Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_A16
         (500 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D87467-1|BAA13406.2|  583|Homo sapiens KIAA0277 protein.               30   3.9  
BC039203-1|AAH39203.1|  444|Homo sapiens RAPGEF5 protein protein.      30   3.9  

>D87467-1|BAA13406.2|  583|Homo sapiens KIAA0277 protein.
          Length = 583

 Score = 30.3 bits (65), Expect = 3.9
 Identities = 16/47 (34%), Positives = 26/47 (55%)
 Frame = -3

Query: 150 PIRNDAAR*HRPSLSDNWARARGTVTHLLYYYYDIFVRSLQHSTVYV 10
           P + + A  H+ SL +NW + RGTVT     +  +++   +HS V V
Sbjct: 216 PQKKNKALFHQFSLKENWLQHRGTVTETEEIFCHVYI--TEHSYVSV 260


>BC039203-1|AAH39203.1|  444|Homo sapiens RAPGEF5 protein protein.
          Length = 444

 Score = 30.3 bits (65), Expect = 3.9
 Identities = 16/47 (34%), Positives = 26/47 (55%)
 Frame = -3

Query: 150 PIRNDAAR*HRPSLSDNWARARGTVTHLLYYYYDIFVRSLQHSTVYV 10
           P + + A  H+ SL +NW + RGTVT     +  +++   +HS V V
Sbjct: 213 PQKKNKALFHQFSLKENWLQHRGTVTETEEIFCHVYI--TEHSYVSV 257


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,900,619
Number of Sequences: 237096
Number of extensions: 953089
Number of successful extensions: 1485
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1466
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1485
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4593178062
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)