Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_A24
(594 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g79530.1 68414.m09271 glyceraldehyde 3-phosphate dehydrogenas... 213 7e-56
At1g16300.1 68414.m01951 glyceraldehyde 3-phosphate dehydrogenas... 208 2e-54
At3g04120.1 68416.m00436 glyceraldehyde-3-phosphate dehydrogenas... 200 6e-52
At1g13440.1 68414.m01570 glyceraldehyde 3-phosphate dehydrogenas... 200 7e-52
At1g12900.1 68414.m01498 glyceraldehyde 3-phosphate dehydrogenas... 133 7e-32
At3g26650.1 68416.m03330 glyceraldehyde 3-phosphate dehydrogenas... 132 2e-31
At1g42970.1 68414.m04947 glyceraldehyde-3-phosphate dehydrogenas... 124 3e-29
At5g24710.1 68418.m02919 WD-40 repeat family protein contains 3 ... 29 2.3
At4g25820.1 68417.m03714 xyloglucan:xyloglucosyl transferase / x... 28 5.4
At1g74360.1 68414.m08615 leucine-rich repeat transmembrane prote... 28 5.4
At3g16250.1 68416.m02050 ferredoxin-related contains Pfam profil... 27 7.1
At1g51110.1 68414.m05746 plastid-lipid associated protein PAP / ... 27 7.1
At5g47620.3 68418.m05877 heterogeneous nuclear ribonucleoprotein... 27 9.4
At5g47620.2 68418.m05879 heterogeneous nuclear ribonucleoprotein... 27 9.4
At5g47620.1 68418.m05878 heterogeneous nuclear ribonucleoprotein... 27 9.4
At2g25320.1 68415.m03029 meprin and TRAF homology domain-contain... 27 9.4
At1g53570.2 68414.m06081 mitogen-activated protein kinase kinase... 27 9.4
At1g53570.1 68414.m06080 mitogen-activated protein kinase kinase... 27 9.4
At1g18190.1 68414.m02262 expressed protein similar to golgin-84 ... 27 9.4
>At1g79530.1 68414.m09271 glyceraldehyde 3-phosphate dehydrogenase,
cytosolic, putative / NAD-dependent
glyceraldehyde-3-phosphate dehydrogenase, putative
similar to glyceraldehyde-3-phosphate dehydrogenase
[Pinus sylvestris] GI:1100223; contains Pfam profiles
PF02800: Glyceraldehyde 3-phosphate dehydrogenase
C-terminal domain, PF00044: Glyceraldehyde 3-phosphate
dehydrogenase NAD binding domain
Length = 422
Score = 213 bits (520), Expect = 7e-56
Identities = 116/185 (62%), Positives = 133/185 (71%)
Frame = +2
Query: 38 TTTDKASAHLVGGAKKVIISAPSGPDAPMFVVGVNLEAYDPSYKVISNASCTTNCLAPLA 217
TT KA++HL GGAKKVIISAPS DAPMFVVGVN Y P+ ++SNASCTTNCLAPLA
Sbjct: 187 TTLSKAASHLKGGAKKVIISAPSA-DAPMFVVGVNEHTYQPNMDIVSNASCTTNCLAPLA 245
Query: 218 KVIHDNFEIIEGLMTTVHATTATQKEWLNWTLLGKTGXGGPAMAVGLRNQQNIIPASTGA 397
KV+H+ F I+EGLMTTVHATTATQK ++ G G + QNIIP+STGA
Sbjct: 246 KVVHEEFGILEGLMTTVHATTATQKTVDGPSMKDWRGGRGAS--------QNIIPSSTGA 297
Query: 398 LLKLSAKSFHKLNGKLTGMAFRVPVAXVSVVDLTVRLGXPASYEAIKQKVKEAA*GPLKG 577
K K +LNGKLTGMAFRVP + VSVVDLT RL ASYE +K +K A+ GPLKG
Sbjct: 298 -AKAVGKVLPELNGKLTGMAFRVPTSNVSVVDLTCRLEKGASYEDVKAAIKHASEGPLKG 356
Query: 578 ILGYT 592
ILGYT
Sbjct: 357 ILGYT 361
>At1g16300.1 68414.m01951 glyceraldehyde 3-phosphate dehydrogenase,
cytosolic, putative / NAD-dependent
glyceraldehyde-3-phosphate dehydrogenase, putative
similar to glyceraldehyde-3-phosphate dehydrogenase
[Pinus sylvestris] GI:1100223; contains Pfam profiles
PF02800: Glyceraldehyde 3-phosphate dehydrogenase
C-terminal domain, PF00044: Glyceraldehyde 3-phosphate
dehydrogenase NAD binding domain
Length = 420
Score = 208 bits (509), Expect = 2e-54
Identities = 115/185 (62%), Positives = 133/185 (71%)
Frame = +2
Query: 38 TTTDKASAHLVGGAKKVIISAPSGPDAPMFVVGVNLEAYDPSYKVISNASCTTNCLAPLA 217
TT +AS+HL GGAKKVIISAPS DAPMFVVGVN + Y P+ ++SNASCTTNCLAPLA
Sbjct: 185 TTVGQASSHLKGGAKKVIISAPSA-DAPMFVVGVNEKTYLPNMDIVSNASCTTNCLAPLA 243
Query: 218 KVIHDNFEIIEGLMTTVHATTATQKEWLNWTLLGKTGXGGPAMAVGLRNQQNIIPASTGA 397
KV+H+ F I+EGLMTTVHATTATQK ++ G G + QNIIP+STGA
Sbjct: 244 KVVHEEFGILEGLMTTVHATTATQKTVDGPSMKDWRGGRGAS--------QNIIPSSTGA 295
Query: 398 LLKLSAKSFHKLNGKLTGMAFRVPVAXVSVVDLTVRLGXPASYEAIKQKVKEAA*GPLKG 577
K K +LNGKLTGMAFRVP VSVVDLT RL ASYE +K +K A+ GPL+G
Sbjct: 296 -AKAVGKVLPELNGKLTGMAFRVPTPNVSVVDLTCRLEKDASYEDVKAAIKFASEGPLRG 354
Query: 578 ILGYT 592
ILGYT
Sbjct: 355 ILGYT 359
>At3g04120.1 68416.m00436 glyceraldehyde-3-phosphate dehydrogenase,
cytosolic (GAPC) / NAD-dependent
glyceraldehyde-3-phosphate dehydrogenase identical to
SP|P25858 Glyceraldehyde 3-phosphate dehydrogenase,
cytosolic (EC 1.2.1.12) {Arabidopsis thaliana}
Length = 338
Score = 200 bits (488), Expect = 6e-52
Identities = 113/185 (61%), Positives = 130/185 (70%)
Frame = +2
Query: 38 TTTDKASAHLVGGAKKVIISAPSGPDAPMFVVGVNLEAYDPSYKVISNASCTTNCLAPLA 217
T DKA+AHL GGAKKV+ISAPS DAPMFVVGVN Y ++SNASCTTNCLAPLA
Sbjct: 107 TDKDKAAAHLKGGAKKVVISAPS-KDAPMFVVGVNEHEYKSDLDIVSNASCTTNCLAPLA 165
Query: 218 KVIHDNFEIIEGLMTTVHATTATQKEWLNWTLLGKTGXGGPAMAVGLRNQQNIIPASTGA 397
KVI+D F I+EGLMTTVH+ TATQK ++ K GG A + NIIP+STGA
Sbjct: 166 KVINDRFGIVEGLMTTVHSITATQKTVDGPSM--KDWRGGRAASF------NIIPSSTGA 217
Query: 398 LLKLSAKSFHKLNGKLTGMAFRVPVAXVSVVDLTVRLGXPASYEAIKQKVKEAA*GPLKG 577
K K LNGKLTGM+FRVP VSVVDLTVRL A+Y+ IK+ +KE + G LKG
Sbjct: 218 -AKAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRLEKAATYDEIKKAIKEESEGKLKG 276
Query: 578 ILGYT 592
ILGYT
Sbjct: 277 ILGYT 281
>At1g13440.1 68414.m01570 glyceraldehyde 3-phosphate dehydrogenase,
cytosolic, putative / NAD-dependent
glyceraldehyde-3-phosphate dehydrogenase, putative very
strong similarity to SP|P25858 Glyceraldehyde
3-phosphate dehydrogenase, cytosolic (EC 1.2.1.12)
{Arabidopsis thaliana}; contains Pfam profiles PF02800:
Glyceraldehyde 3-phosphate dehydrogenase C-terminal
domain, PF00044: Glyceraldehyde 3-phosphate
dehydrogenase NAD binding domain
Length = 338
Score = 200 bits (487), Expect = 7e-52
Identities = 112/185 (60%), Positives = 130/185 (70%)
Frame = +2
Query: 38 TTTDKASAHLVGGAKKVIISAPSGPDAPMFVVGVNLEAYDPSYKVISNASCTTNCLAPLA 217
T DKA+AHL GGAKKV+ISAPS DAPMFVVGVN Y ++SNASCTTNCLAPLA
Sbjct: 107 TDKDKAAAHLKGGAKKVVISAPS-KDAPMFVVGVNEHEYKSDLDIVSNASCTTNCLAPLA 165
Query: 218 KVIHDNFEIIEGLMTTVHATTATQKEWLNWTLLGKTGXGGPAMAVGLRNQQNIIPASTGA 397
KVI+D F I+EGLMTTVH+ TATQK ++ K GG A + NIIP+STGA
Sbjct: 166 KVINDRFGIVEGLMTTVHSITATQKTVDGPSM--KDWRGGRAASF------NIIPSSTGA 217
Query: 398 LLKLSAKSFHKLNGKLTGMAFRVPVAXVSVVDLTVRLGXPASYEAIKQKVKEAA*GPLKG 577
K K LNGKLTGM+FRVP VSVVDLTVRL A+Y+ IK+ +KE + G +KG
Sbjct: 218 -AKAVGKVLPSLNGKLTGMSFRVPTVDVSVVDLTVRLEKAATYDEIKKAIKEESEGKMKG 276
Query: 578 ILGYT 592
ILGYT
Sbjct: 277 ILGYT 281
>At1g12900.1 68414.m01498 glyceraldehyde 3-phosphate dehydrogenase,
chloroplast, putative / NADP-dependent
glyceraldehydephosphate dehydrogenase, putative similar
to SP|P25856 Glyceraldehyde 3-phosphate dehydrogenase A,
chloroplast precursor (EC 1.2.1.13) (NADP-dependent
glyceraldehydephosphate dehydrogenase subunit A)
{Arabidopsis thaliana}; contains Pfam profiles PF02800:
Glyceraldehyde 3-phosphate dehydrogenase C-terminal
domain, PF00044: Glyceraldehyde 3-phosphate
dehydrogenase NAD binding domain
Length = 399
Score = 133 bits (322), Expect = 7e-32
Identities = 83/179 (46%), Positives = 98/179 (54%)
Frame = +2
Query: 47 DKASAHLVGGAKKVIISAPSGPDAPMFVVGVNLEAYDPSYKVISNASCTTNCLAPLAKVI 226
D A HL GAKKV+I+AP D P +VVGVN E Y +ISNASCTTNCLAP KV+
Sbjct: 169 DGAGKHLQAGAKKVLITAPGKGDIPTYVVGVNAELYSHEDTIISNASCTTNCLAPFVKVL 228
Query: 227 HDNFEIIEGLMTTVHATTATQKEWLNWTLLGKTGXGGPAMAVGLRNQQNIIPASTGALLK 406
F II+G MTT H+ T Q+ L A A L NI+P STGA K
Sbjct: 229 DQKFGIIKGTMTTTHSYTGDQR-----LLDASHRDLRRARAAAL----NIVPTSTGA-AK 278
Query: 407 LSAKSFHKLNGKLTGMAFRVPVAXVSVVDLTVRLGXPASYEAIKQKVKEAA*GPLKGIL 583
A L GKL G+A RVP VSVVDL V++ E + ++AA LKGIL
Sbjct: 279 AVALVLPNLKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRDAAEKELKGIL 337
>At3g26650.1 68416.m03330 glyceraldehyde 3-phosphate dehydrogenase
A, chloroplast (GAPA) / NADP-dependent
glyceraldehydephosphate dehydrogenase subunit A
identical to SP|P25856 Glyceraldehyde 3-phosphate
dehydrogenase A, chloroplast precursor (EC 1.2.1.13)
(NADP-dependent glyceraldehydephosphate dehydrogenase
subunit A) {Arabidopsis thaliana}
Length = 396
Score = 132 bits (318), Expect = 2e-31
Identities = 81/177 (45%), Positives = 98/177 (55%)
Frame = +2
Query: 53 ASAHLVGGAKKVIISAPSGPDAPMFVVGVNLEAYDPSYKVISNASCTTNCLAPLAKVIHD 232
A H+ GAKKVII+AP D P +VVGVN +AY +ISNASCTTNCLAP KV+
Sbjct: 168 AGKHIEAGAKKVIITAPGKGDIPTYVVGVNADAYSHDEPIISNASCTTNCLAPFVKVLDQ 227
Query: 233 NFEIIEGLMTTVHATTATQKEWLNWTLLGKTGXGGPAMAVGLRNQQNIIPASTGALLKLS 412
F II+G MTT H+ T Q+ L A A L NI+P STGA K
Sbjct: 228 KFGIIKGTMTTTHSYTGDQR-----LLDASHRDLRRARAAAL----NIVPTSTGA-AKAV 277
Query: 413 AKSFHKLNGKLTGMAFRVPVAXVSVVDLTVRLGXPASYEAIKQKVKEAA*GPLKGIL 583
A L GKL G+A RVP VSVVDL V++ E + +++A LKGIL
Sbjct: 278 ALVLPNLKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRDSAEKELKGIL 334
>At1g42970.1 68414.m04947 glyceraldehyde-3-phosphate dehydrogenase
B, chloroplast (GAPB) / NADP-dependent
glyceraldehydephosphate dehydrogenase subunit B
identical to SP|P25857 Glyceraldehyde 3-phosphate
dehydrogenase B, chloroplast precursor (EC 1.2.1.13)
(NADP-dependent glyceraldehydephosphate dehydrogenase
subunit B) {Arabidopsis thaliana}
Length = 447
Score = 124 bits (300), Expect = 3e-29
Identities = 79/180 (43%), Positives = 104/180 (57%), Gaps = 3/180 (1%)
Frame = +2
Query: 53 ASAHLVGGAKKVIISAPS-GPDAPMFVVGVNLEAYDPSY-KVISNASCTTNCLAPLAKVI 226
A H+ GA KVII+AP+ G D P +V+GVN + Y +ISNASCTTNCLAP AKV+
Sbjct: 188 AGKHIQAGASKVIITAPAKGADIPTYVMGVNEQDYGHDVANIISNASCTTNCLAPFAKVL 247
Query: 227 HDNFEIIEGLMTTVHATTATQKEWLNWTLLGKTGXGGPAMAVGLRNQQNIIPASTGALLK 406
+ F I++G MTT H+ T Q+ L A A L NI+P STGA K
Sbjct: 248 DEEFGIVKGTMTTTHSYTGDQR-----LLDASHRDLRRARAAAL----NIVPTSTGA-AK 297
Query: 407 LSAKSFHKLNGKLTGMAFRVPVAXVSVVDLTVRLGXPA-SYEAIKQKVKEAA*GPLKGIL 583
+ +L GKL G+A RVP VSVVDL + + + E + + ++AA GP+KGIL
Sbjct: 298 AVSLVLPQLKGKLNGIALRVPTPNVSVVDLVINVEKKGLTAEDVNEAFRKAANGPMKGIL 357
>At5g24710.1 68418.m02919 WD-40 repeat family protein contains 3
Pfam PF00400: WD domain, G-beta repeats;
Length = 1327
Score = 29.1 bits (62), Expect = 2.3
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 4/39 (10%)
Frame = +1
Query: 343 DGRGAQKSAK----HYSCFHWRAAKAVGKVIPQT*WKAY 447
DG +QKSA+ +Y + W + VG ++PQ W A+
Sbjct: 602 DGFSSQKSAESAPLNYQLYSWENFEPVGGMLPQPEWTAW 640
>At4g25820.1 68417.m03714 xyloglucan:xyloglucosyl transferase /
xyloglucan endotransglycosylase / endo-xyloglucan
transferase (XTR9) identical to xyloglucan
endotransglycosylase GI:4218963 from [Arabidopsis
thaliana]
Length = 287
Score = 27.9 bits (59), Expect = 5.4
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = +1
Query: 241 NY*RFDDYSACHYCHPERMVELDPSGKNWXW 333
+Y F+D S+C + V +P+ +W W
Sbjct: 217 SYRNFNDQSSCSRTSSSKWVTCEPNSNSWMW 247
>At1g74360.1 68414.m08615 leucine-rich repeat transmembrane protein
kinase, putative similar to brassinosteroid insensitive
1 GB:AAC49810 (putative receptor protein kinase);
contains Pfam profiles: PF00560 Leucine Rich Repeat (17
repeats), PF00069 Eukaryotic protein kinase domain
Length = 1106
Score = 27.9 bits (59), Expect = 5.4
Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 7/73 (9%)
Frame = -3
Query: 310 GPIQPFFLGGSSGMHCSHQTFNNFKVVVDDLCEGCEAVSCAGSI*NNF-------VGRIV 152
G IQ F + + ++ + NNF +DD+ GC + N F GR+V
Sbjct: 171 GDIQSSFPLFCNSLVVANLSTNNFTGRIDDIFNGCRNLKYVDFSSNRFSGEVWTGFGRLV 230
Query: 151 GFQVDTNYKHGSI 113
F V N+ G+I
Sbjct: 231 EFSVADNHLSGNI 243
>At3g16250.1 68416.m02050 ferredoxin-related contains Pfam profile:
PF00111 2Fe-2S iron-sulfur cluster binding domains
Length = 204
Score = 27.5 bits (58), Expect = 7.1
Identities = 17/67 (25%), Positives = 30/67 (44%)
Frame = +2
Query: 140 NLEAYDPSYKVISNASCTTNCLAPLAKVIHDNFEIIEGLMTTVHATTATQKEWLNWTLLG 319
N+E Y P K +SN + C + ++++ E++ T + +K NW L
Sbjct: 106 NIELYGPYSKPLSNCAGVGTCATCMVEIVNGK-ELLNP-RTDIEKEKLKRKP-KNWRLAC 162
Query: 320 KTGXGGP 340
+T G P
Sbjct: 163 QTNVGNP 169
>At1g51110.1 68414.m05746 plastid-lipid associated protein PAP /
fibrillin family protein similar to plastid-lipid
associated protein PAP2 [Brassica rapa] GI:14248550;
contains Pfam profile PF04755: PAP_fibrillin
Length = 409
Score = 27.5 bits (58), Expect = 7.1
Identities = 24/106 (22%), Positives = 46/106 (43%), Gaps = 6/106 (5%)
Frame = +2
Query: 203 LAPLAKVIHDNFEIIEGLMTTVHATTATQKEWLNWTLLGKTGXGGPAMAVGLRNQQNIIP 382
LA + DN+E++EG + ++ W+ G G ++ + NIIP
Sbjct: 280 LASNSNSAEDNYELLEGSWQMIWSSQMYTDSWIENAANGLMGRQIIEKDGRIKFEVNIIP 339
Query: 383 A----STGALLKLSAKSFH-KL-NGKLTGMAFRVPVAXVSVVDLTV 502
A G +K + ++ K+ + + G AF PV + ++L +
Sbjct: 340 AFRFSMKGKFIKSESSTYDLKMDDAAIIGGAFGYPVDITNNIELKI 385
>At5g47620.3 68418.m05877 heterogeneous nuclear ribonucleoprotein,
putative / hnRNP, putative
Length = 358
Score = 27.1 bits (57), Expect = 9.4
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +2
Query: 386 STGALLKLSAKSFHKLNGKLTGMAFRVP 469
S A+ K+ K+FH+LNGK+ + VP
Sbjct: 83 SEEAVDKVLQKTFHELNGKMVEVKLAVP 110
>At5g47620.2 68418.m05879 heterogeneous nuclear ribonucleoprotein,
putative / hnRNP, putative
Length = 431
Score = 27.1 bits (57), Expect = 9.4
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +2
Query: 386 STGALLKLSAKSFHKLNGKLTGMAFRVP 469
S A+ K+ K+FH+LNGK+ + VP
Sbjct: 156 SEEAVDKVLQKTFHELNGKMVEVKLAVP 183
>At5g47620.1 68418.m05878 heterogeneous nuclear ribonucleoprotein,
putative / hnRNP, putative
Length = 431
Score = 27.1 bits (57), Expect = 9.4
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +2
Query: 386 STGALLKLSAKSFHKLNGKLTGMAFRVP 469
S A+ K+ K+FH+LNGK+ + VP
Sbjct: 156 SEEAVDKVLQKTFHELNGKMVEVKLAVP 183
>At2g25320.1 68415.m03029 meprin and TRAF homology domain-containing
protein / MATH domain-containing protein weak similarity
to ubiquitin-specific protease 12 [Arabidopsis
thaliana] GI:11993471; contains Pfam profile PF00917:
MATH domain
Length = 1663
Score = 27.1 bits (57), Expect = 9.4
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +1
Query: 334 GARDGRGAQKSAKHYSCFHWR 396
G R+G GA+KS H F WR
Sbjct: 388 GGRNGAGARKSDGHMGKFTWR 408
>At1g53570.2 68414.m06081 mitogen-activated protein kinase kinase
kinase (MAPKKK), putative (MAP3Ka) identical to MEK
kinase (MAP3Ka)[Arabidopsis thaliana]
gi|4204912|gb|AAD10848
Length = 608
Score = 27.1 bits (57), Expect = 9.4
Identities = 16/55 (29%), Positives = 24/55 (43%)
Frame = +1
Query: 250 RFDDYSACHYCHPERMVELDPSGKNWXWGARDGRGAQKSAKHYSCFHWRAAKAVG 414
R DD + CHP P+ + G+R G G + S +S W+ K +G
Sbjct: 169 RNDDGRSSSECHPLPRPPTSPTSPSAVHGSRIGGGYETSPSGFST--WKKGKFLG 221
>At1g53570.1 68414.m06080 mitogen-activated protein kinase kinase
kinase (MAPKKK), putative (MAP3Ka) identical to MEK
kinase (MAP3Ka)[Arabidopsis thaliana]
gi|4204912|gb|AAD10848
Length = 609
Score = 27.1 bits (57), Expect = 9.4
Identities = 16/55 (29%), Positives = 24/55 (43%)
Frame = +1
Query: 250 RFDDYSACHYCHPERMVELDPSGKNWXWGARDGRGAQKSAKHYSCFHWRAAKAVG 414
R DD + CHP P+ + G+R G G + S +S W+ K +G
Sbjct: 169 RNDDGRSSSECHPLPRPPTSPTSPSAVHGSRIGGGYETSPSGFST--WKKGKFLG 221
>At1g18190.1 68414.m02262 expressed protein similar to golgin-84
{Homo sapiens} (GI:4191344)
Length = 668
Score = 27.1 bits (57), Expect = 9.4
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -3
Query: 91 DYFLGSTHQVSRSFISGCDTPVDSTTYSA 5
D F+ STH+ S +SG P+D + SA
Sbjct: 209 DIFVNSTHKESEKDVSGKTPPLDDSRRSA 237
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,994,089
Number of Sequences: 28952
Number of extensions: 269309
Number of successful extensions: 774
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 696
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 752
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1180950720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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