Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_B04
(488 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79754-13|CAB02101.1| 153|Caenorhabditis elegans Hypothetical p... 179 1e-45
AC006644-2|AAF39837.1| 118|Caenorhabditis elegans Hypothetical ... 56 2e-08
AC025721-13|AAR85897.1| 139|Caenorhabditis elegans Hypothetical... 40 0.001
U41554-3|AAA83298.2| 745|Caenorhabditis elegans Nematode astaci... 34 0.064
U29382-6|AAF99998.1| 379|Caenorhabditis elegans Hypothetical pr... 27 5.5
Z81129-6|CAB03412.1| 799|Caenorhabditis elegans Hypothetical pr... 27 7.3
Z81129-5|CAB03411.1| 779|Caenorhabditis elegans Hypothetical pr... 27 7.3
Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical pr... 27 7.3
>Z79754-13|CAB02101.1| 153|Caenorhabditis elegans Hypothetical
protein F25H2.5 protein.
Length = 153
Score = 179 bits (435), Expect = 1e-45
Identities = 81/120 (67%), Positives = 96/120 (80%)
Frame = +2
Query: 128 ERTFLMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLASRPFFPGL 307
ERTF+ +KPDGV RGLVG II RFE++G+KLV LK + S+ L+ HY DL +PFFP L
Sbjct: 5 ERTFIAIKPDGVHRGLVGKIIARFEERGYKLVALKQMTASKAHLEVHYQDLKDKPFFPSL 64
Query: 308 VKYMSSGPVVPMVWEGLNVVKTGRQMLGATNPADSQPGTIRGDLCIQVGRNIIHGSDSVE 487
++YMSSGPVV MVW+GL+VVK GR MLGATNP S PGTIRGD CIQ GRNI HGSD+V+
Sbjct: 65 IEYMSSGPVVAMVWQGLDVVKQGRSMLGATNPLASAPGTIRGDFCIQTGRNICHGSDAVD 124
>AC006644-2|AAF39837.1| 118|Caenorhabditis elegans Hypothetical
protein F55A3.6 protein.
Length = 118
Score = 55.6 bits (128), Expect = 2e-08
Identities = 31/66 (46%), Positives = 40/66 (60%)
Frame = +2
Query: 287 RPFFPGLVKYMSSGPVVPMVWEGLNVVKTGRQMLGATNPADSQPGTIRGDLCIQVGRNII 466
+PFFP L+ YMSSGPVV M+WEG +VVK R +LG + +I DL ++
Sbjct: 33 KPFFPLLIDYMSSGPVVAMLWEGCDVVKRARVILGEELEV-GEFRSIFYDLVVRDTHKGC 91
Query: 467 HGSDSV 484
H SDSV
Sbjct: 92 HCSDSV 97
>AC025721-13|AAR85897.1| 139|Caenorhabditis elegans Hypothetical
protein Y48G8AL.15 protein.
Length = 139
Score = 39.9 bits (89), Expect = 0.001
Identities = 35/124 (28%), Positives = 54/124 (43%), Gaps = 2/124 (1%)
Frame = +2
Query: 113 MADQRERTFLMV-KPDGV-QRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLAS 286
+ Q FL+V KP+ V R L + G ++ ++ + S L +Q Y+
Sbjct: 4 VGSQNALKFLVVLKPEIVAHRVLAQVALSELRSNGIEIEEMRQMKISGSLAKQLYAQHQG 63
Query: 287 RPFFPGLVKYMSSGPVVPMVWEGLNVVKTGRQMLGATNPADSQPGTIRGDLCIQVGRNII 466
+ F+ LV+++SSGPV+ M G G L QP IR + RN+
Sbjct: 64 KFFYDRLVRHISSGPVIAMRVSGNARKCIGSSRLWPRLEPTVQP--IRQRFALSDVRNVA 121
Query: 467 HGSD 478
H SD
Sbjct: 122 HASD 125
>U41554-3|AAA83298.2| 745|Caenorhabditis elegans Nematode astacin
protease protein38 protein.
Length = 745
Score = 33.9 bits (74), Expect = 0.064
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +1
Query: 334 CSHGLGGPECRQNWPSNARCYQSS*FSTRYHSRRLMYPS--WT 456
C GL G C Q +PSNA+C + R+ + R Y S WT
Sbjct: 336 CPEGLSGRYCEQVYPSNAQCARGKLTRERHINERECYQSAIWT 378
>U29382-6|AAF99998.1| 379|Caenorhabditis elegans Hypothetical
protein R03H10.1 protein.
Length = 379
Score = 27.5 bits (58), Expect = 5.5
Identities = 9/32 (28%), Positives = 19/32 (59%)
Frame = +2
Query: 254 LLQQHYSDLASRPFFPGLVKYMSSGPVVPMVW 349
LL + + ++ S +PG V+++ P++P W
Sbjct: 144 LLDRCWKNVDSMELYPGTVQFLDKLPIIPSNW 175
>Z81129-6|CAB03412.1| 799|Caenorhabditis elegans Hypothetical
protein T23F1.7b protein.
Length = 799
Score = 27.1 bits (57), Expect = 7.3
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Frame = +2
Query: 272 SDLASRPFFPGLVKYMSSGPVVPMVWEGLNVVKTG--RQMLGATNPADSQPGTIR 430
SDL S + + + VV WEG+ +V+ G R + G N A+ P R
Sbjct: 66 SDLRSLRYPYAEFAFTDNNAVVMQSWEGVEIVEDGVSRLIFGRENGAEITPSADR 120
>Z81129-5|CAB03411.1| 779|Caenorhabditis elegans Hypothetical
protein T23F1.7a protein.
Length = 779
Score = 27.1 bits (57), Expect = 7.3
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Frame = +2
Query: 272 SDLASRPFFPGLVKYMSSGPVVPMVWEGLNVVKTG--RQMLGATNPADSQPGTIR 430
SDL S + + + VV WEG+ +V+ G R + G N A+ P R
Sbjct: 66 SDLRSLRYPYAEFAFTDNNAVVMQSWEGVEIVEDGVSRLIFGRENGAEITPSADR 120
>Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical protein
F12F6.6 protein.
Length = 1126
Score = 27.1 bits (57), Expect = 7.3
Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Frame = +2
Query: 281 ASRPFFPGLVKYMSSGPVVPMVWEGLNVVKTGRQML---GATNPADSQPGTI 427
AS F Y+ V+ VW G +T Q + GATN D++ GTI
Sbjct: 1003 ASSEFLENSKAYIIDNGVILFVWVGSACPQTWVQDVFGVGATNQIDTESGTI 1054
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,406,201
Number of Sequences: 27780
Number of extensions: 232833
Number of successful extensions: 698
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 686
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 698
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 914086948
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -