25 HPSSSNENVKPISNLPYVDYIKKKYPEKL 53
>AL117207-17|CAI79269.1| 421|Caenorhabditis elegans Hypothetical
protein Y60A3A.25 protein.
Length = 421
Score = 27.1 bits (57), Expect = 5.3
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +3
Query: 186 LDKNGWNKSQDGNRPEWIPIQNGYRIQYPLDNN 284
+D + + QD N W+ + N + Q P DNN
Sbjct: 106 MDMQPYQEYQDNNESGWVDLNNDNQFQQP-DNN 137
>Z78540-6|CAD30431.1| 887|Caenorhabditis elegans Hypothetical
protein C33G3.1b protein.
Length = 887
Score = 26.6 bits (56), Expect = 7.0
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +2
Query: 119 PVRRPALNI-RYKRQIENNANLFIGQERMEQISGREPSRMDPNSEWLPNS 265
P+R+PA+ + + + +++ + M+ EPS MDPN LP+S
Sbjct: 774 PMRQPAVPVNKIQPKVDVFRKKTLKTLSMDIAEEPEPSEMDPNRNNLPSS 823
>Z78540-5|CAB01738.2| 793|Caenorhabditis elegans Hypothetical
protein C33G3.1a protein.
Length = 793
Score = 26.6 bits (56), Expect = 7.0
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +2
Query: 119 PVRRPALNI-RYKRQIENNANLFIGQERMEQISGREPSRMDPNSEWLPNS 265
P+R+PA+ + + + +++ + M+ EPS MDPN LP+S
Sbjct: 680 PMRQPAVPVNKIQPKVDVFRKKTLKTLSMDIAEEPEPSEMDPNRNNLPSS 729
>Z72501-3|CAD30430.1| 887|Caenorhabditis elegans Hypothetical
protein C33G3.1b protein.
Length = 887
Score = 26.6 bits (56), Expect = 7.0
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +2
Query: 119 PVRRPALNI-RYKRQIENNANLFIGQERMEQISGREPSRMDPNSEWLPNS 265
P+R+PA+ + + + +++ + M+ EPS MDPN LP+S
Sbjct: 774 PMRQPAVPVNKIQPKVDVFRKKTLKTLSMDIAEEPEPSEMDPNRNNLPSS 823
>U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical
protein EEED8.4 protein.
Length = 191
Score = 26.6 bits (56), Expect = 7.0
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 154 KADRKQREFIYWTRTDGTNLRTGTVPNGSQFR 249
K +KQ+ F Y D +++ V NGS FR
Sbjct: 90 KFTKKQKNFAYIEFDDSSSIENALVMNGSLFR 121
>U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical
protein EEED8.12 protein.
Length = 197
Score = 26.6 bits (56), Expect = 7.0
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 154 KADRKQREFIYWTRTDGTNLRTGTVPNGSQFR 249
K +KQ+ F Y D +++ V NGS FR
Sbjct: 96 KFTKKQKNFAYIEFDDSSSIENALVMNGSLFR 127
>AJ133838-1|CAB44432.1| 793|Caenorhabditis elegans DYC-1 protein
protein.
Length = 793
Score = 26.6 bits (56), Expect = 7.0
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +2
Query: 119 PVRRPALNI-RYKRQIENNANLFIGQERMEQISGREPSRMDPNSEWLPNS 265
P+R+PA+ + + + +++ + M+ EPS MDPN LP+S
Sbjct: 680 PMRQPAVPVNKIQPKVDVFRKKTLKTLSMDIAEEPEPSEMDPNRNNLPSS 729
>AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical
protein Y32H12A.8 protein.
Length = 3901
Score = 26.6 bits (56), Expect = 7.0
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +2
Query: 137 LNIRYKRQIENNANLFIGQERMEQISGRE 223
+ + Y RQ +NN +LF Q+R ++ RE
Sbjct: 2029 IRLGYTRQKKNNGDLFRVQDRSRKVVNRE 2057
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,923,488
Number of Sequences: 27780
Number of extensions: 208731
Number of successful extensions: 575
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 560
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 575
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 662437636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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