Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_B01
         (373 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_38975| Best HMM Match : Serpin (HMM E-Value=0)                      63   6e-11
SB_55237| Best HMM Match : Serpin (HMM E-Value=0)                      63   8e-11
SB_55238| Best HMM Match : Serpin (HMM E-Value=0)                      52   2e-07
SB_23612| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   1.2  
SB_48319| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   3.7  
SB_55496| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   6.4  
SB_8770| Best HMM Match : No HMM Matches (HMM E-Value=.)               26   8.5  

>SB_38975| Best HMM Match : Serpin (HMM E-Value=0)
          Length = 380

 Score = 63.3 bits (147), Expect = 6e-11
 Identities = 32/110 (29%), Positives = 57/110 (51%), Gaps = 3/110 (2%)
 Frame = +1

Query: 31  SKIYIGQSVEPRQRFAAIAQEFYKTELKSVDFL-NTEVAANEINSWVSNTTQGKIPKLVD 207
           ++++     E  + F   ++E +  E+  VD++ N+  A + +N WV   T+ KI  L+ 
Sbjct: 91  NRLFAQMGFEILEEFKKASKESFSAEMALVDYVKNSNGARDTVNRWVEQKTKDKIKNLIP 150

Query: 208 ADDMIGM--VVLIINTLYFKGSWRHQFPPNMTKPGPFYVSPKSPKSVEFM 351
            + M     ++ ++N +YFKGSW   F  N T+ G F  +P     V+FM
Sbjct: 151 -EGMFNKDTILCLVNAVYFKGSWMKHFNRNATQSGKFKTTPSQEIQVQFM 199


>SB_55237| Best HMM Match : Serpin (HMM E-Value=0)
          Length = 363

 Score = 62.9 bits (146), Expect = 8e-11
 Identities = 35/105 (33%), Positives = 58/105 (55%), Gaps = 2/105 (1%)
 Frame = +1

Query: 31  SKIYIGQSVEPRQRFAAIAQEFYKTELKSVDFLNTEV-AANEINSWVSNTTQGKIPKLVD 207
           +KI+     E  + F    +EFY +E+  VDF+N    A  E+N+WV   T+G I +L+ 
Sbjct: 59  NKIWGHDEFEILEEFLHGTREFYHSEMAQVDFVNKAFDARKEVNAWVHQQTKGNIKELIP 118

Query: 208 ADDMIGMV-VLIINTLYFKGSWRHQFPPNMTKPGPFYVSPKSPKS 339
              +  +  ++I+N +YFKG W+ +F    T    F+V P+S +S
Sbjct: 119 HGVINSLTRLIIVNAVYFKGVWKKEFGEENTFHAAFFV-PESHES 162


>SB_55238| Best HMM Match : Serpin (HMM E-Value=0)
          Length = 345

 Score = 51.6 bits (118), Expect = 2e-07
 Identities = 28/114 (24%), Positives = 54/114 (47%), Gaps = 3/114 (2%)
 Frame = +1

Query: 19  LNFGSKIYIGQSVEPRQRFAAIAQEFYKTELKSVDF-LNTEVAANEINSWVSNTTQGKIP 195
           ++  + +++ +     + F  I Q++Y  ++  VD+  + E A   +N WV   T+ KI 
Sbjct: 50  MSIANNLFLQKDFSILKEFTDICQKYYDADISLVDYKTDFEGARKHVNQWVEERTKKKIC 109

Query: 196 KLVDADDMIGMV--VLIINTLYFKGSWRHQFPPNMTKPGPFYVSPKSPKSVEFM 351
            L+ A  +  M+  + ++N +YFKG W   F    +    F  +  +   VE M
Sbjct: 110 DLI-APGVFNMLTRLTLVNAIYFKGMWDKPFKKEHSHSSEFRTTSSNEVEVEMM 162


>SB_23612| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1021

 Score = 29.1 bits (62), Expect = 1.2
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +1

Query: 262  GSWRHQFPPNMTKPGPFYVSPKSP 333
            G  R+Q+PP M   GPFY S   P
Sbjct: 978  GQARYQYPPAMQHAGPFYNSQIQP 1001


>SB_48319| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 965

 Score = 27.5 bits (58), Expect = 3.7
 Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
 Frame = -3

Query: 266 LPLKYRVFIINTTIPIMSSASTNLGIFP-CVVFDTQEL 156
           LP+   +  I T  P+M  + TN+ ++P C VF T +L
Sbjct: 876 LPMSPAMGPIPTMQPVMGYSPTNIFVYPWCCVFHTVDL 913


>SB_55496| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 193

 Score = 26.6 bits (56), Expect = 6.4
 Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
 Frame = -2

Query: 315 VEWSRFCHIRW----ELVTPASFEIQGVYNQHNHPNHVISI 205
           V W   C I+W    +L+T  S++ Q +  QH   N ++S+
Sbjct: 15  VLWLVLCFIKWGRYGKLITVKSYDGQLLTRQHQLENEILSL 55


>SB_8770| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1303

 Score = 26.2 bits (55), Expect = 8.5
 Identities = 19/73 (26%), Positives = 31/73 (42%)
 Frame = -1

Query: 229  PSQSCHQHRPIWVSFPVLYLIPRN*FRSQPLQCLKSRQISIQSCKTLERSLQNAVLVQHS 50
            PS +    +P WV +  L L  +   R   +  + SR  + Q C T E  L     +  S
Sbjct: 882  PSSALFNRQPEWVVYHELVLTTKEYMREVVVMRVHSRLQTFQRC-TSEEILHAGGSLTES 940

Query: 49   GLYISYYRSLRRI 11
               I ++ SL+ +
Sbjct: 941  NHRILFFLSLKGV 953


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,390,043
Number of Sequences: 59808
Number of extensions: 248558
Number of successful extensions: 538
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 495
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 536
length of database: 16,821,457
effective HSP length: 74
effective length of database: 12,395,665
effective search space used: 607387585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)