Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_B06
(292 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_20665| Best HMM Match : 7tm_3 (HMM E-Value=1.8e-10) 29 0.86
SB_20306| Best HMM Match : Vicilin_N (HMM E-Value=1.8) 28 1.1
SB_14494| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 1.5
SB_40873| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 2.0
SB_48476| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.5
SB_50053| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 4.6
SB_724| Best HMM Match : eIF-3c_N (HMM E-Value=0) 26 4.6
SB_39578| Best HMM Match : DUF1213 (HMM E-Value=0.032) 26 4.6
SB_45203| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 6.1
SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0) 26 6.1
SB_39358| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 6.1
SB_19322| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 8.0
SB_13832| Best HMM Match : LRR_1 (HMM E-Value=5.4e-10) 25 8.0
SB_5373| Best HMM Match : Lung_7-TM_R (HMM E-Value=6.6) 25 8.0
SB_42321| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 8.0
SB_23424| Best HMM Match : Ank (HMM E-Value=1.1e-16) 25 8.0
>SB_20665| Best HMM Match : 7tm_3 (HMM E-Value=1.8e-10)
Length = 1514
Score = 28.7 bits (61), Expect = 0.86
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = -2
Query: 147 GQICFSISLNALPVLAASASRFTKAXNADKADGQEYNQMFVHF 19
G + I LNA+ + A + A + D EY+ MFV F
Sbjct: 1035 GVVSLDIELNAVDINQCDAEKEDHASDYHLTDNVEYSAMFVEF 1077
>SB_20306| Best HMM Match : Vicilin_N (HMM E-Value=1.8)
Length = 360
Score = 28.3 bits (60), Expect = 1.1
Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = +2
Query: 125 EIEKQICPKLKNKC-RKTSKQTMLKNNLTT 211
E +I PK K RKTS++T LK +LTT
Sbjct: 14 ETSPEISPKTGRKTDRKTSRKTSLKRSLTT 43
>SB_14494| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 219
Score = 27.9 bits (59), Expect = 1.5
Identities = 21/61 (34%), Positives = 28/61 (45%)
Frame = +2
Query: 107 TGNAFSEIEKQICPKLKNKCRKTSKQTMLKNNLTTWWTIFNKFMSQHESLTLKRQSKKKQ 286
TG SE EK K + K +K K + L T NK + HE ++SKKK+
Sbjct: 51 TGVEPSETEKIESEKKRKKEKKNKKDMETQETLKT---NNNKKIEHHELADKNKKSKKKR 107
Query: 287 K 289
K
Sbjct: 108 K 108
>SB_40873| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2496
Score = 27.5 bits (58), Expect = 2.0
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = -2
Query: 240 LINLLKIVHHVVKLFFNI-VCFEVFLHLFFNFGQICFSISLNALPVLAASASRFT 79
L++ + IV ++ + NI VC ++ + FG CF SL+ +L S+ T
Sbjct: 20 LLSSVNIVFILIGIVGNILVCVVIYRNSHLRFGMNCFIASLSIADLLVCMVSQPT 74
>SB_48476| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 370
Score = 26.6 bits (56), Expect = 3.5
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = -2
Query: 291 YFCFFLLWRFRVKDSCWLINLLKIVHHVVK-LFFNIVCFEVFLHLFFNFGQICF 133
YFC LLW+FR+K S + KI K L + C + + L F +C+
Sbjct: 45 YFC--LLWQFRIKRSKLKVPKNKIKRTKPKTLKKKVFCSQSLVELNDYFANLCW 96
>SB_50053| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 959
Score = 26.2 bits (55), Expect = 4.6
Identities = 11/43 (25%), Positives = 21/43 (48%)
Frame = +2
Query: 128 IEKQICPKLKNKCRKTSKQTMLKNNLTTWWTIFNKFMSQHESL 256
+ ++C K+K TSK+ + L WW + + Q +S+
Sbjct: 834 VNPKLCVCSKHKKALTSKRDLRAEVLNVWWPLGKVYYKQIKSI 876
>SB_724| Best HMM Match : eIF-3c_N (HMM E-Value=0)
Length = 564
Score = 26.2 bits (55), Expect = 4.6
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = +2
Query: 56 ALSAFXAFVKRDAEAASTGNAFSEIEKQICPKLKNKCRKTSK 181
ALS FVK + E A S+I + L+ K RK SK
Sbjct: 44 ALSELEDFVKENWEDAEGRKKLSKINARALATLRQKLRKYSK 85
>SB_39578| Best HMM Match : DUF1213 (HMM E-Value=0.032)
Length = 521
Score = 26.2 bits (55), Expect = 4.6
Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +2
Query: 125 EIEKQICPKLKNKC-RKTSKQTMLKNNLTT 211
E +I PK K RKTS++T L +LTT
Sbjct: 214 ETSPEISPKTGRKTSRKTSRKTSLNRSLTT 243
>SB_45203| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 668
Score = 25.8 bits (54), Expect = 6.1
Identities = 8/25 (32%), Positives = 18/25 (72%)
Frame = +1
Query: 169 ENFKTDNVKKQFNNMVDDF*QIYEP 243
+NF VK QF++++D + ++++P
Sbjct: 223 DNFLPPQVKAQFHSLLDKYDKVFDP 247
>SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0)
Length = 2858
Score = 25.8 bits (54), Expect = 6.1
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +1
Query: 133 KANLSEIKKQVQENFKTDNVKKQFNNMVDD 222
+A LSE ++ E FK DNV+KQ +DD
Sbjct: 525 QAQLSEAQRNA-EKFKNDNVRKQ--KTIDD 551
>SB_39358| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 147
Score = 25.8 bits (54), Expect = 6.1
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +2
Query: 170 KTSKQTMLKNNLTTWWTIFNKFMSQHESLTLKRQSKKKQK 289
K +K + NL + + N+ +S KR+SKKK K
Sbjct: 42 KKTKNAEKRKNLNDFLKVMNQQERSRKSAEAKRESKKKIK 81
>SB_19322| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4994
Score = 25.4 bits (53), Expect = 8.0
Identities = 15/47 (31%), Positives = 19/47 (40%)
Frame = -3
Query: 197 FLTLSVLKFSCTCFLISDKFAFQFXXXXXXXXXXXXRVSQKRXTLIK 57
FLT V K+SC + KF F +Q+ TLIK
Sbjct: 4358 FLTYEVFKYSCRGLYENHKFLFTLLLALKIEIQDGKVKNQEFQTLIK 4404
>SB_13832| Best HMM Match : LRR_1 (HMM E-Value=5.4e-10)
Length = 637
Score = 25.4 bits (53), Expect = 8.0
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = +2
Query: 101 ASTGNAFSEIEKQICPKLKNKCRKTSKQTMLKNNLTT 211
AS G E+++ +CP N C + ML L T
Sbjct: 499 ASEGVTVDELDQDVCPFESNGCSVPGQLPMLYKRLFT 535
>SB_5373| Best HMM Match : Lung_7-TM_R (HMM E-Value=6.6)
Length = 303
Score = 25.4 bits (53), Expect = 8.0
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +1
Query: 19 KMNKHLIIFLAVCFISVXRFCETRRRSSKHRQRV 120
K+ H + F +C +S+ FC + HR RV
Sbjct: 64 KLKAHRVRFAHLCRMSMLHFCVILVKLKAHRVRV 97
>SB_42321| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 648
Score = 25.4 bits (53), Expect = 8.0
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +1
Query: 133 KANLSEIKKQVQENFKTDNVKKQFNNMVDDF 225
K NL E K Q N K +K +NN VDD+
Sbjct: 538 KINLRESKNQ---NRKESKKRKHWNNHVDDY 565
>SB_23424| Best HMM Match : Ank (HMM E-Value=1.1e-16)
Length = 494
Score = 25.4 bits (53), Expect = 8.0
Identities = 13/50 (26%), Positives = 25/50 (50%)
Frame = +2
Query: 92 AEAASTGNAFSEIEKQICPKLKNKCRKTSKQTMLKNNLTTWWTIFNKFMS 241
A + +GN + E+ P+L K K + + +NL +++F K +S
Sbjct: 234 ARSRKSGNLYDELRPYTAPELPKKSGKPAGKNHF-DNLRQLYSLFEKQLS 282
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,823,705
Number of Sequences: 59808
Number of extensions: 121294
Number of successful extensions: 411
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 406
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 411
length of database: 16,821,457
effective HSP length: 70
effective length of database: 12,634,897
effective search space used: 328507322
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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