Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_A16
         (500 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       23   1.8  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    23   2.4  
AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory...    21   7.2  
AF134818-1|AAD40234.1|  130|Apis mellifera lambda crystallin-lik...    21   7.2  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        21   9.5  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        21   9.5  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        21   9.5  

>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 11/46 (23%), Positives = 25/46 (54%)
 Frame = -2

Query: 256 HILYPSRSIRWLKSF*VYLER*SRTRRMNCELKGLTNQKRRGTLTS 119
           HIL P++   +++   +YL++  +    +   +  +NQ+R G  +S
Sbjct: 81  HILSPTQLQSFMQQHSLYLQQQQQQHHQDSSSEHASNQERFGYFSS 126


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = -1

Query: 71  IYYTITTIFLFVPCNILQFTFYN 3
           I Y+  + F ++PC I+ F +YN
Sbjct: 344 IIYSSLSSF-YIPCIIMVFLYYN 365


>AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory
           receptor 2 protein.
          Length = 210

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = -1

Query: 134 RHANIVRLCPTTGQEREGRLHIYYTITTIFL 42
           RH +IVRL    G      L ++   TTI L
Sbjct: 109 RHKHIVRLVTAIGDAYGVALLLHMLTTTITL 139


>AF134818-1|AAD40234.1|  130|Apis mellifera lambda crystallin-like
           protein protein.
          Length = 130

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = -3

Query: 381 IKYIFIFFIESLNLDMERLFNYTRAYK 301
           ++Y F+   E+ +L+ E +  Y   YK
Sbjct: 45  MRYAFLGAFEAAHLNAEGMKKYCETYK 71


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +2

Query: 404 IWCLAKKIMFLISFI 448
           IW LA  ++F+ SF+
Sbjct: 7   IWTLAVNVLFVNSFL 21


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +2

Query: 404 IWCLAKKIMFLISFI 448
           IW LA  ++F+ SF+
Sbjct: 7   IWTLAVNVLFVNSFL 21


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +2

Query: 404 IWCLAKKIMFLISFI 448
           IW LA  ++F+ SF+
Sbjct: 7   IWTLAVNVLFVNSFL 21


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,067
Number of Sequences: 438
Number of extensions: 2323
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13741392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)