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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_A17
         (323 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g22320.1 68418.m02604 leucine-rich repeat family protein cont...    37   0.004
At4g16900.1 68417.m02551 disease resistance protein (TIR-NBS-LRR...    33   0.058
At5g45240.1 68418.m05552 disease resistance protein (TIR-NBS-LRR...    31   0.18 
At3g44670.1 68416.m04804 disease resistance protein RPP1-Ws[A,C]...    31   0.23 
At3g50690.1 68416.m05546 leucine-rich repeat family protein            29   0.71 
At3g10310.1 68416.m01237 kinesin motor protein-related similar t...    29   0.71 
At1g63810.1 68414.m07221 nucleolar RNA-associated family protein...    29   0.94 
At4g08450.1 68417.m01393 disease resistance protein (TIR-NBS-LRR...    28   1.2  
At1g60090.1 68414.m06770 glycosyl hydrolase family 1 protein con...    28   1.2  
At1g32780.1 68414.m04041 alcohol dehydrogenase, putative similar...    28   1.2  
At2g18465.1 68415.m02150 DNAJ heat shock N-terminal domain-conta...    28   1.6  
At5g05290.1 68418.m00568 expansin, putative (EXP2) identical to ...    27   2.2  
At2g23950.1 68415.m02860 leucine-rich repeat family protein / pr...    27   2.2  
At5g46520.1 68418.m05728 disease resistance protein (TIR-NBS-LRR...    27   2.9  
At5g46510.1 68418.m05727 disease resistance protein (TIR-NBS-LRR...    27   2.9  
At4g20940.1 68417.m03034 leucine-rich repeat family protein cont...    27   2.9  
At1g31540.1 68414.m03869 disease resistance protein (TIR-NBS-LRR...    27   2.9  
At4g16940.1 68417.m02555 disease resistance protein (TIR-NBS-LRR...    27   3.8  
At4g10780.1 68417.m01758 disease resistance protein (CC-NBS-LRR ...    27   3.8  
At2g26450.1 68415.m03173 pectinesterase family protein contains ...    26   5.0  
At1g27180.1 68414.m03311 disease resistance protein (TIR-NBS-LRR...    26   5.0  
At1g27170.1 68414.m03310 disease resistance protein (TIR-NBS-LRR...    26   5.0  
At3g44400.1 68416.m04770 disease resistance protein (TIR-NBS-LRR...    26   6.7  
At3g26280.1 68416.m03279 cytochrome P450 family protein identica...    26   6.7  
At5g48360.1 68418.m05975 formin homology 2 domain-containing pro...    25   8.8  
At5g04220.2 68418.m00411 C2 domain-containing protein (sytC) GC ...    25   8.8  
At5g04220.1 68418.m00410 C2 domain-containing protein (sytC) GC ...    25   8.8  
At3g19700.1 68416.m02495 leucine-rich repeat transmembrane prote...    25   8.8  
At2g48030.1 68415.m06012 endonuclease/exonuclease/phosphatase fa...    25   8.8  

>At5g22320.1 68418.m02604 leucine-rich repeat family protein
           contains leucine rich repeat (LRR) domains, Pfam:PF00560
          Length = 452

 Score = 36.7 bits (81), Expect = 0.004
 Identities = 28/83 (33%), Positives = 47/83 (56%)
 Frame = +1

Query: 73  KRLVLELRGRNPSQVKELNLDNCRSTNIVGLSDQYTNLEILSLNNAGLTNLKGFPSICPS 252
           ++++ E +  +P  VKELNL +   T++  LS ++ NLE L L    LT+L+G  S C +
Sbjct: 7   EQVLKEKKTNDPDSVKELNLGHKALTDVSCLS-KFKNLEKLDLRFNNLTDLQGLKS-CVN 64

Query: 253 *ENWSYLTTEYQTGLNFLSGLLK 321
            +  S +  + Q+ LN +  L K
Sbjct: 65  LKWLSVVENKLQS-LNGIEALTK 86


>At4g16900.1 68417.m02551 disease resistance protein (TIR-NBS-LRR
           class), putative domain signature TIR-NBS-LRR exists,
           suggestive of a disease resistance protein.
          Length = 1072

 Score = 32.7 bits (71), Expect = 0.058
 Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
 Frame = +1

Query: 103 NPSQVKELNLDNCRSTNIVGLSDQYTN-LEILSLNNAGLTNLKGFPS 240
           N   ++ELNL  CRS  +V LS    N ++++ L+  G T L+ FP+
Sbjct: 602 NARNLEELNLSECRS--LVTLSSSIQNAIKLIYLDMRGCTKLESFPT 646


>At5g45240.1 68418.m05552 disease resistance protein (TIR-NBS-LRR
           class), putative domain signature TIR-NBS-LRR exists,
           suggestive of a disease resistance protein.
          Length = 812

 Score = 31.1 bits (67), Expect = 0.18
 Identities = 14/45 (31%), Positives = 27/45 (60%)
 Frame = +1

Query: 73  KRLVLELRGRNPSQVKELNLDNCRSTNIVGLSDQYTNLEILSLNN 207
           ++LV  +   N   ++E+NL +C++ +    +DQ  NL+ L L+N
Sbjct: 484 EKLVQVVELSNACYLEEINLQDCKNLDTFPDTDQLENLQFLDLSN 528


>At3g44670.1 68416.m04804 disease resistance protein
           RPP1-Ws[A,C]-like (TIR-NBS-LRR class), putative domain
           signature TIR-NBS-LRR exists, suggestive of a disease
           resistance protein. Closest Col-0 homolog to both RPP1
           Ws-A and RPP1 Ws-C
          Length = 872

 Score = 30.7 bits (66), Expect = 0.23
 Identities = 20/46 (43%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
 Frame = +1

Query: 109 SQVKELNLDNCRSTNIVGLSDQYTNLEIL-SLNNAGLTNLKGFPSI 243
           + +KE +L NC  +N+V L     NL+ L +LN AG + LK FP I
Sbjct: 533 TNLKEFDLSNC--SNLVELPINI-NLKFLDTLNLAGCSQLKSFPEI 575



 Score = 26.2 bits (55), Expect = 5.0
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = +1

Query: 103 NPSQVKELNLDNCRSTNIVGLSDQYTNLEILSLNN 207
           N ++++EL L+NC S   +  S    NL+ LSL N
Sbjct: 437 NATKLEELYLENCSSLEKLPPSINANNLQQLSLIN 471


>At3g50690.1 68416.m05546 leucine-rich repeat family protein 
          Length = 447

 Score = 29.1 bits (62), Expect = 0.71
 Identities = 15/26 (57%), Positives = 20/26 (76%)
 Frame = +3

Query: 225 KRFPKHLPKLRKLELSDNRISNGAEF 302
           ++FP+ L  L+KL LSDNRI+ G EF
Sbjct: 64  EQFPR-LGNLQKLILSDNRITVGLEF 88


>At3g10310.1 68416.m01237 kinesin motor protein-related similar to
           carboxy-terminal kinesin 2 GB:P79955 [Xenopus laevis]
          Length = 897

 Score = 29.1 bits (62), Expect = 0.71
 Identities = 17/54 (31%), Positives = 29/54 (53%)
 Frame = +1

Query: 100 RNPSQVKELNLDNCRSTNIVGLSDQYTNLEILSLNNAGLTNLKGFPSICPS*EN 261
           R P +++ L+++NC ST    L D+      L+   A + +L+G P  C + EN
Sbjct: 683 RTPPRLRRLSIENCSSTK-ANLEDRRGIKSPLASRRAQILSLEG-PMSCKNEEN 734


>At1g63810.1 68414.m07221 nucleolar RNA-associated family protein /
           Nrap family protein contains Pfam profile PF03813: Nrap
           protein; similar to nucleolar RNA-associated protein
           alpha (GI:18539461) [Mus musculus]
          Length = 1053

 Score = 28.7 bits (61), Expect = 0.94
 Identities = 11/53 (20%), Positives = 30/53 (56%)
 Frame = +1

Query: 79  LVLELRGRNPSQVKELNLDNCRSTNIVGLSDQYTNLEILSLNNAGLTNLKGFP 237
           ++++L G     + +L ++  +S  ++ +++++  L  ++L    L N+KG P
Sbjct: 617 VMIQLEGSGNWPMDDLAVEKTKSAFLLKIAERWVKLLFVTLQTINLQNVKGIP 669


>At4g08450.1 68417.m01393 disease resistance protein (TIR-NBS-LRR
           class), putative domain signature TIR-NBS-LRR exists,
           suggestive of a disease resistance protein.
          Length = 1234

 Score = 28.3 bits (60), Expect = 1.2
 Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
 Frame = +1

Query: 124 LNLDNCRSTNIVGLSDQYTNLE-ILSLNNAGLTNLKGFPS 240
           LNL+ C S  IV L     NL  ++ L+ +G TNL+ FP+
Sbjct: 796 LNLEQCIS--IVELPSSIRNLHNLIELDMSGCTNLETFPT 833


>At1g60090.1 68414.m06770 glycosyl hydrolase family 1 protein
           contains Pfam PF00232 : Glycosyl hydrolase family 1
           domain; TIGRFAM TIGR01233: 6-phospho-beta-galactosidase;
           similar to hydroxyisourate hydrolase (GI:19569603)
           [Glycine max]
          Length = 512

 Score = 28.3 bits (60), Expect = 1.2
 Identities = 11/38 (28%), Positives = 24/38 (63%)
 Frame = +1

Query: 190 ILSLNNAGLTNLKGFPSICPS*ENWSYLTTEYQTGLNF 303
           ++  + A +TN+K  PS+  + + +SY+ T++   L+F
Sbjct: 325 VIHYHAASVTNIKSKPSLSGNPDFYSYMETDFGKSLDF 362


>At1g32780.1 68414.m04041 alcohol dehydrogenase, putative similar to
           alcohol dehydrogenase GB:CAA37333 GI:297178 from
           [Solanum tuberosum]; contains Pfam zinc-binding
           dehydrogenase domain PF00107
          Length = 394

 Score = 28.3 bits (60), Expect = 1.2
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -3

Query: 87  QDQPLFHFCKSVEFTLYVTVDSS 19
           Q QP++HF  +  FT Y  +DS+
Sbjct: 147 QSQPIYHFLNTSTFTEYTVLDSA 169


>At2g18465.1 68415.m02150 DNAJ heat shock N-terminal
           domain-containing protein low similarity to dnaJ
           [Clostridium acetobutylicum] GI:144832; contains Pfam
           profile PF00226 DnaJ domain
          Length = 268

 Score = 27.9 bits (59), Expect = 1.6
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +2

Query: 5   DKYFIDESTVTYSVNSTDLQKWKRGWSW 88
           +++       +YS +ST   +W+ GWSW
Sbjct: 155 ERWTAQSQKASYSKDSTAGFEWREGWSW 182


>At5g05290.1 68418.m00568 expansin, putative (EXP2) identical to
           expansin At-EXP2 [Arabidopsis thaliana]
           gi|1041708|gb|AAB38073; alpha-expansin gene family,
           PMID:11641069
          Length = 255

 Score = 27.5 bits (58), Expect = 2.2
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +2

Query: 38  YSVNSTDLQKWKRGWSWNYGG 100
           YS+NS D   W+RG +  YGG
Sbjct: 22  YSINSDDNGGWERGHATFYGG 42


>At2g23950.1 68415.m02860 leucine-rich repeat family protein /
           protein kinase family protein contains Pfam domains
           PF00560: Leucine Rich Repeat and PF00069: Protein kinase
           domain
          Length = 634

 Score = 27.5 bits (58), Expect = 2.2
 Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
 Frame = +1

Query: 112 QVKELNLDNCR-STNIVGLSDQYTNLEILSLNNAGLTNLKGFPSICPS*ENWSYLTTEY 285
           +++ L+L N R S  I G  +Q +NL+ L LNN  L+    FP+      + S+L   Y
Sbjct: 123 KLQTLDLSNNRFSGEIPGSVNQLSNLQYLRLNNNSLSG--PFPASLSQIPHLSFLDLSY 179


>At5g46520.1 68418.m05728 disease resistance protein (TIR-NBS-LRR
           class), putative domain signature TIR-NBS-LRR exists,
           suggestive of a disease resistance protein.
          Length = 1298

 Score = 27.1 bits (57), Expect = 2.9
 Identities = 20/56 (35%), Positives = 26/56 (46%)
 Frame = +1

Query: 130 LDNCRSTNIVGLSDQYTNLEILSLNNAGLTNLKGFPSICPS*ENWSYLTTEYQTGL 297
           LD C   N+  L        ++SLN  G + LK FP I     N  YL  + QTG+
Sbjct: 839 LDICYCRNLESLPTGINLESLVSLNLFGCSRLKRFPDIS---TNIKYLDLD-QTGI 890


>At5g46510.1 68418.m05727 disease resistance protein (TIR-NBS-LRR
           class), putative domain signature TIR-NBS-LRR exists,
           suggestive of a disease resistance protein.
          Length = 1353

 Score = 27.1 bits (57), Expect = 2.9
 Identities = 20/56 (35%), Positives = 26/56 (46%)
 Frame = +1

Query: 130 LDNCRSTNIVGLSDQYTNLEILSLNNAGLTNLKGFPSICPS*ENWSYLTTEYQTGL 297
           LD C   N+  L        ++SLN  G + LK FP I     N  YL  + QTG+
Sbjct: 800 LDICYCRNLESLPTGINLESLVSLNLFGCSRLKRFPDIS---TNIKYLDLD-QTGI 851


>At4g20940.1 68417.m03034 leucine-rich repeat family protein
           contains leucine rich-repeat (LRR) domains Pfam:PF00560,
           INTERPRO:IPR001611; contains similarity to leucine-rich
           repeat receptor-like protein kinase INRPK1 [Ipomoea nil]
           gi|14495542|gb|AAB36558
          Length = 977

 Score = 27.1 bits (57), Expect = 2.9
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +3

Query: 225 KRFPKHLPKLRKLELSDNRI 284
           +R P H PKLR L++S N +
Sbjct: 428 ERIPTHYPKLRVLDISSNSL 447


>At1g31540.1 68414.m03869 disease resistance protein (TIR-NBS-LRR
           class), putative domain signature TIR-NBS-LRR exists,
           suggestive of a disease resistance protein.
          Length = 776

 Score = 27.1 bits (57), Expect = 2.9
 Identities = 19/56 (33%), Positives = 29/56 (51%)
 Frame = +1

Query: 73  KRLVLELRGRNPSQVKELNLDNCRSTNIVGLSDQYTNLEILSLNNAGLTNLKGFPS 240
           K L +   G N   +  LNL +C  + +       TN+ +L+LN   LTN++ FPS
Sbjct: 686 KSLKILPTGFNLKSLDRLNLYHC--SKLKTFPKFSTNISVLNLN---LTNIEDFPS 736


>At4g16940.1 68417.m02555 disease resistance protein (TIR-NBS-LRR
           class), putative domain signature TIR-NBS-LRR exists,
           suggestive of a disease resistance protein.
          Length = 1103

 Score = 26.6 bits (56), Expect = 3.8
 Identities = 20/65 (30%), Positives = 31/65 (47%)
 Frame = +1

Query: 112 QVKELNLDNCRSTNIVGLSDQYTNLEILSLNNAGLTNLKGFPSICPS*ENWSYLTTEYQT 291
           ++K ++L  C +   +    + TNLEIL L+N    +L   PS   + +    L  E  T
Sbjct: 759 KLKRVDLSECENMIEIPDLSKATNLEILDLSNC--KSLVMLPSTIGNLQKLYTLNMEECT 816

Query: 292 GLNFL 306
           GL  L
Sbjct: 817 GLKVL 821


>At4g10780.1 68417.m01758 disease resistance protein (CC-NBS-LRR
           class), putative domain signature CC-NBS-LRR exists,
           suggestive of a disease resistance protein.
          Length = 892

 Score = 26.6 bits (56), Expect = 3.8
 Identities = 16/64 (25%), Positives = 29/64 (45%)
 Frame = +1

Query: 130 LDNCRSTNIVGLSDQYTNLEILSLNNAGLTNLKGFPSICPS*ENWSYLTTEYQTGLNFLS 309
           LD   +  + GL +Q + L  L   +   TN++G P+     +   +L  E    L  ++
Sbjct: 566 LDLSENHQLDGLPEQISELVALRYLDLSHTNIEGLPACLQDLKTLIHLNLECMRRLGSIA 625

Query: 310 GLLK 321
           G+ K
Sbjct: 626 GISK 629


>At2g26450.1 68415.m03173 pectinesterase family protein contains
           Pfam profiles: PF01095 pectinesterase,PF04043 plant
           invertase/pectin methylesterase inhibitor
          Length = 614

 Score = 26.2 bits (55), Expect = 5.0
 Identities = 10/33 (30%), Positives = 15/33 (45%)
 Frame = +1

Query: 190 ILSLNNAGLTNLKGFPSICPS*ENWSYLTTEYQ 288
           + SLN   +T +  F  + P  E+W      YQ
Sbjct: 190 VASLNKINVTEVNSFEKVVPDLESWLSAVMSYQ 222


>At1g27180.1 68414.m03311 disease resistance protein (TIR-NBS-LRR
            class), putative domain signature TIR-NBS-LRR exists,
            suggestive of a disease resistance protein.
          Length = 1556

 Score = 26.2 bits (55), Expect = 5.0
 Identities = 22/65 (33%), Positives = 32/65 (49%)
 Frame = +1

Query: 106  PSQVKELNLDNCRSTNIVGLSDQYTNLEILSLNNAGLTNLKGFPSICPS*ENWSYLTTEY 285
            P ++++LNL NC S  +  +SD     E+  L +  LTN      I P  E+ + L   Y
Sbjct: 1303 PCKLEQLNLANCFS--LESVSDL---SELTILTDLNLTNCAKVVDI-PGLEHLTALKRLY 1356

Query: 286  QTGLN 300
             TG N
Sbjct: 1357 MTGCN 1361


>At1g27170.1 68414.m03310 disease resistance protein (TIR-NBS-LRR
            class), putative domain signature TIR-NBS-LRR exists,
            suggestive of a disease resistance protein.
          Length = 1544

 Score = 26.2 bits (55), Expect = 5.0
 Identities = 22/65 (33%), Positives = 32/65 (49%)
 Frame = +1

Query: 106  PSQVKELNLDNCRSTNIVGLSDQYTNLEILSLNNAGLTNLKGFPSICPS*ENWSYLTTEY 285
            P ++++LNL NC S  +  +SD     E+  L +  LTN      I P  E+ + L   Y
Sbjct: 1289 PCKLEQLNLANCFS--LESVSDL---SELTILTDLNLTNCAKVVDI-PGLEHLTALKRLY 1342

Query: 286  QTGLN 300
             TG N
Sbjct: 1343 MTGCN 1347


>At3g44400.1 68416.m04770 disease resistance protein (TIR-NBS-LRR
           class), putative domain signature TIR-NBS-LRR exists,
           suggestive of a disease resistance protein.
          Length = 1007

 Score = 25.8 bits (54), Expect = 6.7
 Identities = 13/35 (37%), Positives = 22/35 (62%)
 Frame = +1

Query: 103 NPSQVKELNLDNCRSTNIVGLSDQYTNLEILSLNN 207
           N +++++L+L+NC S   +  S    NL+ LSL N
Sbjct: 738 NATKLEKLDLENCSSLVKLPPSINANNLQELSLRN 772


>At3g26280.1 68416.m03279 cytochrome P450 family protein identical
           to cytochrome P450 monooxygenase (CYP71B4) GB:D78603
           [Arabidopsis thaliana] (Plant Mol. Biol. 37 (1), 39-52
           (1998))
          Length = 504

 Score = 25.8 bits (54), Expect = 6.7
 Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
 Frame = +3

Query: 63  RNGKEAGLGITGEESFTGQRIKSRQLSEY*HCGAF*SIYEP*NS-QLK*CWSYKSKRFPK 239
           RNGK+ G G+ G+E    +++  R+        +F  I E  N   +K      SK+ P 
Sbjct: 110 RNGKDIGFGVYGDEWRELRKLSVREFFSVKKVQSFKYIREEENDLMIKKLKELASKQSPV 169

Query: 240 HLPKL 254
            L K+
Sbjct: 170 DLSKI 174


>At5g48360.1 68418.m05975 formin homology 2 domain-containing
           protein / FH2 domain-containing protein contains formin
           homology 2 domain, Pfam:PF02181
          Length = 782

 Score = 25.4 bits (53), Expect = 8.8
 Identities = 14/48 (29%), Positives = 24/48 (50%)
 Frame = +1

Query: 79  LVLELRGRNPSQVKELNLDNCRSTNIVGLSDQYTNLEILSLNNAGLTN 222
           L L L GR+  Q + L   +C S+N     D+ +++   + N A  T+
Sbjct: 119 LALFLYGRHRGQTRHLKNSHCSSSNTSSYGDEQSHI-TTNFNMAATTS 165


>At5g04220.2 68418.m00411 C2 domain-containing protein (sytC) GC
           donor splice site at exon 3; similar to Ca2+-dependent
           lipid-binding protein (CLB1) GI:2789434 from
           [Lycopersicon esculentum]
          Length = 540

 Score = 25.4 bits (53), Expect = 8.8
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = +1

Query: 82  VLELRGRNPSQVKELNLDNCRSTNIV 159
           ++ L+  NP + KE NLD  +++N+V
Sbjct: 347 MIPLQKINPGERKEFNLDLIKNSNVV 372


>At5g04220.1 68418.m00410 C2 domain-containing protein (sytC) GC
           donor splice site at exon 3; similar to Ca2+-dependent
           lipid-binding protein (CLB1) GI:2789434 from
           [Lycopersicon esculentum]
          Length = 318

 Score = 25.4 bits (53), Expect = 8.8
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = +1

Query: 82  VLELRGRNPSQVKELNLDNCRSTNIV 159
           ++ L+  NP + KE NLD  +++N+V
Sbjct: 125 MIPLQKINPGERKEFNLDLIKNSNVV 150


>At3g19700.1 68416.m02495 leucine-rich repeat transmembrane protein
           kinase, putative similar to leucine-rich receptor-like
           protein kinase GB:AAC36318 from [Malus domestica];
           contains leucine rich repeat (LRR) domains,
           Pfam:PF00560; contains protein kinase domain,
           Pfam:PF00069
          Length = 991

 Score = 25.4 bits (53), Expect = 8.8
 Identities = 11/17 (64%), Positives = 15/17 (88%)
 Frame = +3

Query: 237 KHLPKLRKLELSDNRIS 287
           K+L +L+ LELSDN+IS
Sbjct: 218 KNLVRLQNLELSDNQIS 234


>At2g48030.1 68415.m06012 endonuclease/exonuclease/phosphatase
           family protein contains Pfam profile PF03372:
           Endonuclease/Exonuclease/phosphatase family
          Length = 438

 Score = 25.4 bits (53), Expect = 8.8
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = +3

Query: 213 SYKSKRFPKHLPKLRKLELSDNRISNGAEFSQ 308
           S K +RF K  P+   + L DN IS    F +
Sbjct: 106 SRKQQRFAKSRPRRVSINLPDNEISRQLSFRE 137


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,750,962
Number of Sequences: 28952
Number of extensions: 126212
Number of successful extensions: 406
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 391
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 406
length of database: 12,070,560
effective HSP length: 71
effective length of database: 10,014,968
effective search space used: 360538848
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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