Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_A24
         (594 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    23   2.3  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    23   2.3  
EF127805-1|ABL67942.1|  461|Apis mellifera nicotinic acetylcholi...    21   6.9  
EF127804-1|ABL67941.1|  461|Apis mellifera nicotinic acetylcholi...    21   6.9  
EF127803-1|ABL67940.1|  461|Apis mellifera nicotinic acetylcholi...    21   6.9  
EF127802-1|ABL67939.1|  461|Apis mellifera nicotinic acetylcholi...    21   6.9  
EF127801-1|ABL67938.1|  461|Apis mellifera nicotinic acetylcholi...    21   6.9  
EF127800-1|ABL67937.1|  461|Apis mellifera nicotinic acetylcholi...    21   6.9  
DQ026036-1|AAY87895.1|  529|Apis mellifera nicotinic acetylcholi...    21   6.9  
DQ026035-1|AAY87894.1|  529|Apis mellifera nicotinic acetylcholi...    21   6.9  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = -3

Query: 409 QL*QRASGSRNNVLLISEPHGHRG 338
           +L + ++ SRN  L ++EP+  RG
Sbjct: 876 KLQESSTDSRNPALALAEPYNQRG 899


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = -3

Query: 409 QL*QRASGSRNNVLLISEPHGHRG 338
           +L + ++ SRN  L ++EP+  RG
Sbjct: 914 KLQESSTDSRNPALALAEPYNQRG 937


>EF127805-1|ABL67942.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 6 protein.
          Length = 461

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -3

Query: 571 QRTLSGFFNLLFNCFVAS 518
           +RTL  FFNL+  C + S
Sbjct: 192 RRTLYYFFNLIVPCVLIS 209


>EF127804-1|ABL67941.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 5 protein.
          Length = 461

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -3

Query: 571 QRTLSGFFNLLFNCFVAS 518
           +RTL  FFNL+  C + S
Sbjct: 192 RRTLYYFFNLIVPCVLIS 209


>EF127803-1|ABL67940.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 4 protein.
          Length = 461

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -3

Query: 571 QRTLSGFFNLLFNCFVAS 518
           +RTL  FFNL+  C + S
Sbjct: 192 RRTLYYFFNLIVPCVLIS 209


>EF127802-1|ABL67939.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 3 protein.
          Length = 461

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -3

Query: 571 QRTLSGFFNLLFNCFVAS 518
           +RTL  FFNL+  C + S
Sbjct: 192 RRTLYYFFNLIVPCVLIS 209


>EF127801-1|ABL67938.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 2 protein.
          Length = 461

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -3

Query: 571 QRTLSGFFNLLFNCFVAS 518
           +RTL  FFNL+  C + S
Sbjct: 192 RRTLYYFFNLIVPCVLIS 209


>EF127800-1|ABL67937.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 1 protein.
          Length = 461

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -3

Query: 571 QRTLSGFFNLLFNCFVAS 518
           +RTL  FFNL+  C + S
Sbjct: 192 RRTLYYFFNLIVPCVLIS 209


>DQ026036-1|AAY87895.1|  529|Apis mellifera nicotinic acetylcholine
           receptor alpha6subunit protein.
          Length = 529

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -3

Query: 571 QRTLSGFFNLLFNCFVAS 518
           +RTL  FFNL+  C + S
Sbjct: 260 RRTLYYFFNLIVPCVLIS 277


>DQ026035-1|AAY87894.1|  529|Apis mellifera nicotinic acetylcholine
           receptor alpha6subunit protein.
          Length = 529

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -3

Query: 571 QRTLSGFFNLLFNCFVAS 518
           +RTL  FFNL+  C + S
Sbjct: 260 RRTLYYFFNLIVPCVLIS 277


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,414
Number of Sequences: 438
Number of extensions: 3316
Number of successful extensions: 19
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17359926
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)