Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_A15
         (583 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL033514-6|CAA22096.2|  373|Caenorhabditis elegans Hypothetical ...    31   0.60 
Z98877-5|CAD56616.1|  731|Caenorhabditis elegans Hypothetical pr...    27   9.7  
Z98877-4|CAB54473.2|  796|Caenorhabditis elegans Hypothetical pr...    27   9.7  
AF039048-9|AAB94233.1|  362|Caenorhabditis elegans Hypothetical ...    27   9.7  
AF039048-8|AAT68896.1|  367|Caenorhabditis elegans Hypothetical ...    27   9.7  

>AL033514-6|CAA22096.2|  373|Caenorhabditis elegans Hypothetical
           protein Y75B8A.6 protein.
          Length = 373

 Score = 31.1 bits (67), Expect = 0.60
 Identities = 18/49 (36%), Positives = 25/49 (51%)
 Frame = +3

Query: 57  GECIYALDGPTYPGRTPGMLEVGMCESLSRKCERLSHTRLVWDSPTRSA 203
           G+C Y  D P + G  PG+ +    E   R+C R+   RL  D+PT  A
Sbjct: 99  GQCTYCQDSPQFGG--PGVKKQSCIE---RRCLRVLENRLQRDAPTFKA 142


>Z98877-5|CAD56616.1|  731|Caenorhabditis elegans Hypothetical
           protein Y69H2.3c protein.
          Length = 731

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -2

Query: 162 TASHTCVRDFHTSPLPTFPG 103
           T   TCV D+  +P P FPG
Sbjct: 245 TGKPTCVPDYSDTPSPLFPG 264


>Z98877-4|CAB54473.2|  796|Caenorhabditis elegans Hypothetical
           protein Y69H2.3b protein.
          Length = 796

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -2

Query: 162 TASHTCVRDFHTSPLPTFPG 103
           T   TCV D+  +P P FPG
Sbjct: 310 TGKPTCVPDYSDTPSPLFPG 329


>AF039048-9|AAB94233.1|  362|Caenorhabditis elegans Hypothetical
           protein F16B4.2a protein.
          Length = 362

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 13/26 (50%), Positives = 20/26 (76%)
 Frame = -2

Query: 99  SLGRLDHLVRKCIPLQKKIVLNVSDN 22
           S+ R+D L ++ I L+KK V+N+SDN
Sbjct: 91  SILRID-LAKRKIRLRKKFVMNISDN 115


>AF039048-8|AAT68896.1|  367|Caenorhabditis elegans Hypothetical
           protein F16B4.2b protein.
          Length = 367

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 13/26 (50%), Positives = 20/26 (76%)
 Frame = -2

Query: 99  SLGRLDHLVRKCIPLQKKIVLNVSDN 22
           S+ R+D L ++ I L+KK V+N+SDN
Sbjct: 91  SILRID-LAKRKIRLRKKFVMNISDN 115


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,481,799
Number of Sequences: 27780
Number of extensions: 357593
Number of successful extensions: 788
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 751
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 788
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1215936170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)