Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_B04
         (488 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          23   1.5  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    22   3.4  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   7.9  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    21   7.9  

>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = -3

Query: 483 TLSEPWMILRPTWI 442
           TL E WM L P WI
Sbjct: 499 TLIETWMPLLPQWI 512


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -1

Query: 461 YYVQLGYISLREWYRVE 411
           + V +GYI   EW +VE
Sbjct: 101 FVVVMGYIGFIEWDKVE 117


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -2

Query: 412 RISWIGSTEHLTASFDDIQA 353
           ++SW G+TE +    D  +A
Sbjct: 937 KVSWEGNTERVLVPGDQTEA 956


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 8/28 (28%), Positives = 16/28 (57%)
 Frame = +2

Query: 161 VQRGLVGTIIERFEKKGFKLVGLKFVWP 244
           ++  L+ +  E FEK GF  + + + +P
Sbjct: 121 LRANLIASSFEYFEKYGFNGLDIDWEYP 148


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,572
Number of Sequences: 336
Number of extensions: 2466
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11420693
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)