Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_B02
(605 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0492 - 4102379-4103494,4104105-4104383,4105395-4105724 31 0.94
04_01_0333 - 4391571-4392289,4393048-4393159 30 1.2
02_05_0089 - 25715637-25716333,25716481-25717238 30 1.2
07_01_0321 - 2255342-2255604,2256506-2256779,2256886-2257068 30 1.6
10_08_0608 + 19184722-19185224,19185331-19185410,19186048-191862... 29 2.9
06_01_1010 + 7866158-7866661 29 2.9
01_06_0791 - 32026086-32026944,32027044-32027600,32027686-320279... 29 2.9
11_03_0162 - 10956997-10957323,10957390-10957568,10957823-109579... 29 3.8
07_03_1450 + 26620178-26620456,26622122-26622775 29 3.8
06_01_1001 + 7783072-7783493,7783530-7784212,7784582-7784592 28 5.0
05_05_0219 + 23371561-23371680,23371799-23372207,23374520-233746... 28 5.0
03_05_0901 + 28635672-28636094,28637623-28637802,28637903-286381... 28 5.0
02_05_1160 + 34580680-34582659 28 5.0
01_07_0132 - 41298184-41298558,41298648-41298729,41298850-412989... 28 5.0
12_01_0121 - 920988-921296,921556-921620,921874-921923,922009-92... 28 6.6
08_01_0833 + 8113327-8113449,8113797-8114020,8115361-8115437,811... 28 6.6
03_06_0353 - 33317015-33318235,33318567-33318824,33319587-333199... 28 6.6
03_02_0467 + 8707777-8707892,8708030-8708096,8708190-8708260,870... 28 6.6
11_02_0082 - 8088169-8088284,8088613-8088697,8090344-8090442,809... 27 8.7
11_01_0620 - 4964263-4965052,4965578-4965663,4966332-4966413,496... 27 8.7
07_01_0013 - 99952-100413,100534-100704 27 8.7
06_03_1310 + 29238644-29240260 27 8.7
>05_01_0492 - 4102379-4103494,4104105-4104383,4105395-4105724
Length = 574
Score = 30.7 bits (66), Expect = 0.94
Identities = 17/38 (44%), Positives = 19/38 (50%), Gaps = 5/38 (13%)
Frame = -2
Query: 601 GSTDARQHPTRKQPTATA-----NPATPKLGATQSPPP 503
G D+RQ PT QP A PA P L A +PPP
Sbjct: 243 GQADSRQQPTLPQPQHQAPPPSHPPALPALPAPNAPPP 280
>04_01_0333 - 4391571-4392289,4393048-4393159
Length = 276
Score = 30.3 bits (65), Expect = 1.2
Identities = 24/78 (30%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Frame = +3
Query: 114 VFIGSASPA--RAAFKIAWTGLYHLPKNSDGSLMTSRLTEGGMKPEGQGCDFICPGDEAL 287
V G++SPA R+ F +A +G YHL S G+ + G + F C A
Sbjct: 61 VLHGASSPALARSGFYLAPSGTYHLAAPSSGTWSGTFWARTGCAVDSSTGRFTCA--TAD 118
Query: 288 CIPARLICNGVVNCPNMT 341
C + CNG P +T
Sbjct: 119 CGSGDVACNGRGPSPPVT 136
>02_05_0089 - 25715637-25716333,25716481-25717238
Length = 484
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/56 (26%), Positives = 26/56 (46%)
Frame = -1
Query: 449 RYSPQQIHVAEPTQTILRVCLPSSLFFGCPVFLIP*SHIRTVHDTIAYQPSWYAEC 282
++ P+ + A P +L CLP + ++ CPV H RT + P++ C
Sbjct: 80 KHHPKAVQFARPVSHLL--CLPLTPYYECPVATTAHKHTRTRRGCLLSLPAFPLLC 133
>07_01_0321 - 2255342-2255604,2256506-2256779,2256886-2257068
Length = 239
Score = 29.9 bits (64), Expect = 1.6
Identities = 21/63 (33%), Positives = 31/63 (49%)
Frame = -3
Query: 582 STLRASSQRPLPTQPPQSLEQPSHLLPYS*LAHTIPEIHHSIDLKVFPPTDPCSRADANY 403
ST + +S P+ P +QP+H+ P S P+IHH PPTDP + N
Sbjct: 7 STRQVASSSSNPSNPR---DQPTHM-PDS------PQIHHPPPPPPPPPTDPAASTTPNA 56
Query: 402 PQS 394
P++
Sbjct: 57 PRN 59
>10_08_0608 +
19184722-19185224,19185331-19185410,19186048-19186235,
19187021-19187927,19188015-19188142,19189270-19189356,
19189422-19189472,19189582-19189668,19189746-19189873,
19190469-19190608,19190721-19190882,19190964-19192733,
19192807-19192922,19193077-19193227,19193243-19193371,
19193598-19194139
Length = 1722
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -2
Query: 580 HPTRKQPTATANPATPKLGATQSPPP 503
HP P A P+TP+L SPPP
Sbjct: 32 HPPPPPPLEPAPPSTPQLRGEASPPP 57
>06_01_1010 + 7866158-7866661
Length = 167
Score = 29.1 bits (62), Expect = 2.9
Identities = 28/120 (23%), Positives = 44/120 (36%), Gaps = 3/120 (2%)
Frame = +3
Query: 159 AWTGLYHLPKNSDGSLMTSRLTEGGMKPEGQGCDFICPGDEALCIPARL---ICNGVVNC 329
+W G P GSL+ +GG++ G G G R + G
Sbjct: 10 SWRGSAPAPSRDGGSLVALTAHDGGVRDVGGGGGQRAEGRGGTADARRKEAGMPGGGARA 69
Query: 330 PNMTSGNKKYWTAEEQRARETYSEDSLRRLGYMDLLGGIPLGQLNDESPELCARARSMGG 509
P SG + W E R + + R+ G +G + +G D+ AR+ +GG
Sbjct: 70 PG--SGKGRRWRPEHGGKRR-HRRRTGRKEGGEPGVGAVTVGSDEDDDGSAAARSGRLGG 126
>01_06_0791 -
32026086-32026944,32027044-32027600,32027686-32027903,
32028171-32028261
Length = 574
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
Frame = +3
Query: 477 ELCARARSMGGGD----WVAPSFGVAGLAVAVGCLRV 575
E R +++GGG W+ P + +AGLA A G + V
Sbjct: 433 EAARRRQALGGGGMSAFWLVPQYALAGLAEAFGVIGV 469
>11_03_0162 -
10956997-10957323,10957390-10957568,10957823-10957922,
10959333-10959397,10959480-10959572,10961062-10961607,
10961627-10961678,10961753-10961884,10963049-10963210,
10963532-10963582
Length = 568
Score = 28.7 bits (61), Expect = 3.8
Identities = 21/92 (22%), Positives = 37/92 (40%), Gaps = 1/92 (1%)
Frame = +3
Query: 6 VSETDKLPILSAGELGFESLDDPLVIEKEKT-RSIRIVFIGSASPARAAFKIAWTGLYHL 182
+S + LP SA +G D L+++ E+ + + + A + + + T
Sbjct: 196 LSPSGSLPQASAQTVGLAPGDGDLLVDMEQADQEVALQVAALALGIQKSSAPSVTNPLSQ 255
Query: 183 PKNSDGSLMTSRLTEGGMKPEGQGCDFICPGD 278
SDG + S L G +G G D G+
Sbjct: 256 GSRSDGGVFASDLPPGNASSQGSGADLSASGN 287
>07_03_1450 + 26620178-26620456,26622122-26622775
Length = 310
Score = 28.7 bits (61), Expect = 3.8
Identities = 18/47 (38%), Positives = 21/47 (44%)
Frame = -3
Query: 573 RASSQRPLPTQPPQSLEQPSHLLPYS*LAHTIPEIHHSIDLKVFPPT 433
R SSQ P P P Q HL P+S L P HH ++ P T
Sbjct: 124 RKSSQPPPPPMPHQPYHHHHHLNPFS-LPPPPPAYHHHHLIQEEPAT 169
>06_01_1001 + 7783072-7783493,7783530-7784212,7784582-7784592
Length = 371
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -1
Query: 542 SHPKAWSNPVTSSHTPSSRTQFRR 471
S AWS+P + H P++R Q RR
Sbjct: 182 SETYAWSDPTSIDHHPNARVQARR 205
>05_05_0219 +
23371561-23371680,23371799-23372207,23374520-23374635,
23375385-23375855
Length = 371
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/54 (27%), Positives = 23/54 (42%)
Frame = -2
Query: 598 STDARQHPTRKQPTATANPATPKLGATQSPPPILLARAHNSGDSSFN*PKGIPP 437
S++ + T++ T PA P T PPP + GD+ N +PP
Sbjct: 59 SSNGQNPVTKETHHQTPPPAKPPKDQTPPPPPAVSESKGQKGDAGNNSGHPVPP 112
>03_05_0901 +
28635672-28636094,28637623-28637802,28637903-28638172,
28638506-28638757,28639205-28639453,28639533-28639606,
28639798-28639915,28640421-28640555,28640813-28640965
Length = 617
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = -2
Query: 586 RQHPTRKQPTATANPATPKLGATQSPPPILLAR 488
R+HPTR A A ++P+ + PP+ + R
Sbjct: 25 RRHPTRVAAAAAATASSPEAAMAAAAPPLPMMR 57
>02_05_1160 + 34580680-34582659
Length = 659
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
Frame = -2
Query: 604 CGST--DARQHPTRKQPT--ATANPATPKLGATQSPPPILL 494
CG T DA PT + AT NP+TP + + PP+ L
Sbjct: 13 CGITKSDAESTPTTLEHVFLATMNPSTPSAASAAAVPPVSL 53
>01_07_0132 -
41298184-41298558,41298648-41298729,41298850-41298977,
41299059-41299157,41299279-41299434,41300709-41300783,
41301962-41302137,41303210-41303252,41303336-41303503,
41303584-41303731,41306316-41306587
Length = 573
Score = 28.3 bits (60), Expect = 5.0
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +3
Query: 534 GVAGLAVAVGCLRVGCCLASVL 599
G GL VAVGC V C +A+ L
Sbjct: 2 GRVGLGVAVGCAAVTCAIAAAL 23
>12_01_0121 -
920988-921296,921556-921620,921874-921923,922009-922106,
923832-923867,925351-925731,925839-926324,926471-926647
Length = 533
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = -2
Query: 109 RIDLVFSFSMTKGSSKDSNPSSPAESIGNL 20
R DL+ + + TKG+ +P +P +S+GNL
Sbjct: 474 RKDLLSAEASTKGTKSMDHPCNPIKSMGNL 503
>08_01_0833 +
8113327-8113449,8113797-8114020,8115361-8115437,
8115516-8115600,8115695-8115812,8116516-8116887
Length = 332
Score = 27.9 bits (59), Expect = 6.6
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +3
Query: 495 RSMGGGDWVAPSFGVAGLAVAVG 563
R G G W + S G+ G+AVA+G
Sbjct: 35 RGSGDGRWRSNSGGIGGIAVAIG 57
>03_06_0353 -
33317015-33318235,33318567-33318824,33319587-33319904,
33319949-33320011,33320103-33320496,33320684-33320796,
33320932-33321639,33321667-33323199,33323395-33323607,
33323718-33324700,33324890-33325423,33325694-33325820,
33326083-33326162,33327347-33327377,33327949-33328053,
33328119-33328124,33328349-33328985,33329144-33329478,
33330394-33331113
Length = 2792
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/35 (40%), Positives = 15/35 (42%)
Frame = -1
Query: 599 QHRRQAAPYAQAANGHCQPSHPKAWSNPVTSSHTP 495
QHR A A AA G QP K P +H P
Sbjct: 122 QHRPVAPATAAAAPGQPQPKKKKKQKEPAPQAHPP 156
>03_02_0467 +
8707777-8707892,8708030-8708096,8708190-8708260,
8708629-8708746,8708820-8708893,8709278-8709333,
8709448-8709531,8709611-8709698,8709786-8709863,
8710335-8710391,8710606-8711044
Length = 415
Score = 27.9 bits (59), Expect = 6.6
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = +3
Query: 12 ETDKLPILSAGELGFESLDDPLVIEKEKTRSIRIVFIGSASPARAAFKIAWTGL 173
E +K I+ G G E D L E+ +RI F+G P RA + +TG+
Sbjct: 228 EPEKPLIIHVGRFGREKNLDFLKRVMERLPGVRIAFVGD-GPYRAELERMFTGM 280
>11_02_0082 -
8088169-8088284,8088613-8088697,8090344-8090442,
8090537-8090609,8090694-8090804,8090901-8091074,
8091184-8091574,8091662-8092283,8092379-8093251,
8093294-8093800
Length = 1016
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = -3
Query: 573 RASSQRPLPTQPPQSLEQPSHLLPYS*LAHTIPEIHHSIDLKVFPPTDP 427
+A+S+ P P PP + P+ P+ LA ++P+ + PP DP
Sbjct: 533 QAASRAPSPPAPPSPPQDPAPSPPHDPLAPSLPQAPAAT-----PPQDP 576
>11_01_0620 -
4964263-4965052,4965578-4965663,4966332-4966413,
4967052-4967156,4967600-4967772,4967988-4968101,
4973939-4974037,4974320-4974398,4975424-4975492,
4975955-4976061
Length = 567
Score = 27.5 bits (58), Expect = 8.7
Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 5/65 (7%)
Frame = -2
Query: 562 PTATANPATPKLGATQ-SPPPILLARAHNSGDSSFN*PKGIP----PNRSM*PSRRKLSS 398
PTA AN P T+ +PPP +R+ + D N P P P+R M S R +
Sbjct: 369 PTAPANIPAPSHSKTETNPPPSYDSRSESVSDDFIN-PTAAPSFSMPSRPMSESNRPAVN 427
Query: 397 EYVSL 383
SL
Sbjct: 428 RQESL 432
>07_01_0013 - 99952-100413,100534-100704
Length = 210
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -3
Query: 441 PPTDPCSRADANYPQSMSP 385
PP PCS A PQS SP
Sbjct: 117 PPCRPCSATHAGLPQSSSP 135
>06_03_1310 + 29238644-29240260
Length = 538
Score = 27.5 bits (58), Expect = 8.7
Identities = 21/58 (36%), Positives = 24/58 (41%)
Frame = -3
Query: 561 QRPLPTQPPQSLEQPSHLLPYS*LAHTIPEIHHSIDLKVFPPTDPCSRADANYPQSMS 388
+R PT PP S PSHL P P S + P T P S A+ P S S
Sbjct: 392 RRTPPTPPPPSSPTPSHLPP------PPPTYSESPKSSMPPSTSPPSSHGASPPSSSS 443
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,412,123
Number of Sequences: 37544
Number of extensions: 437690
Number of successful extensions: 1774
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1630
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1769
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1442939384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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