Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_A22
         (519 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U52002-6|AAB37732.1|  142|Caenorhabditis elegans Hypothetical pr...    45   4e-05
U41007-19|AAA82274.1|  432|Caenorhabditis elegans Hypothetical p...    36   0.013
Z74476-2|CAA98962.1|  200|Caenorhabditis elegans Hypothetical pr...    32   0.28 
AC024755-1|AAF59637.2|  369|Caenorhabditis elegans Hypothetical ...    31   0.65 
AL117204-23|CAB55137.1|  285|Caenorhabditis elegans Hypothetical...    29   1.5  
AL132862-20|CAD59165.1|  323|Caenorhabditis elegans Hypothetical...    29   2.0  
AL132862-19|CAB70231.2|  640|Caenorhabditis elegans Hypothetical...    29   2.0  
AC024826-3|AAP13746.1|  343|Caenorhabditis elegans Hypothetical ...    29   2.0  
AC024826-2|AAF60798.1|  413|Caenorhabditis elegans Hypothetical ...    29   2.0  
Z92826-9|CAD90172.1|  701|Caenorhabditis elegans Hypothetical pr...    29   2.6  
AL132860-33|CAB60507.2|  701|Caenorhabditis elegans Hypothetical...    29   2.6  
AF003130-13|AAK73876.1|  220|Caenorhabditis elegans Hypothetical...    29   2.6  
Z98866-11|CAB11564.2|  335|Caenorhabditis elegans Hypothetical p...    28   3.5  
Z50873-1|CAA90760.2|  961|Caenorhabditis elegans Hypothetical pr...    28   3.5  
X92564-1|CAA63314.1|  961|Caenorhabditis elegans LIN-2A protein.       28   3.5  
U62896-1|AAB17868.1|  335|Caenorhabditis elegans PIE-1 protein.        28   3.5  
U58763-2|AAK68876.1|  673|Caenorhabditis elegans Metaphase-to-an...    28   3.5  
AC025721-2|AAK29901.3|  976|Caenorhabditis elegans Hypothetical ...    27   6.1  
Z79695-4|CAB01969.3|  374|Caenorhabditis elegans Hypothetical pr...    27   8.0  
Z48009-11|CAA88088.2|  467|Caenorhabditis elegans Hypothetical p...    27   8.0  

>U52002-6|AAB37732.1|  142|Caenorhabditis elegans Hypothetical
           protein F08B4.7 protein.
          Length = 142

 Score = 44.8 bits (101), Expect = 4e-05
 Identities = 18/41 (43%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
 Frame = +2

Query: 41  RYYCEYCDNMMV-SSPSIVKTHNKGIAHQKLVQEHYQQFKD 160
           +YYC+YCD  +   SPS+ KTHN G  H+  V+  YQ++ +
Sbjct: 3   KYYCDYCDTFLTHDSPSVRKTHNGGRKHKDNVRMFYQKWME 43


>U41007-19|AAA82274.1|  432|Caenorhabditis elegans Hypothetical
           protein C33H5.17 protein.
          Length = 432

 Score = 36.3 bits (80), Expect = 0.013
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = +2

Query: 194 KPCSRFGQGSCQFGGICRYSHYTREQLDELKEY 292
           KPC+ F   SC+F   CR+SH    +L+ +++Y
Sbjct: 122 KPCTHFLSSSCKFNENCRFSHGYSVELERIQDY 154


>Z74476-2|CAA98962.1|  200|Caenorhabditis elegans Hypothetical
           protein W05B10.2 protein.
          Length = 200

 Score = 31.9 bits (69), Expect = 0.28
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +2

Query: 182 EKDKKPCSRFGQGSCQFGGICRYSH 256
           +K K  C  + +G C+FG  CR+SH
Sbjct: 133 KKSKFTCKNYLKGKCRFGDKCRFSH 157


>AC024755-1|AAF59637.2|  369|Caenorhabditis elegans Hypothetical
           protein Y34B4A.7 protein.
          Length = 369

 Score = 30.7 bits (66), Expect = 0.65
 Identities = 18/50 (36%), Positives = 28/50 (56%)
 Frame = -3

Query: 232 KLARTLTKSTAWLFIFLFGQYSFCIFKLLIMFLY*LLMSNPFIVCFNYGR 83
           K  RT++ +T   F F+F   SFCIF  L+++ Y  ++    +V   YGR
Sbjct: 18  KPPRTMSLTTKRYFAFIF---SFCIFMYLVLYFY--VLPAEVLVDEQYGR 62


>AL117204-23|CAB55137.1|  285|Caenorhabditis elegans Hypothetical
           protein Y116A8C.35 protein.
          Length = 285

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = +2

Query: 167 TILAEEKDKKPCSRFGQ-GSCQFGGICRYSHYT 262
           +I   EKDK  CS F + G+C+ G  C  +H+T
Sbjct: 15  SIYGTEKDKVNCSFFFKTGACRHGDKCSRAHHT 47


>AL132862-20|CAD59165.1|  323|Caenorhabditis elegans Hypothetical
           protein Y73F8A.25b protein.
          Length = 323

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
 Frame = +2

Query: 26  CNMGKRYY--CEYCDNMMVSSPSIVKTHNKGIAHQKLVQEH 142
           C + KRY   CE  ++ + S  +++K   + I H KL QEH
Sbjct: 132 CLLFKRYMRLCEGVNSTVHSLETVLKLSKEFIEHDKLTQEH 172


>AL132862-19|CAB70231.2|  640|Caenorhabditis elegans Hypothetical
           protein Y73F8A.25a protein.
          Length = 640

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
 Frame = +2

Query: 26  CNMGKRYY--CEYCDNMMVSSPSIVKTHNKGIAHQKLVQEH 142
           C + KRY   CE  ++ + S  +++K   + I H KL QEH
Sbjct: 449 CLLFKRYMRLCEGVNSTVHSLETVLKLSKEFIEHDKLTQEH 489


>AC024826-3|AAP13746.1|  343|Caenorhabditis elegans Hypothetical
           protein Y55F3AM.6b protein.
          Length = 343

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 16/42 (38%), Positives = 21/42 (50%)
 Frame = +2

Query: 218 GSCQFGGICRYSHYTREQLDELKEYVTTKNIIKQDFVQPSFQ 343
           G C +G  CR+ H TR + DEL    T +    Q  +Q S Q
Sbjct: 42  GKCSYGRACRFLH-TRPRNDELPSCSTPQTSQNQQNLQNSGQ 82


>AC024826-2|AAF60798.1|  413|Caenorhabditis elegans Hypothetical
           protein Y55F3AM.6a protein.
          Length = 413

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 16/42 (38%), Positives = 21/42 (50%)
 Frame = +2

Query: 218 GSCQFGGICRYSHYTREQLDELKEYVTTKNIIKQDFVQPSFQ 343
           G C +G  CR+ H TR + DEL    T +    Q  +Q S Q
Sbjct: 42  GKCSYGRACRFLH-TRPRNDELPSCSTPQTSQNQQNLQNSGQ 82


>Z92826-9|CAD90172.1|  701|Caenorhabditis elegans Hypothetical
           protein Y56A3A.1a protein.
          Length = 701

 Score = 28.7 bits (61), Expect = 2.6
 Identities = 15/43 (34%), Positives = 25/43 (58%)
 Frame = +2

Query: 86  SIVKTHNKGIAHQKLVQEHYQQFKDAETILAEEKDKKPCSRFG 214
           S +K  +K  +++KL+++  +QFKD E     E   KP S+ G
Sbjct: 69  SEIKDKDKLNSYRKLIEQRMEQFKDVE----RENKTKPHSKLG 107


>AL132860-33|CAB60507.2|  701|Caenorhabditis elegans Hypothetical
           protein Y56A3A.1a protein.
          Length = 701

 Score = 28.7 bits (61), Expect = 2.6
 Identities = 15/43 (34%), Positives = 25/43 (58%)
 Frame = +2

Query: 86  SIVKTHNKGIAHQKLVQEHYQQFKDAETILAEEKDKKPCSRFG 214
           S +K  +K  +++KL+++  +QFKD E     E   KP S+ G
Sbjct: 69  SEIKDKDKLNSYRKLIEQRMEQFKDVE----RENKTKPHSKLG 107


>AF003130-13|AAK73876.1|  220|Caenorhabditis elegans Hypothetical
           protein F55A12.10 protein.
          Length = 220

 Score = 28.7 bits (61), Expect = 2.6
 Identities = 17/81 (20%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
 Frame = +2

Query: 74  VSSPSIVKTHNKGIAHQKLVQEHYQQFKDAETILAEEKDKKPCSRFGQGSCQFGGICRYS 253
           V S  I K   + I  QK+ +    + ++ ++++ +E+ KK   +  +  CQ   +  + 
Sbjct: 69  VMSTDIHKRLARVIGFQKIQKSIQLKMENKKSVMRKEQTKKVEKKTEEMHCQLSKLTSFE 128

Query: 254 HYTREQLDEL-KEYVTTKNII 313
              R++L+++ +E    +N+I
Sbjct: 129 ENNRKKLEDIERENEKLRNLI 149


>Z98866-11|CAB11564.2|  335|Caenorhabditis elegans Hypothetical
           protein Y49E10.14 protein.
          Length = 335

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 10/45 (22%), Positives = 22/45 (48%)
 Frame = +2

Query: 137 EHYQQFKDAETILAEEKDKKPCSRFGQGSCQFGGICRYSHYTREQ 271
           +H+ + +           ++ C  F +G+C++G  CR+ H  + Q
Sbjct: 169 KHHDENRRPSNNHGSSNRRQICHNFERGNCRYGPRCRFIHVEQMQ 213


>Z50873-1|CAA90760.2|  961|Caenorhabditis elegans Hypothetical
           protein F17E5.1a protein.
          Length = 961

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 16/33 (48%), Positives = 22/33 (66%)
 Frame = +2

Query: 251 SHYTREQLDELKEYVTTKNIIKQDFVQPSFQVL 349
           SHYTR+ LD L +Y  T+ I+ +D V+P   VL
Sbjct: 124 SHYTRQLLDAL-DYCHTRKIVHRD-VRPHNLVL 154


>X92564-1|CAA63314.1|  961|Caenorhabditis elegans LIN-2A protein.
          Length = 961

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 16/33 (48%), Positives = 22/33 (66%)
 Frame = +2

Query: 251 SHYTREQLDELKEYVTTKNIIKQDFVQPSFQVL 349
           SHYTR+ LD L +Y  T+ I+ +D V+P   VL
Sbjct: 124 SHYTRQLLDAL-DYCHTRKIVHRD-VRPHNLVL 154


>U62896-1|AAB17868.1|  335|Caenorhabditis elegans PIE-1 protein.
          Length = 335

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 10/45 (22%), Positives = 22/45 (48%)
 Frame = +2

Query: 137 EHYQQFKDAETILAEEKDKKPCSRFGQGSCQFGGICRYSHYTREQ 271
           +H+ + +           ++ C  F +G+C++G  CR+ H  + Q
Sbjct: 169 KHHDENRRPSNNHGSSNRRQICHNFERGNCRYGPRCRFIHVEQMQ 213


>U58763-2|AAK68876.1|  673|Caenorhabditis elegans
           Metaphase-to-anaphase transitiondefect protein 3
           protein.
          Length = 673

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 14/48 (29%), Positives = 26/48 (54%)
 Frame = +2

Query: 242 CRYSHYTREQLDELKEYVTTKNIIKQDFVQPSFQVLYQRLESEKTQES 385
           C +  Y +E L+   E +  K    ++  +  F +LYQR+E +K +E+
Sbjct: 186 CLFLAYYQEHLENDAEGIERKTSFAEE--RSPFSLLYQRMEDKKLREN 231


>AC025721-2|AAK29901.3|  976|Caenorhabditis elegans Hypothetical
           protein Y48G8AL.10 protein.
          Length = 976

 Score = 27.5 bits (58), Expect = 6.1
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = +2

Query: 50  CEYCDNMMVSSPSIVKTHNKGIAHQKLVQEHYQQ 151
           C YCD   V   S+V    K    ++  QEH+ Q
Sbjct: 491 CTYCDKSFVLRASLVWHMQKHFEEEEQQQEHHHQ 524


>Z79695-4|CAB01969.3|  374|Caenorhabditis elegans Hypothetical
           protein F27D4.4a protein.
          Length = 374

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
 Frame = +2

Query: 155 KDAETILAEEKDKKP--CSRFGQGSCQFGGICRYSH 256
           K  E  +A++ D K   C  F QG C  G  C++SH
Sbjct: 79  KPVEQKVAKDVDPKSLLCVFFKQGLCGKGAKCKFSH 114


>Z48009-11|CAA88088.2|  467|Caenorhabditis elegans Hypothetical
           protein AH6.5 protein.
          Length = 467

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 16/71 (22%), Positives = 30/71 (42%), Gaps = 4/71 (5%)
 Frame = +2

Query: 194 KPCSRFGQGSCQFGGICRYSHYTREQLDELKEY----VTTKNIIKQDFVQPSFQVLYQRL 361
           K  +R G G C +G  C + H +  +   +  Y    V   + I +D+V   +Q  +   
Sbjct: 324 KNFARGGSGVCPYGLRCEFVHPSDTEFQNIPPYQRKMVEEHDSIPEDYVVARYQPRFMHT 383

Query: 362 ESEKTQESHVS 394
             + T  + V+
Sbjct: 384 SGKATTPTKVT 394


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,667,897
Number of Sequences: 27780
Number of extensions: 271730
Number of successful extensions: 878
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 847
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 877
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1007108110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)