Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_A22
(519 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_02_0369 - 9505330-9505652,9507262-9507532,9507649-9507690,950... 53 2e-07
01_01_1054 + 8330081-8330137,8330229-8330321,8330445-8330504,833... 33 0.14
06_03_1309 + 29223197-29223240,29223358-29223592,29223695-292237... 33 0.18
01_05_0420 + 21969797-21970939,21971307-21971369,21971488-219716... 33 0.18
07_01_0281 - 2067696-2068862 32 0.24
03_06_0523 + 34499533-34499705,34499808-34499917,34500037-345002... 32 0.32
12_02_0008 + 12239759-12239923,12240404-12240443,12241278-122414... 31 0.42
11_04_0274 - 15667178-15667444,15668352-15668678,15669430-156695... 31 0.55
08_01_0181 + 1530623-1531626,1531723-1531902,1531998-1532177,153... 31 0.73
01_07_0321 + 42715969-42716233,42716320-42716399,42716545-427166... 31 0.73
06_03_0766 - 24425486-24426245,24430766-24430855,24430951-244310... 30 0.97
04_04_1500 + 34010819-34011016,34013267-34013308,34014195-340142... 30 0.97
01_06_1805 - 39999987-40000169,40000648-40000974,40001724-400020... 30 0.97
02_01_0703 + 5251901-5251950,5252783-5253554 30 1.3
06_02_0136 + 12195422-12195435,12196047-12196122,12196896-121977... 29 1.7
02_05_0300 + 27681204-27681656,27681745-27681840,27681933-276820... 29 1.7
06_03_0253 + 18753901-18754278,18754873-18754968,18755167-187553... 29 2.2
05_01_0578 + 5180538-5181385,5182480-5182595,5183397-5183605,518... 29 2.2
02_05_1041 - 33713561-33714564,33714844-33714904,33715640-337159... 29 2.2
08_01_0244 + 2016548-2017101,2017392-2019681,2019785-2019817 29 3.0
03_02_0709 + 10583621-10583626,10583711-10584712,10585304-10585669 29 3.0
07_03_1709 - 28873172-28873327,28873519-28873584,28874067-288741... 28 3.9
03_05_0799 + 27809301-27811550 28 3.9
03_02_0875 + 12038365-12039329,12039417-12039593,12039651-120398... 28 3.9
02_02_0559 - 11483798-11483988,11484076-11484163,11484288-114844... 28 3.9
03_02_0874 + 12017069-12018051,12018137-12018316,12018421-120186... 28 5.2
12_01_1022 - 10435409-10435564,10435950-10436219,10436820-104371... 27 6.8
10_08_0467 - 18143358-18143540,18144520-18144597,18144624-18145364 27 6.8
03_03_0244 - 15772156-15773964,15774190-15774711 27 6.8
01_05_0707 - 24468329-24468448,24468794-24468940,24469050-244691... 27 6.8
01_01_1096 - 8659091-8659459,8660730-8661050,8661416-8661694,866... 27 6.8
09_02_0357 + 7788946-7789326,7789620-7789997 27 9.0
06_03_1121 + 27767707-27768065,27768612-27769034,27770013-277701... 27 9.0
06_01_0784 - 5868545-5868888,5868990-5869085,5870313-5870394,587... 27 9.0
01_01_1089 - 8560008-8560220,8560456-8560977,8561095-8561283,856... 27 9.0
01_01_0623 + 4672581-4673413,4674274-4674389,4674694-4674902,467... 27 9.0
>02_02_0369 -
9505330-9505652,9507262-9507532,9507649-9507690,
9508416-9508458,9508853-9508860
Length = 228
Score = 52.8 bits (121), Expect = 2e-07
Identities = 21/44 (47%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Frame = +2
Query: 41 RYYCEYCDNMMV-SSPSIVKTHNKGIAHQKLVQEHYQQFKDAET 169
RYYC+YCD + SPS+ K HN G H+ V+ +YQQF++ +T
Sbjct: 3 RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQT 46
>01_01_1054 +
8330081-8330137,8330229-8330321,8330445-8330504,
8330703-8330975,8331107-8331181,8331269-8331325,
8331409-8331549,8331656-8331706,8331795-8331944,
8331974-8332057,8332171-8332273,8332451-8332527,
8333469-8333704,8334000-8334078,8335123-8335218,
8335735-8335828,8336325-8336423,8336663-8337453
Length = 871
Score = 33.1 bits (72), Expect = 0.14
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +2
Query: 23 ECNMGKRYYCEYCDNMMVSSPSIVKTHNKGIAHQK 127
E +GK YYC+YC+ +P+ K H G H +
Sbjct: 448 EMPLGK-YYCDYCEKQFQDTPAARKRHLDGAQHHR 481
>06_03_1309 +
29223197-29223240,29223358-29223592,29223695-29223783,
29223870-29223968,29224065-29224158,29224297-29224514,
29224861-29224967,29225298-29225472,29225596-29225743,
29226548-29226596,29228016-29228162,29229990-29229996,
29230417-29230482,29230773-29231991,29232073-29233149,
29233226-29233355,29233519-29233617,29233817-29233878,
29234429-29234533
Length = 1389
Score = 32.7 bits (71), Expect = 0.18
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Frame = +2
Query: 200 CSRFGQGSCQFGGICRYSH---YTREQLDELKEYVTTKNIIKQDFVQPSFQVLYQRLESE 370
C F +GSC++G CRY H + ++Q + K + QPSF +Q+ + +
Sbjct: 8 CRNFQRGSCKYGAQCRYLHASPHQQQQQQQAKPNPFGFGTGSRQQQQPSFGSQFQQQQQQ 67
Query: 371 K 373
+
Sbjct: 68 Q 68
>01_05_0420 +
21969797-21970939,21971307-21971369,21971488-21971616,
21972241-21972291,21972669-21972809,21972922-21973122,
21973201-21973419,21973582-21973700,21973772-21973862,
21975864-21975965,21976291-21976315,21976522-21976592
Length = 784
Score = 32.7 bits (71), Expect = 0.18
Identities = 20/61 (32%), Positives = 29/61 (47%)
Frame = +2
Query: 74 VSSPSIVKTHNKGIAHQKLVQEHYQQFKDAETILAEEKDKKPCSRFGQGSCQFGGICRYS 253
V P +VK + + H K Q + +F T L + K PC+ + +GSC G C Y
Sbjct: 426 VIKPKVVKVCHFYL-HGKCQQGNLCKFSHDTTPLTKSK---PCTHYARGSCLKGDDCPYD 481
Query: 254 H 256
H
Sbjct: 482 H 482
Score = 28.3 bits (60), Expect = 3.9
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +2
Query: 194 KPCSRFGQGSCQFGGICRYSHYT 262
K C + G CQ G +C++SH T
Sbjct: 433 KVCHFYLHGKCQQGNLCKFSHDT 455
>07_01_0281 - 2067696-2068862
Length = 388
Score = 32.3 bits (70), Expect = 0.24
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 200 CSRFGQGSCQFGGICRYSHYTREQ 271
CS++ +G C G CRYSH EQ
Sbjct: 327 CSKWRKGRCHNGAACRYSHGEEEQ 350
>03_06_0523 +
34499533-34499705,34499808-34499917,34500037-34500224,
34500984-34501451
Length = 312
Score = 31.9 bits (69), Expect = 0.32
Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 5/45 (11%)
Frame = +2
Query: 137 EHYQQFKDAETILAEEKDKKP-----CSRFGQGSCQFGGICRYSH 256
+H ++K E EE KK C F +G C G CRYSH
Sbjct: 110 DHVSKYKKKEEEDEEELQKKREARGVCYAFQKGECNRGASCRYSH 154
>12_02_0008 +
12239759-12239923,12240404-12240443,12241278-12241435,
12242400-12242462,12243149-12243268,12243388-12243684,
12245012-12245335,12246411-12246680
Length = 478
Score = 31.5 bits (68), Expect = 0.42
Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +2
Query: 164 ETILAEEKDKKPCSRFGQ-GSCQFGGICRYSHYTREQL 274
E I E D+ C + + G C+FG +C++ H+ +E+L
Sbjct: 336 ENIFPERPDQPECQFYMKTGDCKFGAVCKF-HHPKERL 372
>11_04_0274 -
15667178-15667444,15668352-15668678,15669430-15669563,
15669669-15669726,15669842-15669961,15670814-15670876,
15671388-15671539,15673002-15673116,15673907-15673981,
15674474-15674538,15675020-15675128
Length = 494
Score = 31.1 bits (67), Expect = 0.55
Identities = 12/38 (31%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = +2
Query: 164 ETILAEEKDKKPCSRFGQ-GSCQFGGICRYSHYTREQL 274
E+I E D+ C + + G C+FG +C++ H+ +E++
Sbjct: 353 ESIFPERPDQPECQFYMKTGDCKFGAVCKF-HHPKERI 389
>08_01_0181 +
1530623-1531626,1531723-1531902,1531998-1532177,
1532363-1532442,1532528-1532701,1533001-1533118,
1533223-1533301
Length = 604
Score = 30.7 bits (66), Expect = 0.73
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +2
Query: 191 KKPCSRFGQGSCQFGGICRYSHY 259
++PC F +G C+ G C YSH+
Sbjct: 214 RRPCHYFSKGICKNGQNCHYSHH 236
>01_07_0321 +
42715969-42716233,42716320-42716399,42716545-42716613,
42716710-42716791,42716902-42716996,42717129-42717203,
42717385-42717436,42717442-42717630,42717667-42717752,
42717827-42717902,42718001-42718164,42718307-42718426
Length = 450
Score = 30.7 bits (66), Expect = 0.73
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +2
Query: 41 RYYCEYCDNMMVSSPSIVKTHNKGIAHQKLVQEHYQQ 151
+Y CE CDN ++ + H +G H+K VQ Q+
Sbjct: 407 QYVCEACDNRVLRGTHEWEQHKQGRCHRKRVQRLKQK 443
>06_03_0766 -
24425486-24426245,24430766-24430855,24430951-24431070,
24431568-24431746,24432046-24432231,24432454-24432547,
24432679-24432743,24433652-24433987
Length = 609
Score = 30.3 bits (65), Expect = 0.97
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +2
Query: 194 KPCSRFGQGSCQFGGICRYSH 256
K C F +GSC FG C ++H
Sbjct: 577 KLCENFNKGSCTFGDRCHFAH 597
>04_04_1500 +
34010819-34011016,34013267-34013308,34014195-34014204,
34014526-34014586,34014621-34014678,34015266-34015412,
34015643-34016205,34018942-34019728
Length = 621
Score = 30.3 bits (65), Expect = 0.97
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +2
Query: 194 KPCSRFGQGSCQFGGICRYSHYTREQ 271
K C F +G+C FG C ++H EQ
Sbjct: 591 KLCENFVKGTCTFGDRCHFAHGENEQ 616
>01_06_1805 -
39999987-40000169,40000648-40000974,40001724-40002017,
40002112-40002231,40002714-40002776,40003150-40003310,
40003864-40004035
Length = 439
Score = 30.3 bits (65), Expect = 0.97
Identities = 10/32 (31%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = +2
Query: 164 ETILAEEKDKKPCSRFGQ-GSCQFGGICRYSH 256
E + E D+ C + + G C+FG +C++ H
Sbjct: 326 ENVFPERPDQPECQYYMKTGDCKFGAVCKFHH 357
>02_01_0703 + 5251901-5251950,5252783-5253554
Length = 273
Score = 29.9 bits (64), Expect = 1.3
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +2
Query: 194 KPCSRFGQGSCQFGGICRYSHYTRE 268
K C F +GSC FG C ++H E
Sbjct: 242 KLCENFTKGSCTFGDRCHFAHGENE 266
>06_02_0136 +
12195422-12195435,12196047-12196122,12196896-12197707,
12197941-12198010,12199469-12199557,12199633-12199666
Length = 364
Score = 29.5 bits (63), Expect = 1.7
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 200 CSRFGQGSCQFGGICRYSH 256
C+ + +GSC +G CRY H
Sbjct: 32 CTFYQKGSCSYGSRCRYDH 50
Score = 29.1 bits (62), Expect = 2.2
Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Frame = +2
Query: 209 FGQGSCQFGGICRYSHYTRE-QLDEL 283
FG G+C FG C Y H R+ +L+E+
Sbjct: 310 FGTGTCPFGSSCFYKHAYRDGRLEEV 335
>02_05_0300 +
27681204-27681656,27681745-27681840,27681933-27682022,
27682126-27682227,27682310-27682456,27683608-27683748,
27683749-27683808,27685133-27685230,27685308-27685410,
27685954-27686037
Length = 457
Score = 29.5 bits (63), Expect = 1.7
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +2
Query: 194 KPCSRFGQGSCQFGGICRYSH 256
+PC F G C +G CRY H
Sbjct: 112 RPCRYFLAGDCSYGEKCRYPH 132
>06_03_0253 +
18753901-18754278,18754873-18754968,18755167-18755376,
18756028-18756093,18756379-18756576,18756616-18756810,
18756968-18757014,18757147-18757234,18757331-18757681,
18758593-18759123
Length = 719
Score = 29.1 bits (62), Expect = 2.2
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 5/44 (11%)
Frame = +2
Query: 176 AEEKDKKP----CSRFGQ-GSCQFGGICRYSHYTREQLDELKEY 292
AE+ ++P CS + + GSC+FG CR++H R + +EY
Sbjct: 84 AEQFPRRPGEPDCSYYVKFGSCKFGMNCRFNHPPRMPVPPQQEY 127
>05_01_0578 + 5180538-5181385,5182480-5182595,5183397-5183605,
5184024-5184143,5184247-5184375,5184466-5184591,
5185550-5185667,5186471-5186680,5186788-5187100,
5187467-5187560,5187760-5187868,5188322-5188593,
5188684-5188811,5188977-5189211,5189794-5189982,
5190069-5190349,5190431-5190698,5190719-5190961,
5191598-5191680,5192484-5192493
Length = 1366
Score = 29.1 bits (62), Expect = 2.2
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = +2
Query: 275 DELKEYVTTKNIIKQDFVQPSFQVLYQRLESEKTQESHVSDENQYWLDDNGISHILPW 448
DEL T++ + D P + L + LE+ + +ESH Y++ N S PW
Sbjct: 862 DELPGPAPTQHSSQIDHSFPFLESLNEVLETNRAEESHCHVHRMYFMGPNTFSE--PW 917
>02_05_1041 -
33713561-33714564,33714844-33714904,33715640-33715951,
33716780-33716917
Length = 504
Score = 29.1 bits (62), Expect = 2.2
Identities = 27/100 (27%), Positives = 42/100 (42%), Gaps = 5/100 (5%)
Frame = +2
Query: 200 CSRFGQGSCQFGGICRYSHYTREQLDELKEYVTTK---NIIKQDFVQPS--FQVLYQRLE 364
C F Q C+FG CR SH + LK++ T+ +++ + S L++R E
Sbjct: 152 CKFFLQQRCRFGSNCRLSHGIVIPILSLKQFTPTRWQQSLVGSSILAASGHHSGLWRRAE 211
Query: 365 SEKTQESHVSDENQYWLDDNGISHILPWTYKSVFESYGEN 484
E + Q D+G S LP S+ E E+
Sbjct: 212 LESWDDD--LKVGQVVFQDDGSSARLPSDSLSISEYADES 249
>08_01_0244 + 2016548-2017101,2017392-2019681,2019785-2019817
Length = 958
Score = 28.7 bits (61), Expect = 3.0
Identities = 20/58 (34%), Positives = 25/58 (43%), Gaps = 4/58 (6%)
Frame = +2
Query: 197 PCSRFGQGSCQFGGICRYSHY--TREQLDELKEYVTTKNIIKQ--DFVQPSFQVLYQR 358
PC F G C+ G CR+ H R Q DE + + Q DF+ P Q Y R
Sbjct: 234 PCRDFVAGRCRRGSNCRFPHEDGVRRQFDEHYPVDSREKYGHQNRDFMDPREQDDYLR 291
Score = 28.7 bits (61), Expect = 3.0
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = +2
Query: 179 EEKDKKPCSRFGQGSCQFGGICRYSH 256
E + PC F +G C G CRY H
Sbjct: 313 EYRSTMPCHDFVKGRCSRGANCRYVH 338
Score = 28.3 bits (60), Expect = 3.9
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +2
Query: 188 DKKPCSRFGQGSCQFGGICRYSHYTREQ 271
+K PC F G C+ G C Y H Q
Sbjct: 375 NKNPCKFFANGGCRRGQNCPYLHEEASQ 402
>03_02_0709 + 10583621-10583626,10583711-10584712,10585304-10585669
Length = 457
Score = 28.7 bits (61), Expect = 3.0
Identities = 8/23 (34%), Positives = 17/23 (73%)
Frame = +2
Query: 200 CSRFGQGSCQFGGICRYSHYTRE 268
C+++ +G+C +G CR++H +E
Sbjct: 388 CNKWERGACPYGARCRFAHGLQE 410
>07_03_1709 -
28873172-28873327,28873519-28873584,28874067-28874127,
28875406-28875462,28876301-28876531,28876685-28876799,
28876897-28877136,28877222-28877316,28877406-28877585,
28877663-28877839,28877920-28878890
Length = 782
Score = 28.3 bits (60), Expect = 3.9
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +2
Query: 194 KPCSRFGQGSCQFGGICRYSH 256
KPC + +G C+ G CR+ H
Sbjct: 233 KPCLYYARGYCKNGSACRFVH 253
>03_05_0799 + 27809301-27811550
Length = 749
Score = 28.3 bits (60), Expect = 3.9
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +2
Query: 197 PCSRFGQGSCQFGGICRYSH 256
PC F +G C+ G +C Y+H
Sbjct: 311 PCPDFRKGVCRRGDMCEYAH 330
>03_02_0875 +
12038365-12039329,12039417-12039593,12039651-12039893,
12040045-12040124,12040242-12040508,12040599-12040710,
12040757-12041071,12041357-12041366
Length = 722
Score = 28.3 bits (60), Expect = 3.9
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +2
Query: 194 KPCSRFGQGSCQFGGICRYSH 256
KPC + +G C+ G CR+ H
Sbjct: 232 KPCLYYARGFCKNGSTCRFVH 252
>02_02_0559 -
11483798-11483988,11484076-11484163,11484288-11484405,
11484489-11484637,11484921-11484974,11485065-11485160,
11486092-11486242,11486300-11486382,11486577-11486695,
11487111-11487237
Length = 391
Score = 28.3 bits (60), Expect = 3.9
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +2
Query: 227 QFGGICRYSHYTREQLDELKEYVTTKNIIKQDFVQ 331
Q G+ HYTRE LDE+ T + ++ Q++V+
Sbjct: 180 QRAGVDLDVHYTREYLDEIVGSNTRRQMLYQEYVK 214
>03_02_0874 +
12017069-12018051,12018137-12018316,12018421-12018600,
12018718-12018797,12018999-12019259,12019360-12019474,
12019631-12019855,12020840-12020849
Length = 677
Score = 27.9 bits (59), Expect = 5.2
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +2
Query: 194 KPCSRFGQGSCQFGGICRYSH 256
KPC + +G C+ G CR+ H
Sbjct: 237 KPCLYYARGFCKNGSSCRFVH 257
>12_01_1022 -
10435409-10435564,10435950-10436219,10436820-10437125,
10437932-10438057,10439825-10439893,10440443-10440487,
10440717-10440776,10441527-10441589,10442186-10442266,
10442494-10442916
Length = 532
Score = 27.5 bits (58), Expect = 6.8
Identities = 10/24 (41%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
Frame = +2
Query: 188 DKKPCSRFGQ-GSCQFGGICRYSH 256
D+ C+ +G+ G C+FG C Y+H
Sbjct: 482 DQPVCTYYGRYGVCKFGPACAYNH 505
Score = 27.1 bits (57), Expect = 9.0
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = +2
Query: 218 GSCQFGGICRYSHYTREQLDELK 286
GSC+FG C+++H R++ +K
Sbjct: 121 GSCRFGMKCKFNHPARKKKSRVK 143
>10_08_0467 - 18143358-18143540,18144520-18144597,18144624-18145364
Length = 333
Score = 27.5 bits (58), Expect = 6.8
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +2
Query: 26 CNMGKRYYCEYCDNMMVSSPSIVKTHNKGIAHQKLVQEHYQ 148
C + K Y C + +S ++TH + QKL+QEH+Q
Sbjct: 128 CGIRKHSYLNLCGRL--ASCDCIRTHMEA---QKLIQEHHQ 163
>03_03_0244 - 15772156-15773964,15774190-15774711
Length = 776
Score = 27.5 bits (58), Expect = 6.8
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +2
Query: 101 HNKGIAHQKLVQEHYQQFKDAETILAEEKD 190
H K + KLV+E + + T+LA E+D
Sbjct: 272 HQKAVDELKLVKEEMRSTHEKHTVLASERD 301
>01_05_0707 -
24468329-24468448,24468794-24468940,24469050-24469103,
24469185-24469300,24470537-24470583,24470686-24470723,
24471050-24471268,24471504-24471602,24471675-24471728,
24472907-24473148,24474258-24474447
Length = 441
Score = 27.5 bits (58), Expect = 6.8
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +2
Query: 218 GSCQFGGICRYSHYTR 265
GSC+FG CR++H R
Sbjct: 280 GSCKFGSTCRFNHPDR 295
Score = 27.1 bits (57), Expect = 9.0
Identities = 12/49 (24%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = +2
Query: 140 HYQQFKDAETILAEEKDKKPCSRFGQ-GSCQFGGICRYSHYTREQLDEL 283
++++ + E E++ + C F + G C+FG C+++H +E+++ L
Sbjct: 141 NWKEAANVEESYPEQEGEPDCPFFMKTGKCKFGSKCKFNH-PKEKVNAL 188
>01_01_1096 -
8659091-8659459,8660730-8661050,8661416-8661694,
8661781-8661897,8662142-8662210,8663204-8663397,
8663552-8663633
Length = 476
Score = 27.5 bits (58), Expect = 6.8
Identities = 9/22 (40%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
Frame = +2
Query: 194 KPCSRFGQ-GSCQFGGICRYSH 256
+PC+ + Q G C++G C+Y H
Sbjct: 357 QPCAYYAQNGYCRYGVACKYDH 378
Score = 27.1 bits (57), Expect = 9.0
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +2
Query: 158 DAETILAEEKDKKPCSRFGQ-GSCQFGGICRYSH 256
DA L E ++ C + + G+C FG CRY+H
Sbjct: 51 DAAGRLPERPGEEDCVYYLRTGACGFGDRCRYNH 84
>09_02_0357 + 7788946-7789326,7789620-7789997
Length = 252
Score = 27.1 bits (57), Expect = 9.0
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +2
Query: 200 CSRFGQGSCQFGGICRYSHYTREQ 271
C ++ +G C G CRY+H +Q
Sbjct: 41 CMKWREGRCHNGVACRYAHGEEDQ 64
>06_03_1121 +
27767707-27768065,27768612-27769034,27770013-27770175,
27770271-27770381,27770895-27770963,27771117-27771203,
27771967-27772752
Length = 665
Score = 27.1 bits (57), Expect = 9.0
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +2
Query: 188 DKKPCSRFGQGSCQFGGICRYSH 256
D K C+ + G C G CRY H
Sbjct: 114 DVKECNMYKMGFCPNGPNCRYKH 136
>06_01_0784 -
5868545-5868888,5868990-5869085,5870313-5870394,
5870639-5870839,5871810-5871818
Length = 243
Score = 27.1 bits (57), Expect = 9.0
Identities = 12/54 (22%), Positives = 28/54 (51%)
Frame = +2
Query: 47 YCEYCDNMMVSSPSIVKTHNKGIAHQKLVQEHYQQFKDAETILAEEKDKKPCSR 208
+C++C + ++P ++TH G H+ V + + A+EK+++ +R
Sbjct: 12 WCDFCKIYIANNPLSIRTHEIGKRHKDNVTKRLATMQKEGA--AKEKEQQQAAR 63
>01_01_1089 - 8560008-8560220,8560456-8560977,8561095-8561283,
8561377-8561642,8561967-8562111,8562411-8562530,
8562611-8562930,8564161-8564341,8564434-8564580,
8565186-8565497,8566303-8566450,8566592-8566765,
8567385-8567446,8567499-8567571,8567628-8567683,
8568370-8568645,8569541-8569588,8569870-8569991,
8570258-8570413,8571037-8571079,8572624-8572701,
8572972-8573070,8573168-8573209,8573302-8573304
Length = 1264
Score = 27.1 bits (57), Expect = 9.0
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +2
Query: 188 DKKPCSRFGQGSCQFGGICRYSHYTREQLDELKEYVT 298
+ + C F GSC G C +SH +R K ++T
Sbjct: 982 ENEMCVFFLNGSCNRGDTCHFSHSSRAPRPICKFFLT 1018
>01_01_0623 + 4672581-4673413,4674274-4674389,4674694-4674902,
4675953-4676072,4676185-4676313,4676394-4676442,
4676899-4676970,4677574-4677707,4677798-4677915,
4678332-4678541,4678630-4678942,4679539-4679632,
4679854-4679962,4680243-4680514,4680597-4680724,
4680832-4681066,4681570-4681758,4681845-4682128,
4682218-4682398,4682486-4682728,4682904-4682986,
4683119-4683227,4687996-4688091,4688675-4688764,
4688881-4689129,4689233-4689412,4690179-4690250,
4691385-4691474,4691605-4691705,4691794-4691959
Length = 1757
Score = 27.1 bits (57), Expect = 9.0
Identities = 17/58 (29%), Positives = 26/58 (44%)
Frame = +2
Query: 275 DELKEYVTTKNIIKQDFVQPSFQVLYQRLESEKTQESHVSDENQYWLDDNGISHILPW 448
DEL T+ + D P + L + LE+ + +ESH Y++ N S PW
Sbjct: 900 DELPGPAPTQQGSQIDHSFPFLESLNEVLETNRAEESHGHVHRMYFMGPNTFSE--PW 955
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,810,315
Number of Sequences: 37544
Number of extensions: 275873
Number of successful extensions: 800
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 744
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 798
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1130733700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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