Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_A15
         (583 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8BNG4 Cluster: 9 days embryo whole body cDNA, RIKEN fu...    37   0.40 
UniRef50_UPI00015A6423 Cluster: dystrobrevin, beta; n=3; Danio r...    36   0.53 
UniRef50_UPI00004D9789 Cluster: Dystrobrevin beta (Beta-dystrobr...    36   0.70 
UniRef50_Q96AW0 Cluster: Dystrobrevin, beta; n=7; Euteleostomi|R...    35   1.2  
UniRef50_O60941 Cluster: Dystrobrevin beta; n=68; Euteleostomi|R...    35   1.2  
UniRef50_A1SMA5 Cluster: DNA ligase, NAD-dependent precursor; n=...    34   2.1  
UniRef50_A7AN67 Cluster: ATPase domain containing protein; n=1; ...    34   2.8  
UniRef50_Q0M334 Cluster: Trans-aconitate 2-methyltransferase; n=...    33   3.7  

>UniRef50_Q8BNG4 Cluster: 9 days embryo whole body cDNA, RIKEN
           full-length enriched library, clone:D030074O22
           product:dystrobrevin, beta, full insert sequence; n=9;
           Coelomata|Rep: 9 days embryo whole body cDNA, RIKEN
           full-length enriched library, clone:D030074O22
           product:dystrobrevin, beta, full insert sequence - Mus
           musculus (Mouse)
          Length = 301

 Score = 36.7 bits (81), Expect = 0.40
 Identities = 16/31 (51%), Positives = 19/31 (61%)
 Frame = -2

Query: 123 PLPTFPGFSLGRLDHLVRKCIPLQKKIVLNV 31
           P   F G S G  +H VR C P QKKI+LN+
Sbjct: 178 PTAVFEGPSFGYTEHAVRTCFPQQKKIMLNM 208


>UniRef50_UPI00015A6423 Cluster: dystrobrevin, beta; n=3; Danio
           rerio|Rep: dystrobrevin, beta - Danio rerio
          Length = 592

 Score = 36.3 bits (80), Expect = 0.53
 Identities = 17/37 (45%), Positives = 21/37 (56%)
 Frame = -2

Query: 144 VRDFHTSPLPTFPGFSLGRLDHLVRKCIPLQKKIVLN 34
           +R+    P   F G S G  +H VR C P QKKI+LN
Sbjct: 182 LREVLKLPTAVFEGPSFGYTEHSVRTCFPQQKKILLN 218


>UniRef50_UPI00004D9789 Cluster: Dystrobrevin beta
           (Beta-dystrobrevin) (DTN-B).; n=2; Deuterostomia|Rep:
           Dystrobrevin beta (Beta-dystrobrevin) (DTN-B). - Xenopus
           tropicalis
          Length = 448

 Score = 35.9 bits (79), Expect = 0.70
 Identities = 22/57 (38%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
 Frame = -2

Query: 198 FSSVSP-TLIWCVTASHTCVRDFHTSPLPTFPGFSLGRLDHLVRKCIPLQKKIVLNV 31
           FS VS  T +   T     +R+    P   F G S G  +H  R C P QKKI LN+
Sbjct: 41  FSQVSDSTGLMVYTKFDQFLREVLKLPTTVFEGPSFGYTEHSARTCFPPQKKIALNM 97


>UniRef50_Q96AW0 Cluster: Dystrobrevin, beta; n=7; Euteleostomi|Rep:
           Dystrobrevin, beta - Homo sapiens (Human)
          Length = 560

 Score = 35.1 bits (77), Expect = 1.2
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = -2

Query: 123 PLPTFPGFSLGRLDHLVRKCIPLQKKIVLNV 31
           P   F G S G  +H VR C P Q+KI+LN+
Sbjct: 178 PTAVFEGPSFGYTEHSVRTCFPQQRKIMLNM 208


>UniRef50_O60941 Cluster: Dystrobrevin beta; n=68; Euteleostomi|Rep:
           Dystrobrevin beta - Homo sapiens (Human)
          Length = 627

 Score = 35.1 bits (77), Expect = 1.2
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = -2

Query: 123 PLPTFPGFSLGRLDHLVRKCIPLQKKIVLNV 31
           P   F G S G  +H VR C P Q+KI+LN+
Sbjct: 178 PTAVFEGPSFGYTEHSVRTCFPQQRKIMLNM 208


>UniRef50_A1SMA5 Cluster: DNA ligase, NAD-dependent precursor; n=1;
           Nocardioides sp. JS614|Rep: DNA ligase, NAD-dependent
           precursor - Nocardioides sp. (strain BAA-499 / JS614)
          Length = 752

 Score = 34.3 bits (75), Expect = 2.1
 Identities = 17/30 (56%), Positives = 21/30 (70%)
 Frame = -2

Query: 315 KL*VIKVILGQRGRVRCYAVLHPRKVAGGT 226
           KL  I+V +G+ GRV  YAV+ P KVAG T
Sbjct: 383 KLLEIRVNVGRTGRVTPYAVMEPTKVAGST 412


>UniRef50_A7AN67 Cluster: ATPase domain containing protein; n=1;
           Babesia bovis|Rep: ATPase domain containing protein -
           Babesia bovis
          Length = 874

 Score = 33.9 bits (74), Expect = 2.8
 Identities = 16/47 (34%), Positives = 23/47 (48%)
 Frame = -2

Query: 222 GFSG*CWRFSSVSPTLIWCVTASHTCVRDFHTSPLPTFPGFSLGRLD 82
           G  G CWR    +  L+   ++S   V   H+S L  F  F +GRL+
Sbjct: 737 GLGGACWRSLPATLLLMMLTSSSEHMVTSDHSSLLEVFTSFDMGRLE 783


>UniRef50_Q0M334 Cluster: Trans-aconitate 2-methyltransferase; n=1;
           Caulobacter sp. K31|Rep: Trans-aconitate
           2-methyltransferase - Caulobacter sp. K31
          Length = 258

 Score = 33.5 bits (73), Expect = 3.7
 Identities = 19/67 (28%), Positives = 28/67 (41%)
 Frame = +1

Query: 88  PTQGEPRECWKWGCVKVSHASVRGCHTPD*CGTHRREAPTLPTKPTGSSRHLPWVQYGIA 267
           P   EPRE W  GC    HA++     P+        +P +  +   S   + WV   IA
Sbjct: 28  PRDLEPREIWDLGCGAGEHAALLAARHPNARVHGLDSSPEMLARGRASRGDVDWVLGDIA 87

Query: 268 THSTALP 288
           T +  +P
Sbjct: 88  TFAPEIP 94


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 673,756,216
Number of Sequences: 1657284
Number of extensions: 14987629
Number of successful extensions: 35798
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 34646
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35792
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 40404161459
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)