Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_B06
(292 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF148954-1|AAD37411.1| 4280|Caenorhabditis elegans myotactin for... 29 0.73
AF040648-4|AAK21414.2| 4280|Caenorhabditis elegans Lethal protei... 29 0.73
AF016449-10|AAG24001.2| 353|Caenorhabditis elegans Serpentine r... 28 1.3
Z81545-8|CAB04444.1| 327|Caenorhabditis elegans Hypothetical pr... 27 1.7
AF024503-8|AAG24090.2| 283|Caenorhabditis elegans Hypothetical ... 27 1.7
Z29095-4|CAA82348.3| 444|Caenorhabditis elegans Hypothetical pr... 27 2.2
U64841-1|AAB04845.2| 357|Caenorhabditis elegans Serpentine rece... 27 3.0
AY661556-1|AAV70493.1| 714|Caenorhabditis elegans acetylcholine... 27 3.0
AF078786-4|AAC26944.4| 714|Caenorhabditis elegans Sodium:neurot... 27 3.0
AF067613-11|AAN73862.2| 334|Caenorhabditis elegans Serpentine r... 27 3.0
AF106575-15|AAC78164.2| 350|Caenorhabditis elegans Serpentine r... 26 3.9
AF067623-5|AAC17555.3| 1043|Caenorhabditis elegans Guanylyl cycl... 26 3.9
AB201390-1|BAE78830.1| 1073|Caenorhabditis elegans recepotor typ... 26 3.9
Z70038-7|CAA93886.2| 373|Caenorhabditis elegans Hypothetical pr... 26 5.2
Z34801-2|CAD82919.1| 884|Caenorhabditis elegans Hypothetical pr... 26 5.2
Z34801-1|CAA84330.1| 860|Caenorhabditis elegans Hypothetical pr... 26 5.2
U64841-2|AAB04846.2| 337|Caenorhabditis elegans Serpentine rece... 26 5.2
L07144-6|AAK21443.1| 834|Caenorhabditis elegans Temporarily ass... 26 5.2
L07144-5|AAU20841.1| 837|Caenorhabditis elegans Temporarily ass... 26 5.2
AF125954-6|AAD14707.2| 346|Caenorhabditis elegans Serpentine re... 26 5.2
AC006769-7|AAF60589.1| 346|Caenorhabditis elegans Serpentine re... 26 5.2
Z68160-4|CAA92292.1| 583|Caenorhabditis elegans Hypothetical pr... 25 6.8
AL117195-5|CAB55012.1| 732|Caenorhabditis elegans Hypothetical ... 25 6.8
AL021487-11|CAA16355.2| 330|Caenorhabditis elegans Hypothetical... 25 6.8
Z68009-5|CAA92007.1| 208|Caenorhabditis elegans Hypothetical pr... 25 9.1
U80446-6|AAB37805.2| 783|Caenorhabditis elegans Hypothetical pr... 25 9.1
AF106575-11|AAC78166.1| 329|Caenorhabditis elegans Hypothetical... 25 9.1
>AF148954-1|AAD37411.1| 4280|Caenorhabditis elegans myotactin form A
protein.
Length = 4280
Score = 28.7 bits (61), Expect = 0.73
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Frame = +1
Query: 40 IFLAVCFI-SVXRFCETRRRSSKHRQRV*RN*K--ANLSEIKKQVQENFK 180
I L +C I + +FC+ R RSSK R+ N + L E K + EN +
Sbjct: 3921 ILLLICLIWCISKFCKDRYRSSKEHSRLVTNGQHAPLLEEQKAGMNENMR 3970
>AF040648-4|AAK21414.2| 4280|Caenorhabditis elegans Lethal protein
805, isoform a protein.
Length = 4280
Score = 28.7 bits (61), Expect = 0.73
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Frame = +1
Query: 40 IFLAVCFI-SVXRFCETRRRSSKHRQRV*RN*K--ANLSEIKKQVQENFK 180
I L +C I + +FC+ R RSSK R+ N + L E K + EN +
Sbjct: 3921 ILLLICLIWCISKFCKDRYRSSKEHSRLVTNGQHAPLLEEQKAGMNENMR 3970
>AF016449-10|AAG24001.2| 353|Caenorhabditis elegans Serpentine
receptor, class t protein5 protein.
Length = 353
Score = 27.9 bits (59), Expect = 1.3
Identities = 12/48 (25%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = -2
Query: 291 YFCFFLLWRFRVKDSCWLINLLK--IVHHVVKLFFNIVCFEVFLHLFF 154
Y C++L+++F S WL + I V+ FF+ ++ ++ F
Sbjct: 218 YLCYYLIFKFGYSTSMWLYKSKRQIIAQGVILSFFHAATAIIYEYILF 265
>Z81545-8|CAB04444.1| 327|Caenorhabditis elegans Hypothetical
protein F49H6.11 protein.
Length = 327
Score = 27.5 bits (58), Expect = 1.7
Identities = 10/40 (25%), Positives = 23/40 (57%)
Frame = -2
Query: 219 VHHVVKLFFNIVCFEVFLHLFFNFGQICFSISLNALPVLA 100
+ ++ LFF I+ + + +FF+ G + F S++ + +A
Sbjct: 235 IQSIMVLFFKIITVTISIPIFFDEGSVLFVSSMSIVDFMA 274
>AF024503-8|AAG24090.2| 283|Caenorhabditis elegans Hypothetical
protein F31F4.11 protein.
Length = 283
Score = 27.5 bits (58), Expect = 1.7
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +2
Query: 179 KQTMLKNNLTTWWTIFNKFMSQHESLTLKRQSKKKQK 289
K+T + + +N SQHE L LK SKK QK
Sbjct: 125 KETKFQKVCCVYENPWNLKRSQHEYLHLKNYSKKNQK 161
>Z29095-4|CAA82348.3| 444|Caenorhabditis elegans Hypothetical
protein R10E11.5 protein.
Length = 444
Score = 27.1 bits (57), Expect = 2.2
Identities = 11/28 (39%), Positives = 21/28 (75%), Gaps = 2/28 (7%)
Frame = +1
Query: 124 RN*KANLSEIKKQVQENF--KTDNVKKQ 201
+N K+N++E+KK V++N K D++ K+
Sbjct: 322 KNIKSNVNEVKKDVEKNIAEKVDDITKE 349
>U64841-1|AAB04845.2| 357|Caenorhabditis elegans Serpentine
receptor, class t protein13 protein.
Length = 357
Score = 26.6 bits (56), Expect = 3.0
Identities = 11/48 (22%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = -2
Query: 291 YFCFFLLWRFRVKDSCWLINLLK--IVHHVVKLFFNIVCFEVFLHLFF 154
Y C+ L+++F S WL + ++ V+ F+ V +++++ F
Sbjct: 217 YLCYHLIFKFGYSTSMWLYRSKQQIVIQAVILCSFHAVAAYIYVYMQF 264
>AY661556-1|AAV70493.1| 714|Caenorhabditis elegans
acetylcholine/choline transporter protein.
Length = 714
Score = 26.6 bits (56), Expect = 3.0
Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = -3
Query: 209 LLNCFLTLSVLKFSCTCFLIS-DKF 138
L+ C LT S + F+C F IS DKF
Sbjct: 380 LVGCLLTFSAIGFTCYEFAISLDKF 404
>AF078786-4|AAC26944.4| 714|Caenorhabditis elegans
Sodium:neurotransmitter symporterfamily protein 6
protein.
Length = 714
Score = 26.6 bits (56), Expect = 3.0
Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = -3
Query: 209 LLNCFLTLSVLKFSCTCFLIS-DKF 138
L+ C LT S + F+C F IS DKF
Sbjct: 380 LVGCLLTFSAIGFTCYEFAISLDKF 404
>AF067613-11|AAN73862.2| 334|Caenorhabditis elegans Serpentine
receptor, class z protein19 protein.
Length = 334
Score = 26.6 bits (56), Expect = 3.0
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = -2
Query: 252 DSCWLINLLKIVHHVVKLFFNIVCFEVFLHLF 157
D+C LIN + I + FN+V F +++++F
Sbjct: 23 DNCILINYIFISVFATLVAFNLVLFTLYVYVF 54
>AF106575-15|AAC78164.2| 350|Caenorhabditis elegans Serpentine
receptor, class w protein91 protein.
Length = 350
Score = 26.2 bits (55), Expect = 3.9
Identities = 12/49 (24%), Positives = 25/49 (51%)
Frame = -2
Query: 258 VKDSCWLINLLKIVHHVVKLFFNIVCFEVFLHLFFNFGQICFSISLNAL 112
V+ S WL L+ ++ +V + + V ++ F F FS+ +++L
Sbjct: 122 VRCSTWLTVLMALIRFLVSKYASEVRYQKMSMFIFGFKSSAFSVFISSL 170
>AF067623-5|AAC17555.3| 1043|Caenorhabditis elegans Guanylyl cyclase
protein 23 protein.
Length = 1043
Score = 26.2 bits (55), Expect = 3.9
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +1
Query: 34 LIIFLAVCFISVXRFCETR 90
LII L +CF + R CE R
Sbjct: 438 LIILLIICFFILSRVCENR 456
>AB201390-1|BAE78830.1| 1073|Caenorhabditis elegans recepotor type
guanyly cyclase protein.
Length = 1073
Score = 26.2 bits (55), Expect = 3.9
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +1
Query: 34 LIIFLAVCFISVXRFCETR 90
LII L +CF + R CE R
Sbjct: 468 LIILLIICFFILSRVCENR 486
>Z70038-7|CAA93886.2| 373|Caenorhabditis elegans Hypothetical
protein ZK1067.7 protein.
Length = 373
Score = 25.8 bits (54), Expect = 5.2
Identities = 12/37 (32%), Positives = 16/37 (43%)
Frame = +2
Query: 56 ALSAFXAFVKRDAEAASTGNAFSEIEKQICPKLKNKC 166
ALS+ F + TG A S ++Q C N C
Sbjct: 16 ALSSTFVFADEETVKNETGLALSRAKRQCCSSNSNSC 52
>Z34801-2|CAD82919.1| 884|Caenorhabditis elegans Hypothetical
protein F59A2.1b protein.
Length = 884
Score = 25.8 bits (54), Expect = 5.2
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = +2
Query: 77 FVKRDAEAASTGNAFSEIEKQICPKLKNKCRKTSKQTMLKNN 202
F K AEA S+ NA I+K+I P + K ++ ++ ++ +N
Sbjct: 405 FEKAVAEAKSSSNAGKTIDKEIKPAAEVK-KEVKQEVVIPSN 445
>Z34801-1|CAA84330.1| 860|Caenorhabditis elegans Hypothetical
protein F59A2.1a protein.
Length = 860
Score = 25.8 bits (54), Expect = 5.2
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = +2
Query: 77 FVKRDAEAASTGNAFSEIEKQICPKLKNKCRKTSKQTMLKNN 202
F K AEA S+ NA I+K+I P + K ++ ++ ++ +N
Sbjct: 381 FEKAVAEAKSSSNAGKTIDKEIKPAAEVK-KEVKQEVVIPSN 421
>U64841-2|AAB04846.2| 337|Caenorhabditis elegans Serpentine
receptor, class t protein14 protein.
Length = 337
Score = 25.8 bits (54), Expect = 5.2
Identities = 10/48 (20%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = -2
Query: 291 YFCFFLLWRFRVKDSCWLINLLK--IVHHVVKLFFNIVCFEVFLHLFF 154
Y C+ L+++F S W+ + I+ V+ F+ + +++++ F
Sbjct: 197 YLCYHLIFKFGYTTSMWMYKTKQQIIIQAVILCSFHAIAAYIYVYMQF 244
>L07144-6|AAK21443.1| 834|Caenorhabditis elegans Temporarily
assigned gene nameprotein 84, isoform a protein.
Length = 834
Score = 25.8 bits (54), Expect = 5.2
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +2
Query: 113 NAFSEIEKQICPKLKNK 163
N FS+IEK IC + KN+
Sbjct: 94 NMFSDIEKYICTQTKNE 110
>L07144-5|AAU20841.1| 837|Caenorhabditis elegans Temporarily
assigned gene nameprotein 84, isoform b protein.
Length = 837
Score = 25.8 bits (54), Expect = 5.2
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +2
Query: 113 NAFSEIEKQICPKLKNK 163
N FS+IEK IC + KN+
Sbjct: 94 NMFSDIEKYICTQTKNE 110
>AF125954-6|AAD14707.2| 346|Caenorhabditis elegans Serpentine
receptor, class t protein1 protein.
Length = 346
Score = 25.8 bits (54), Expect = 5.2
Identities = 20/80 (25%), Positives = 39/80 (48%), Gaps = 11/80 (13%)
Frame = -2
Query: 291 YFCFFLLWRFRVKDSCWLINLLK--IVHHVVKLFFN---IVCFEVFLHLFFN------FG 145
Y C++L++++ S WL + I+ V+ FF+ + +E F+ F+ G
Sbjct: 218 YLCYYLIFKYGYSTSMWLYKSKRQIILQGVIICFFHAGTAIIYE-FVQFFYTPQWLILAG 276
Query: 144 QICFSISLNALPVLAASASR 85
QI + S +L ++ S +R
Sbjct: 277 QIFWQWSSGSLSIVYLSLNR 296
>AC006769-7|AAF60589.1| 346|Caenorhabditis elegans Serpentine
receptor, class t protein2 protein.
Length = 346
Score = 25.8 bits (54), Expect = 5.2
Identities = 20/80 (25%), Positives = 39/80 (48%), Gaps = 11/80 (13%)
Frame = -2
Query: 291 YFCFFLLWRFRVKDSCWLINLLK--IVHHVVKLFFN---IVCFEVFLHLFFN------FG 145
Y C++L++++ S WL + I+ V+ FF+ + +E F+ F+ G
Sbjct: 218 YLCYYLIFKYGYSTSMWLYKSKRQIILQGVIICFFHAGTAIIYE-FVQFFYTPQWLILAG 276
Query: 144 QICFSISLNALPVLAASASR 85
QI + S +L ++ S +R
Sbjct: 277 QIFWQWSSGSLSIVYLSLNR 296
>Z68160-4|CAA92292.1| 583|Caenorhabditis elegans Hypothetical
protein D1046.4 protein.
Length = 583
Score = 25.4 bits (53), Expect = 6.8
Identities = 8/23 (34%), Positives = 17/23 (73%)
Frame = -2
Query: 258 VKDSCWLINLLKIVHHVVKLFFN 190
V+ + W ++L+ IVH ++K+F +
Sbjct: 331 VEKTAWTVSLIIIVHLILKIFIS 353
>AL117195-5|CAB55012.1| 732|Caenorhabditis elegans Hypothetical
protein Y57A10A.7 protein.
Length = 732
Score = 25.4 bits (53), Expect = 6.8
Identities = 9/20 (45%), Positives = 17/20 (85%)
Frame = +1
Query: 136 ANLSEIKKQVQENFKTDNVK 195
+ L+EIK++++E+ +TDN K
Sbjct: 617 SELTEIKQKIKESIRTDNDK 636
>AL021487-11|CAA16355.2| 330|Caenorhabditis elegans Hypothetical
protein Y45F10B.4 protein.
Length = 330
Score = 25.4 bits (53), Expect = 6.8
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = -3
Query: 215 TMLLNCFLTLSVLKFSCTCFLISDKFAFQF 126
T+ + FL + + + SC CF I D +F
Sbjct: 63 TINQSVFLVIILTQLSCLCFFIGDFITLRF 92
>Z68009-5|CAA92007.1| 208|Caenorhabditis elegans Hypothetical
protein R09A8.5 protein.
Length = 208
Score = 25.0 bits (52), Expect = 9.1
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = -2
Query: 219 VHHVVKLFFNIVCFEVFLHLFFNFGQICF 133
V H + F ++CF V ++ FN + F
Sbjct: 56 VGHAILFLFEMICFLVLINALFNERPLLF 84
>U80446-6|AAB37805.2| 783|Caenorhabditis elegans Hypothetical
protein F56A3.1 protein.
Length = 783
Score = 25.0 bits (52), Expect = 9.1
Identities = 14/51 (27%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Frame = +1
Query: 64 SVXRFCETRRRSSKHRQRV*RN*-KANLSEIKKQVQENFKTDNVKKQFNNM 213
+ ++ ET ++SS+ R N +S KK++++N KT+ + K F+++
Sbjct: 65 NTTKWAETLQKSSEKAGRDWLNPFPIRVSSAKKEIEKNSKTELLAKGFDDI 115
>AF106575-11|AAC78166.1| 329|Caenorhabditis elegans Hypothetical
protein K04F1.7 protein.
Length = 329
Score = 25.0 bits (52), Expect = 9.1
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = -2
Query: 243 WLINLLKIVHHVVKLFFNIV 184
+ +N+L+I H V +FFNI+
Sbjct: 6 YFLNMLQIFCHQVLIFFNII 25
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,196,000
Number of Sequences: 27780
Number of extensions: 107051
Number of successful extensions: 434
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 428
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 434
length of database: 12,740,198
effective HSP length: 70
effective length of database: 10,795,598
effective search space used: 280685548
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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