Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_A24
(594 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0533 + 3868230-3868564,3869040-3869098,3869187-3869225,386... 217 4e-57
06_03_1052 - 27217792-27217846,27218025-27218114,27218191-272182... 215 2e-56
04_04_0306 + 24280773-24280776,24280906-24280929,24281023-242811... 207 6e-54
08_01_0179 + 1519141-1519144,1519278-1519301,1519417-1519517,151... 202 1e-52
02_04_0507 + 23546911-23546953,23547011-23547111,23547695-235478... 196 1e-50
04_04_0120 + 22911863-22911904,22912002-22912112,22912212-229127... 137 7e-33
03_01_0208 + 1642041-1642118,1642200-1642310,1643157-1643318,164... 122 3e-28
08_02_0958 - 23044708-23046045,23046131-23046363,23047059-230471... 28 4.9
04_04_1509 - 34074206-34074398,34074506-34074777,34075411-340756... 28 4.9
01_01_0154 - 1355601-1356102,1356197-1356389,1356465-1356520,135... 28 4.9
07_01_0322 - 2258067-2258519,2258620-2258781,2258896-2259159,225... 28 6.5
01_01_0602 - 4484972-4485450,4485949-4485997,4486108-4486237,448... 28 6.5
08_02_0605 + 19237482-19237644,19237957-19238246 27 8.5
05_03_0143 - 8873364-8873834,8873909-8874010 27 8.5
>02_01_0533 +
3868230-3868564,3869040-3869098,3869187-3869225,
3869629-3869729,3870288-3870400,3870976-3871075,
3871170-3871316,3871442-3871502,3871616-3871713,
3871786-3871928,3872221-3872304,3872389-3872478,
3872574-3872628
Length = 474
Score = 217 bits (531), Expect = 4e-57
Identities = 118/185 (63%), Positives = 135/185 (72%)
Frame = +2
Query: 38 TTTDKASAHLVGGAKKVIISAPSGPDAPMFVVGVNLEAYDPSYKVISNASCTTNCLAPLA 217
TTT+KASAHL GGAKKV+ISAPS DAPMFVVGVN ++YDP V+SNASCTTNCLAPLA
Sbjct: 239 TTTEKASAHLKGGAKKVVISAPSA-DAPMFVVGVNEKSYDPKMNVVSNASCTTNCLAPLA 297
Query: 218 KVIHDNFEIIEGLMTTVHATTATQKEWLNWTLLGKTGXGGPAMAVGLRNQQNIIPASTGA 397
KV+H+ F I+EGLMTTVHATTATQK ++ G G A QNIIP+STGA
Sbjct: 298 KVVHEEFGIVEGLMTTVHATTATQKTVDGPSMKDWRGGRGAA--------QNIIPSSTGA 349
Query: 398 LLKLSAKSFHKLNGKLTGMAFRVPVAXVSVVDLTVRLGXPASYEAIKQKVKEAA*GPLKG 577
K K +LNGKLTGMAFRVP VSVVDLT R+ ASY+ +K +K A+ G LKG
Sbjct: 350 -AKAVGKVLPELNGKLTGMAFRVPTPNVSVVDLTCRIEKSASYDDVKAAIKAASEGALKG 408
Query: 578 ILGYT 592
ILGYT
Sbjct: 409 ILGYT 413
>06_03_1052 -
27217792-27217846,27218025-27218114,27218191-27218274,
27218526-27218668,27218748-27218845,27218959-27219019,
27219184-27219330,27219428-27219527,27219701-27219813,
27220302-27220402,27220614-27220652,27220739-27220797,
27221027-27221088,27221411-27221506
Length = 415
Score = 215 bits (525), Expect = 2e-56
Identities = 118/185 (63%), Positives = 134/185 (72%)
Frame = +2
Query: 38 TTTDKASAHLVGGAKKVIISAPSGPDAPMFVVGVNLEAYDPSYKVISNASCTTNCLAPLA 217
TTT+KASAHL GGA+KV+ISAPS DAPMFVVGVN + Y+PS V+SNASCTTNCLAPLA
Sbjct: 180 TTTEKASAHLKGGARKVVISAPSA-DAPMFVVGVNEKNYNPSMNVVSNASCTTNCLAPLA 238
Query: 218 KVIHDNFEIIEGLMTTVHATTATQKEWLNWTLLGKTGXGGPAMAVGLRNQQNIIPASTGA 397
K++H+ F I EGLMTTVHATTATQK ++ G G + QNIIP+STGA
Sbjct: 239 KIVHEEFGIAEGLMTTVHATTATQKTVDGPSMKDWRGGRGAS--------QNIIPSSTGA 290
Query: 398 LLKLSAKSFHKLNGKLTGMAFRVPVAXVSVVDLTVRLGXPASYEAIKQKVKEAA*GPLKG 577
K K LNGKLTGMAFRVP VSVVDLT RL ASYE +K +KEA+ G LKG
Sbjct: 291 -AKAVGKVLPALNGKLTGMAFRVPTPNVSVVDLTCRLEKSASYEDVKAAIKEASEGSLKG 349
Query: 578 ILGYT 592
ILGYT
Sbjct: 350 ILGYT 354
>04_04_0306 +
24280773-24280776,24280906-24280929,24281023-24281123,
24281359-24281502,24281667-24281782,24281869-24281968,
24282068-24282214,24282329-24282389,24282480-24282577,
24283118-24283260,24283374-24283457,24283538-24283627,
24284018-24284063
Length = 385
Score = 207 bits (505), Expect = 6e-54
Identities = 117/184 (63%), Positives = 130/184 (70%)
Frame = +2
Query: 38 TTTDKASAHLVGGAKKVIISAPSGPDAPMFVVGVNLEAYDPSYKVISNASCTTNCLAPLA 217
T DKA+AHL GGAKKV+ISAPS DAPMFVVGVN + Y P ++SNASCTTNCLAPLA
Sbjct: 153 TDKDKAAAHLKGGAKKVVISAPS-KDAPMFVVGVNEKEYKPDIDIVSNASCTTNCLAPLA 211
Query: 218 KVIHDNFEIIEGLMTTVHATTATQKEWLNWTLLGKTGXGGPAMAVGLRNQQNIIPASTGA 397
KVI+D F I+EGLMTTVHA TATQK + K GG A + NIIP+STGA
Sbjct: 212 KVINDRFGIVEGLMTTVHAITATQKTVDGPS--SKDWRGGRAASF------NIIPSSTGA 263
Query: 398 LLKLSAKSFHKLNGKLTGMAFRVPVAXVSVVDLTVRLGXPASYEAIKQKVKEAA*GPLKG 577
K K LNGKLTGMAFRVP VSVVDLTVRL PASY+ IK +KE + G LKG
Sbjct: 264 -AKAVGKVLPALNGKLTGMAFRVPTVDVSVVDLTVRLEKPASYDQIKAAIKEESEGKLKG 322
Query: 578 ILGY 589
ILGY
Sbjct: 323 ILGY 326
>08_01_0179 +
1519141-1519144,1519278-1519301,1519417-1519517,
1519805-1519920,1519944-1520112,1520713-1520859,
1520943-1521003,1521086-1521183,1521608-1521750,
1521980-1522063,1522191-1522280,1522375-1522420
Length = 360
Score = 202 bits (494), Expect = 1e-52
Identities = 114/184 (61%), Positives = 129/184 (70%)
Frame = +2
Query: 38 TTTDKASAHLVGGAKKVIISAPSGPDAPMFVVGVNLEAYDPSYKVISNASCTTNCLAPLA 217
T +KA+AHL GGAKKV+ISAPS DAPMFV GVN + Y ++SNASCTTNCLAPLA
Sbjct: 128 TDKEKAAAHLKGGAKKVVISAPS-KDAPMFVCGVNEDKYTSDIDIVSNASCTTNCLAPLA 186
Query: 218 KVIHDNFEIIEGLMTTVHATTATQKEWLNWTLLGKTGXGGPAMAVGLRNQQNIIPASTGA 397
KVIHDNF IIEGLMTTVHA TATQK + K GG A + NIIP+STGA
Sbjct: 187 KVIHDNFGIIEGLMTTVHAITATQKTVDGPS--SKDWRGGRAASF------NIIPSSTGA 238
Query: 398 LLKLSAKSFHKLNGKLTGMAFRVPVAXVSVVDLTVRLGXPASYEAIKQKVKEAA*GPLKG 577
K K LNGKLTGM+FRVP VSVVDLTVR+ ASY+AIK +K A+ G LKG
Sbjct: 239 -AKAVGKVLPDLNGKLTGMSFRVPTVDVSVVDLTVRIEKAASYDAIKSAIKSASEGKLKG 297
Query: 578 ILGY 589
I+GY
Sbjct: 298 IIGY 301
>02_04_0507 +
23546911-23546953,23547011-23547111,23547695-23547810,
23547897-23547996,23548027-23548215,23548303-23548363,
23548469-23548566,23548943-23549085,23549228-23549311,
23549423-23549512,23549599-23549644
Length = 356
Score = 196 bits (478), Expect = 1e-50
Identities = 111/176 (63%), Positives = 124/176 (70%)
Frame = +2
Query: 62 HLVGGAKKVIISAPSGPDAPMFVVGVNLEAYDPSYKVISNASCTTNCLAPLAKVIHDNFE 241
H+ GGAKKV+ISAPS DAPMFVVGVN + Y ++SNASCTTNCLAPLAKVI+D F
Sbjct: 132 HMQGGAKKVVISAPS-KDAPMFVVGVNEKEYKSDVNIVSNASCTTNCLAPLAKVINDRFG 190
Query: 242 IIEGLMTTVHATTATQKEWLNWTLLGKTGXGGPAMAVGLRNQQNIIPASTGALLKLSAKS 421
I+EGLMTTVHA TATQK ++ K GG A + NIIP+STGA K K
Sbjct: 191 IVEGLMTTVHAITATQKTVDGPSM--KDWRGGRAASF------NIIPSSTGA-AKAVGKV 241
Query: 422 FHKLNGKLTGMAFRVPVAXVSVVDLTVRLGXPASYEAIKQKVKEAA*GPLKGILGY 589
LNGKLTGMAFRVP VSVVDLTVRL PASY+ IK +KE A G LKGILGY
Sbjct: 242 LPALNGKLTGMAFRVPTVDVSVVDLTVRLEKPASYDQIKAAIKEEAEGKLKGILGY 297
>04_04_0120 +
22911863-22911904,22912002-22912112,22912212-22912764,
22912852-22913354
Length = 402
Score = 137 bits (331), Expect = 7e-33
Identities = 81/179 (45%), Positives = 100/179 (55%)
Frame = +2
Query: 47 DKASAHLVGGAKKVIISAPSGPDAPMFVVGVNLEAYDPSYKVISNASCTTNCLAPLAKVI 226
D A H+ GAKKV+I+AP D P +VVGVN + Y P +ISNASCTTNCLAP K++
Sbjct: 172 DGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADQYSPDEPIISNASCTTNCLAPFVKIL 231
Query: 227 HDNFEIIEGLMTTVHATTATQKEWLNWTLLGKTGXGGPAMAVGLRNQQNIIPASTGALLK 406
F II+G MTT H+ T Q+ L A A L NI+P STGA K
Sbjct: 232 DQKFGIIKGTMTTTHSYTGDQR-----LLDASHRDLRRARAAAL----NIVPTSTGA-AK 281
Query: 407 LSAKSFHKLNGKLTGMAFRVPVAXVSVVDLTVRLGXPASYEAIKQKVKEAA*GPLKGIL 583
A L GKL G+A RVP VSVVDL V++ E + Q +++A LKGIL
Sbjct: 282 AVALVLPNLKGKLNGIALRVPTPNVSVVDLVVQVSKKTLAEEVNQAFRDSAANELKGIL 340
>03_01_0208 +
1642041-1642118,1642200-1642310,1643157-1643318,
1643433-1643600,1643683-1643843,1643930-1643991,
1644078-1644127,1644247-1644653,1644760-1644895
Length = 444
Score = 122 bits (293), Expect = 3e-28
Identities = 82/182 (45%), Positives = 103/182 (56%), Gaps = 5/182 (2%)
Frame = +2
Query: 53 ASAHLVGGAKKVIISAPS-GPDAPMFVVGVNLEAYDPSY-KVISNASCTTNCLAPLAKVI 226
A H+ GAKKVII+AP+ G D P +V+GVN Y +ISNASCTTNCLAP K++
Sbjct: 184 AGKHIQAGAKKVIITAPAKGADIPTYVLGVNEGDYSHEVANIISNASCTTNCLAPFVKIL 243
Query: 227 HDNFEIIEGLMTTVHATTATQKEWLNWTLLGKTGXGGPAMAVGLRNQQNIIPASTGALLK 406
+ F I++G MTT H+ T Q+ L A A L NI+P STGA K
Sbjct: 244 DEEFGIVKGTMTTTHSYTGDQR-----LLDASHRDLRRARAAAL----NIVPTSTGA-AK 293
Query: 407 LSAKSFHKLNGKLTGMAFRVPVAXVSVVDL---TVRLGXPASYEAIKQKVKEAA*GPLKG 577
A +L GKL G+A RVP VSVVDL TV+ G A + + ++AA GPL G
Sbjct: 294 AVALVLPQLKGKLNGIALRVPTPNVSVVDLVINTVKTGITA--DDVNAAFRKAAAGPLSG 351
Query: 578 IL 583
IL
Sbjct: 352 IL 353
>08_02_0958 -
23044708-23046045,23046131-23046363,23047059-23047199,
23047296-23048334
Length = 916
Score = 28.3 bits (60), Expect = 4.9
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = +2
Query: 197 NCLAPLAKVIHDNFEIIEGLMTTVHATTATQKEWLNWTL 313
NC APLA+++H F L + + +W WT+
Sbjct: 122 NCEAPLARLMHHGFITPAALHFVRNHGAVPRGDWSTWTV 160
>04_04_1509 - 34074206-34074398,34074506-34074777,34075411-34075608,
34076092-34076187,34076318-34076500,34076597-34076799,
34076887-34077013,34077098-34077292,34077400-34077540,
34077669-34077812,34077876-34078040,34078776-34078976,
34079049-34079195,34079275-34079427,34079731-34079833,
34079954-34080069,34080168-34080349,34080442-34080541,
34081200-34081527,34081605-34081834,34081979-34082110,
34082787-34082859,34083274-34083338
Length = 1248
Score = 28.3 bits (60), Expect = 4.9
Identities = 17/60 (28%), Positives = 28/60 (46%)
Frame = +2
Query: 317 GKTGXGGPAMAVGLRNQQNIIPASTGALLKLSAKSFHKLNGKLTGMAFRVPVAXVSVVDL 496
G+TG G G N + P +T L ++ + HK + L A+ V + ++VDL
Sbjct: 953 GQTGSGKTFTIYGSENNPGLTPRATSELFRVIKRDGHKYSFSL--KAYMVELYQDNLVDL 1010
>01_01_0154 -
1355601-1356102,1356197-1356389,1356465-1356520,
1356997-1357066,1357188-1357314,1357418-1357695,
1357908-1358065,1358166-1358246,1358339-1358410,
1358531-1358602,1358729-1358867,1358987-1360045,
1360170-1360257
Length = 964
Score = 28.3 bits (60), Expect = 4.9
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = -3
Query: 169 FVGRIVGFQVDTNYKHGSIRXTWCGDDYFL--GSTHQVSRSFI 47
F+ G Q +T+Y H + + ++ DD F GS + VS +I
Sbjct: 31 FISIDCGIQPNTSYVHNTTKISYVADDDFTDGGSNYNVSPEYI 73
>07_01_0322 -
2258067-2258519,2258620-2258781,2258896-2259159,
2259196-2259294,2259723-2260131,2260223-2260350,
2261115-2261181,2262766-2262838,2262911-2263130
Length = 624
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = -3
Query: 589 VSQNALQRTLSGFFNLLFNCFVAS 518
+SQN +RTLSGF + FN VA+
Sbjct: 383 ISQNQRERTLSGFRDGRFNILVAT 406
>01_01_0602 -
4484972-4485450,4485949-4485997,4486108-4486237,
4486636-4486778,4486819-4486877,4487167-4487200,
4487489-4487629,4487719-4487907,4488027-4488122,
4488163-4488225,4488588-4489097
Length = 630
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/52 (26%), Positives = 22/52 (42%)
Frame = +2
Query: 107 GPDAPMFVVGVNLEAYDPSYKVISNASCTTNCLAPLAKVIHDNFEIIEGLMT 262
GPD F+ + A P + T + K+I + FE+ EGL +
Sbjct: 300 GPDIRKFLAPLKNRAAKPGDQGFQTVLVTATMTKAVQKLIDEEFEVAEGLQS 351
>08_02_0605 + 19237482-19237644,19237957-19238246
Length = 150
Score = 27.5 bits (58), Expect = 8.5
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Frame = -3
Query: 304 IQPFFLGGSSGM--HCSHQTFNNFKVVVDDLCEGCE 203
+ LGGSSG H + FN ++ V C+GCE
Sbjct: 8 LSDLLLGGSSGKTSHKKKRQFNTVELKVRMDCDGCE 43
>05_03_0143 - 8873364-8873834,8873909-8874010
Length = 190
Score = 27.5 bits (58), Expect = 8.5
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = -2
Query: 431 VCGMTLPTALAARQWKQE*CFADF*APRPSRAPQXQFFPEGSNSTI 294
V + LPT+L + W+ D P PS A P S+ST+
Sbjct: 121 VLHLPLPTSLPRQCWRCPVVLIDAGKPLPSPAVSSSLSPHSSSSTL 166
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,721,414
Number of Sequences: 37544
Number of extensions: 358954
Number of successful extensions: 1027
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 982
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1005
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1411925004
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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