Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_A22
         (519 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    25   0.47 
AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.     24   1.1  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    23   2.5  
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          22   3.3  
DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex det...    22   4.3  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    21   5.7  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   5.7  
L01588-1|AAA27735.1|   74|Apis mellifera zinc finger protein pro...    21   7.6  
AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic ac...    21   7.6  

>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 25.0 bits (52), Expect = 0.47
 Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
 Frame = -2

Query: 506 IFLYFVLSFHRSSQIH-SCKSMGECGIYHYRPTSIDFHQRHVILGFSHF 363
           IFLY  +S+H+   +    +     G+YH     +     H ILG S F
Sbjct: 249 IFLY--ISWHQKELVRRDSRRKNYGGVYHLDNHHVHHANHHAILGHSGF 295


>AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase
          protein.
          Length = 247

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +3

Query: 9  FGFVWNAIWVKGIIV 53
          FGF+ N++W  G++V
Sbjct: 34 FGFLDNSVWADGLLV 48


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 8/33 (24%), Positives = 18/33 (54%)
 Frame = -2

Query: 431 IYHYRPTSIDFHQRHVILGFSHFPVFGIELEMM 333
           +Y+Y  ++ DF +   ++G    P FG   +++
Sbjct: 18  LYYYLTSTFDFWKSRGVVGPKPVPFFGTTKDLI 50


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +3

Query: 141 IISSLKMQKLYWPKRKI 191
           I  +L M KL WPK+++
Sbjct: 211 IYYNLTMVKLNWPKKRV 227


>DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = -2

Query: 56  IHNNTFYPYCIPNKSKY 6
           IHNN  Y Y   NK  Y
Sbjct: 90  IHNNNNYKYNYNNKYNY 106


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +2

Query: 362 ESEKTQESHVSDENQY 409
           ES+ +  SH +DEN++
Sbjct: 227 ESDNSDYSHTTDENRH 242


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 11/32 (34%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
 Frame = +2

Query: 152  FKD--AETILAEEKDKKPCSRFGQGSCQFGGI 241
            F+D  A++I  + ++ +  S  G G CQ GG+
Sbjct: 947  FRDVIAKSISVKFQEGQTVSGGGMGGCQPGGV 978


>L01588-1|AAA27735.1|   74|Apis mellifera zinc finger protein
          protein.
          Length = 74

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = +2

Query: 38 KRYYCEYCDNMMV 76
          K Y+C +CD   V
Sbjct: 36 KPYHCSHCDRQFV 48


>AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha-3 protein.
          Length = 537

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 10/20 (50%), Positives = 10/20 (50%)
 Frame = -2

Query: 143 NVLVLTFDEQSLYCVF*LWT 84
           NV    FDEQS    F  WT
Sbjct: 161 NVEYFPFDEQSCIMKFGSWT 180


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,411
Number of Sequences: 438
Number of extensions: 3355
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14477538
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)