Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_B01
         (373 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    23   1.2  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          21   4.7  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      21   4.7  
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                21   4.7  
X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alp...    21   6.2  
DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    21   6.2  

>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 23.0 bits (47), Expect = 1.2
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +1

Query: 94  FYKTELKSVDFLNTEVAANEINSWV 168
           FY+ E    DF+ T +  N I+ W+
Sbjct: 258 FYEVEGIGYDFIPTVLDRNVIDKWI 282


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.0 bits (42), Expect = 4.7
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = -1

Query: 205 RPIWVSFPV 179
           RPIW +FP+
Sbjct: 310 RPIWSNFPI 318



 Score = 20.2 bits (40), Expect = 8.2
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +1

Query: 73  FAAIAQEFYKTELKSVDFL 129
           F+ +  E+Y T+    DFL
Sbjct: 16  FSLVGAEYYDTKTADKDFL 34


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.0 bits (42), Expect = 4.7
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = -1

Query: 205 RPIWVSFPV 179
           RPIW +FP+
Sbjct: 310 RPIWSNFPI 318



 Score = 20.2 bits (40), Expect = 8.2
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +1

Query: 73  FAAIAQEFYKTELKSVDFL 129
           F+ +  E+Y T+    DFL
Sbjct: 16  FSLVGAEYYDTKTADKDFL 34


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 21.0 bits (42), Expect = 4.7
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = +1

Query: 73  FAAIAQEFYKTELKSVDFLNTEVAANEINS 162
           F  + +  YK E  +   + TE  +N +NS
Sbjct: 78  FGIVYKALYKGEQVAAKIIQTEKYSNMLNS 107


>X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alpha
           protein.
          Length = 461

 Score = 20.6 bits (41), Expect = 6.2
 Identities = 13/40 (32%), Positives = 17/40 (42%)
 Frame = +1

Query: 88  QEFYKTELKSVDFLNTEVAANEINSWVSNTTQGKIPKLVD 207
           QEF      +V  +   VA   I S     TQGK+ K  +
Sbjct: 416 QEFPPLGRFAVRDMRQTVAVGVIKSVTFKDTQGKVTKAAE 455


>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 20.6 bits (41), Expect = 6.2
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = +3

Query: 231 CVDYKHPVFQRKLASPVPTEYD 296
           C +Y HP    KL   +  EYD
Sbjct: 35  CKNYDHPTTLLKLKRYLFCEYD 56


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,411
Number of Sequences: 438
Number of extensions: 2443
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8928360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)