Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_A18
(507 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g09810.1 68414.m01101 expressed protein contains Pfam profile... 31 0.45
At1g67280.1 68414.m07657 lactoylglutathione lyase, putative / gl... 28 3.1
At1g11420.1 68414.m01312 agenet domain-containing protein contai... 28 3.1
At3g56410.2 68416.m06274 expressed protein 27 5.5
At3g56410.1 68416.m06273 expressed protein 27 5.5
At1g05830.1 68414.m00610 trithorax protein, putative / PHD finge... 27 5.5
At5g44700.1 68418.m05477 leucine-rich repeat transmembrane prote... 27 7.3
At2g32100.1 68415.m03924 ovate protein-related contains TIGRFAM ... 27 7.3
At1g60500.1 68414.m06811 dynamin family protein similar to RBTMx... 27 7.3
At3g54100.1 68416.m05981 expressed protein similar to axi 1 [Nic... 27 9.6
At3g42190.1 68416.m04340 hypothetical protein 27 9.6
At1g77510.1 68414.m09026 protein disulfide isomerase, putative s... 27 9.6
>At1g09810.1 68414.m01101 expressed protein contains Pfam profile
PF04146: YT521-B-like family
Length = 428
Score = 31.1 bits (67), Expect = 0.45
Identities = 14/49 (28%), Positives = 24/49 (48%)
Frame = +2
Query: 323 TMRTATKDQKDFSIDSEYSKHRQHQPNGYDYLENQLTKRMKLEKNDTKY 469
T+R +KD+ + E ++ HQ GY++ + +K N TKY
Sbjct: 363 TLRMDLFKEKDYDYEMEGNRRMNHQERGYNWNRSSNSKTQASLVNQTKY 411
>At1g67280.1 68414.m07657 lactoylglutathione lyase, putative /
glyoxalase I, putative similar to putative
lactoylglutathione lyase SP:Q39366, GI:2494843 from
[Brassica oleracea]
Length = 350
Score = 28.3 bits (60), Expect = 3.1
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +2
Query: 161 KESETEGYIAVNPYDSHYGDTHYYNYFADNWDL 259
+E T ++ P DSH+ YNY D +D+
Sbjct: 122 EEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDI 154
>At1g11420.1 68414.m01312 agenet domain-containing protein contains
Pfam PF05641: Agenet domain
Length = 604
Score = 28.3 bits (60), Expect = 3.1
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = -2
Query: 311 VKTEHRIQMQILSSDKYLDPNCRQNSCSNVYRHNANHT 198
+K I +LSSD+ PN +NS SN ++A HT
Sbjct: 367 LKLNSYINKTVLSSDR--TPNVVKNSASNAEENHAKHT 402
>At3g56410.2 68416.m06274 expressed protein
Length = 1535
Score = 27.5 bits (58), Expect = 5.5
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +2
Query: 89 DTIKPIVESVDPGRRYLVSSPSNGKESETEGYIAVNPYDSH 211
DT+ VD G + + +N ++S +EG+ +NP SH
Sbjct: 426 DTVLDSPSFVDYGMDFADETVTNHQDSASEGHEEINPDGSH 466
>At3g56410.1 68416.m06273 expressed protein
Length = 1488
Score = 27.5 bits (58), Expect = 5.5
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +2
Query: 89 DTIKPIVESVDPGRRYLVSSPSNGKESETEGYIAVNPYDSH 211
DT+ VD G + + +N ++S +EG+ +NP SH
Sbjct: 379 DTVLDSPSFVDYGMDFADETVTNHQDSASEGHEEINPDGSH 419
>At1g05830.1 68414.m00610 trithorax protein, putative / PHD finger
family protein / SET domain-containing protein similar
to trithorax-like protein 1 [Arabidopsis thaliana]
GI:12659210; contains Pfam domain, PF00628: PHD-finger
and PF00856: SET domain
Length = 1056
Score = 27.5 bits (58), Expect = 5.5
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +1
Query: 367 QRIFEAQATSTKWIRLS*KSID*KNETG 450
+++ A AT+ KW+RLS +D K+ G
Sbjct: 195 EKVVTASATAKKWVRLSYDGVDPKHFIG 222
>At5g44700.1 68418.m05477 leucine-rich repeat transmembrane protein
kinase, putative
Length = 1252
Score = 27.1 bits (57), Expect = 7.3
Identities = 12/47 (25%), Positives = 20/47 (42%)
Frame = +2
Query: 203 DSHYGDTHYYNYFADNWDLNIYPTTRFASEYGVQSLPSLFTMRTATK 343
++H GD N+D N T FA YG + ++++ K
Sbjct: 1092 EAHLGDFGLAKILTGNYDTNTESNTMFAGSYGYIAPEYAYSLKATEK 1138
>At2g32100.1 68415.m03924 ovate protein-related contains TIGRFAM
TIGR01568 : uncharacterized plant-specific domain
TIGR01568
Length = 244
Score = 27.1 bits (57), Expect = 7.3
Identities = 36/141 (25%), Positives = 52/141 (36%), Gaps = 11/141 (7%)
Frame = +2
Query: 83 YVDTIKPIVESVDPGRRYLVSSPSNGKESETEGYIAVNPYDSHYGD---THYYNYFADNW 253
Y I P V + RR+ SSP + +Y D T +
Sbjct: 88 YESDISPDVSAAFASRRFFFSSPGRSNAITDSPEPRSREFSDNYDDATITSTKKKKKKVY 147
Query: 254 DLNIYPTTRFASEYG------VQSLPSLFTMRTATKDQKDFSIDS-EYSKHRQHQPN-GY 409
D ++ TT G V S L R + ++ D +ID+ E S+ PN GY
Sbjct: 148 DNSVTTTTTRLISGGTAVTQHVDSPDPLTDFRRSMQEMIDAAIDAGELSR----DPNDGY 203
Query: 410 DYLENQLTKRMKLEKNDTKYF 472
D+L+ L + L DT F
Sbjct: 204 DFLDELLLTYLSLNPADTHKF 224
>At1g60500.1 68414.m06811 dynamin family protein similar to RBTMx2
[Oncorhynchus mykiss] GI:1399452; contains Pfam profiles
PF01031: Dynamin central region, PF00350: Dynamin
family, PF02212: Dynamin GTPase effector domain
Length = 669
Score = 27.1 bits (57), Expect = 7.3
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +2
Query: 38 SNSDFVAYQLEYVKLYVDTIKPIVESVD 121
SN D V+ + + Y D I+P++++VD
Sbjct: 24 SNKDVVSVEAPIISSYNDRIRPLLDTVD 51
>At3g54100.1 68416.m05981 expressed protein similar to axi 1
[Nicotiana tabacum] GI:559921; contains Pfam profile
PF03138: Plant protein family
Length = 638
Score = 26.6 bits (56), Expect = 9.6
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +2
Query: 83 YVDTI-KPIVESVDPGRRYLVSSPSNGKESETEGYIAVNPYDSHYGDTHYYNYFA 244
Y +TI +PIV S D L + G++S + + SHY HY+ +++
Sbjct: 37 YCNTINQPIVGSTD-----LDGGDATGQDSSPSSESSASSTGSHYHHDHYHRFYS 86
>At3g42190.1 68416.m04340 hypothetical protein
Length = 695
Score = 26.6 bits (56), Expect = 9.6
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = +2
Query: 140 VSSPSNGKESETEGYIAVNPYDSHYGDTHYYNYFADNWDLNIYPTTRFASE 292
VSS G ESE +G + + + GD ++ +++ PTT A+E
Sbjct: 218 VSSGVGGSESERDGVVPMEEGNLTEGDVVNNQQAGNDAGVDVAPTTEAATE 268
>At1g77510.1 68414.m09026 protein disulfide isomerase, putative
similar to protein disulfide isomerase precursor
GB:P29828 GI:4704766 [Medicago sativa]; Pfam HMM hit:
PF00085 Thioredoxins
Length = 508
Score = 26.6 bits (56), Expect = 9.6
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +2
Query: 281 FASEYGVQSLPSLFTMRTATKDQKDFS 361
FA+EY +Q P+L +R K +D++
Sbjct: 97 FANEYKIQGFPTLKILRNGGKSVQDYN 123
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,946,110
Number of Sequences: 28952
Number of extensions: 192475
Number of successful extensions: 570
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 563
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 570
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 908059136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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